RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 CCDC178Q5BJE1 867 aa23.99■■□□□ 1.43
PRDM4-205ENST00000550376 SERTAD1Q9UHV2 236 aa23.99■■□□□ 1.43
PRDM4-205ENST00000550376 TOP1P11387 765 aaKnown RBP23.98■■□□□ 1.43
PRDM4-205ENST00000550376 KRBA2Q6ZNG9 492 aa23.98■■□□□ 1.43
PRDM4-205ENST00000550376 NRBP1Q9UHY1 535 aa23.98■■□□□ 1.43
PRDM4-205ENST00000550376 RAD21O60216 631 aa23.98■■□□□ 1.43
PRDM4-205ENST00000550376 SF3B2Q13435 895 aaKnown RBP23.98■■□□□ 1.43
PRDM4-205ENST00000550376 BLIDQ8IZY5 108 aa23.98■■□□□ 1.43
PRDM4-205ENST00000550376 ZDHHC15Q96MV8 337 aa23.98■■□□□ 1.43
PRDM4-205ENST00000550376 TDRD3Q9H7E2 651 aaKnown RBP23.98■■□□□ 1.43
PRDM4-205ENST00000550376 A0A087X0B3 334 aa23.98■■□□□ 1.43
PRDM4-205ENST00000550376 VWA3AA6NCI4 1184 aa23.98■■□□□ 1.43
PRDM4-205ENST00000550376 C17orf53Q8N3J3 647 aaPredicted RBP23.98■■□□□ 1.43
PRDM4-205ENST00000550376 PIGSQ96S52 555 aa23.98■■□□□ 1.43
PRDM4-205ENST00000550376 GPCPD1Q9NPB8 672 aa23.98■■□□□ 1.43
PRDM4-205ENST00000550376 FAM198AQ9UFP1 575 aa23.98■■□□□ 1.43
PRDM4-205ENST00000550376 PRR29P0C7W0 189 aa23.97■■□□□ 1.43
PRDM4-205ENST00000550376 CEP57L1Q8IYX8 460 aa23.97■■□□□ 1.43
PRDM4-205ENST00000550376 DNAJC18Q9H819 358 aa23.97■■□□□ 1.43
PRDM4-205ENST00000550376 ZNF277Q9NRM2 450 aaPredicted RBP23.97■■□□□ 1.43
PRDM4-205ENST00000550376 CEP131Q9UPN4 1083 aa23.97■■□□□ 1.43
PRDM4-205ENST00000550376 RAD17O75943 681 aa23.97■■□□□ 1.43
PRDM4-205ENST00000550376 GNAQP50148 359 aa23.97■■□□□ 1.43
PRDM4-205ENST00000550376 KIAA2012Q0VF49 1180 aa23.97■■□□□ 1.43
PRDM4-205ENST00000550376 SH3BP5LQ7L8J4 393 aa23.97■■□□□ 1.43
PRDM4-205ENST00000550376 DRC7Q8IY82 874 aa23.97■■□□□ 1.43
PRDM4-205ENST00000550376 PCDHA5Q9Y5H7 936 aa23.97■■□□□ 1.43
PRDM4-205ENST00000550376 FAM237AA0A1B0GTK4 181 aa23.96■■□□□ 1.43
PRDM4-205ENST00000550376 STXBP3O00186 592 aa23.96■■□□□ 1.43
PRDM4-205ENST00000550376 DPEP1P16444 411 aa23.96■■□□□ 1.43
PRDM4-205ENST00000550376 CDC25AP30304 524 aa23.96■■□□□ 1.43
PRDM4-205ENST00000550376 FAM13BQ9NYF5 915 aa23.96■■□□□ 1.43
PRDM4-205ENST00000550376 PDHBP11177 359 aa23.96■■□□□ 1.43
PRDM4-205ENST00000550376 CASP1P29466 404 aa23.96■■□□□ 1.43
PRDM4-205ENST00000550376 PCDHA4Q9UN74 947 aa23.96■■□□□ 1.43
PRDM4-205ENST00000550376 ZNF75DP51815 510 aa23.95■■□□□ 1.42
PRDM4-205ENST00000550376 IL17AQ16552 155 aa23.95■■□□□ 1.42
PRDM4-205ENST00000550376 DHX58Q96C10 678 aa23.95■■□□□ 1.42
PRDM4-205ENST00000550376 PRMT6Q96LA8 375 aaPredicted RBP23.95■■□□□ 1.42
PRDM4-205ENST00000550376 TIGD1Q96MW7 591 aa23.95■■□□□ 1.42
PRDM4-205ENST00000550376 BAG6P46379 1132 aa23.95■■□□□ 1.42
PRDM4-205ENST00000550376 SYMPKQ92797 1274 aaKnown RBP23.95■■□□□ 1.42
PRDM4-205ENST00000550376 BARHL2Q9NY43 387 aa23.95■■□□□ 1.42
PRDM4-205ENST00000550376 PCDHA6Q9UN73 950 aa23.95■■□□□ 1.42
PRDM4-205ENST00000550376 PCDHA8Q9Y5H6 950 aa23.95■■□□□ 1.42
PRDM4-205ENST00000550376 ZBTB7AO95365 584 aa23.94■■□□□ 1.42
PRDM4-205ENST00000550376 NLRP12P59046 1061 aa23.94■■□□□ 1.42
PRDM4-205ENST00000550376 INF2Q27J81 1249 aa23.94■■□□□ 1.42
PRDM4-205ENST00000550376 TTBK2Q6IQ55 1244 aa23.94■■□□□ 1.42
PRDM4-205ENST00000550376 TTLL6Q8N841 843 aa23.94■■□□□ 1.42
PRDM4-205ENST00000550376 ZBTB12Q9Y330 459 aaPredicted RBP23.94■■□□□ 1.42
PRDM4-205ENST00000550376 HLA-DOAP06340 250 aa23.94■■□□□ 1.42
PRDM4-205ENST00000550376 SLC16A2P36021 539 aa23.94■■□□□ 1.42
PRDM4-205ENST00000550376 STAMQ92783 540 aa23.94■■□□□ 1.42
PRDM4-205ENST00000550376 KCNA3P22001 575 aa23.93■■□□□ 1.42
PRDM4-205ENST00000550376 NAPAP54920 295 aa23.93■■□□□ 1.42
PRDM4-205ENST00000550376 MDM2Q00987 491 aaPredicted RBP23.93■■□□□ 1.42
PRDM4-205ENST00000550376 BMP6P22004 513 aa23.93■■□□□ 1.42
PRDM4-205ENST00000550376 PLA2G4DQ86XP0 818 aa23.93■■□□□ 1.42
PRDM4-205ENST00000550376 PTGS1P23219 599 aa23.92■■□□□ 1.42
PRDM4-205ENST00000550376 CALML3P27482 149 aa23.92■■□□□ 1.42
PRDM4-205ENST00000550376 AFMP43652 599 aa23.92■■□□□ 1.42
PRDM4-205ENST00000550376 CFAP100Q494V2 611 aa23.92■■□□□ 1.42
PRDM4-205ENST00000550376 COA7Q96BR5 231 aa23.92■■□□□ 1.42
PRDM4-205ENST00000550376 CAVIN2O95810 425 aa23.92■■□□□ 1.42
PRDM4-205ENST00000550376 KCTD1Q719H9 257 aa23.92■■□□□ 1.42
PRDM4-205ENST00000550376 KCNF1Q9H3M0 494 aa23.92■■□□□ 1.42
PRDM4-205ENST00000550376 TUBE1Q9UJT0 475 aa23.92■■□□□ 1.42
PRDM4-205ENST00000550376 IGKV6D-41A0A0C4DH26 115 aa23.91■■□□□ 1.42
PRDM4-205ENST00000550376 CCDC194A0A1B0GVG4 234 aa23.91■■□□□ 1.42
PRDM4-205ENST00000550376 M0R2N6 131 aa23.91■■□□□ 1.42
PRDM4-205ENST00000550376 TTLL1O95922 423 aa23.91■■□□□ 1.42
PRDM4-205ENST00000550376 NOVP48745 357 aa23.91■■□□□ 1.42
PRDM4-205ENST00000550376 ZNF579Q8NAF0 562 aaKnown RBP23.91■■□□□ 1.42
PRDM4-205ENST00000550376 RRP36Q96EU6 259 aaKnown RBP23.91■■□□□ 1.42
PRDM4-205ENST00000550376 NAT10Q9H0A0 1025 aaKnown RBP23.91■■□□□ 1.42
PRDM4-205ENST00000550376 ATF5Q9Y2D1 282 aaPredicted RBP23.91■■□□□ 1.42
PRDM4-205ENST00000550376 SMCO2A6NFE2 343 aa23.91■■□□□ 1.42
PRDM4-205ENST00000550376 GDF11O95390 407 aa23.91■■□□□ 1.42
PRDM4-205ENST00000550376 NT5C2P49902 561 aa23.91■■□□□ 1.42
PRDM4-205ENST00000550376 CCDC186Q7Z3E2 898 aa23.91■■□□□ 1.42
PRDM4-205ENST00000550376 SPZ1Q9BXG8 430 aa23.91■■□□□ 1.42
PRDM4-205ENST00000550376 SH3GLB2Q9NR46 395 aa23.91■■□□□ 1.42
PRDM4-205ENST00000550376 PPP1R1BQ9UD71 204 aaPredicted RBP23.91■■□□□ 1.42
PRDM4-205ENST00000550376 CLRN2A0PK11 232 aa23.9■■□□□ 1.42
PRDM4-205ENST00000550376 ACTN4O43707 911 aaKnown RBP23.9■■□□□ 1.42
PRDM4-205ENST00000550376 ATP2C1P98194 919 aaPredicted RBP23.9■■□□□ 1.42
PRDM4-205ENST00000550376 POSTNQ15063 836 aa23.9■■□□□ 1.42
PRDM4-205ENST00000550376 HSP90AA4PQ58FG1 418 aa23.9■■□□□ 1.42
PRDM4-205ENST00000550376 LARGE2Q8N3Y3 721 aa23.9■■□□□ 1.42
PRDM4-205ENST00000550376 SCAF8Q9UPN6 1271 aaKnown RBP23.9■■□□□ 1.42
PRDM4-205ENST00000550376 TMEM60Q9H2L4 133 aa23.89■■□□□ 1.42
PRDM4-205ENST00000550376 TMEM260Q9NX78 707 aa23.89■■□□□ 1.42
PRDM4-205ENST00000550376 BIN2Q9UBW5 565 aaPredicted RBP23.89■■□□□ 1.42
PRDM4-205ENST00000550376 SEC63Q9UGP8 760 aaKnown RBP23.89■■□□□ 1.42
PRDM4-205ENST00000550376 SWAP70Q9UH65 585 aa23.89■■□□□ 1.42
PRDM4-205ENST00000550376 FOCADQ5VW36 1801 aa23.89■■□□□ 1.41
PRDM4-205ENST00000550376 LMOD1P29536 600 aaPredicted RBP23.89■■□□□ 1.41
PRDM4-205ENST00000550376 CCDC144BQ3MJ40 725 aa23.89■■□□□ 1.41
PRDM4-205ENST00000550376 LZTS2Q9BRK4 669 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms