RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 GOPCQ9HD26 462 aa16.81■□□□□ 0.28
CUX1-214ENST00000550008 SLC39A2Q9NP94 309 aa16.81■□□□□ 0.28
CUX1-214ENST00000550008 TRPC5Q9UL62 973 aaPredicted RBP16.81■□□□□ 0.28
CUX1-214ENST00000550008 CCDC65Q8IXS2 484 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 ENAHQ8N8S7 591 aaPredicted RBP16.8■□□□□ 0.28
CUX1-214ENST00000550008 FAM84BQ96KN1 310 aaPredicted RBP16.8■□□□□ 0.28
CUX1-214ENST00000550008 CCDC113Q9H0I3 377 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 SAMSN1Q9NSI8 373 aaKnown RBP16.8■□□□□ 0.28
CUX1-214ENST00000550008 KIFC2Q96AC6 838 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.8■□□□□ 0.288e-7■■■■■ 154.8
CUX1-214ENST00000550008 CWC15Q9P013 229 aaKnown RBP16.8■□□□□ 0.28
CUX1-214ENST00000550008 NARFQ9UHQ1 456 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 FAM196BA6NMK8 535 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 TACC1O75410 805 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 ALDH1B1P30837 517 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 DDIT3P35638 169 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 LMAN1P49257 510 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 MAP9Q49MG5 647 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 STXBP4Q6ZWJ1 553 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 UTYO14607 1347 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 PPP6R2O75170 966 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 KRT83P78385 493 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 CNNM4Q6P4Q7 775 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 HS2ST1Q7LGA3 356 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 PIGSQ96S52 555 aa16.8■□□□□ 0.28
CUX1-214ENST00000550008 ITSN1Q15811 1721 aa16.79■□□□□ 0.28
CUX1-214ENST00000550008 TSGA10IPQ3SY00 556 aa16.79■□□□□ 0.28
CUX1-214ENST00000550008 KIAA1524Q8TCG1 905 aa16.79■□□□□ 0.28
CUX1-214ENST00000550008 GOLGA1Q92805 767 aa16.79■□□□□ 0.28
CUX1-214ENST00000550008 MYCNP04198 464 aaPredicted RBP16.79■□□□□ 0.28
CUX1-214ENST00000550008 NEK8Q86SG6 692 aa16.79■□□□□ 0.28
CUX1-214ENST00000550008 PSTPIP2Q9H939 334 aa16.79■□□□□ 0.28
CUX1-214ENST00000550008 GDF11O95390 407 aa16.79■□□□□ 0.28
CUX1-214ENST00000550008 CSF1RP07333 972 aa16.79■□□□□ 0.28
CUX1-214ENST00000550008 PPP2R3AQ06190 1150 aa16.79■□□□□ 0.28
CUX1-214ENST00000550008 DCP1AQ9NPI6 582 aaPredicted RBP16.79■□□□□ 0.28
CUX1-214ENST00000550008 UBE2Q2LH0YL09 131 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 PPEF1O14829 653 aaPredicted RBP16.78■□□□□ 0.28
CUX1-214ENST00000550008 OR52Z1P0C646 297 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 CYP4A11Q02928 519 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 GRAPQ13588 217 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 ERCC6LQ2NKX8 1250 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 PRR16Q569H4 304 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 NSMFQ6X4W1 530 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 GRAPLQ8TC17 118 aaPredicted RBP16.78■□□□□ 0.28
CUX1-214ENST00000550008 ADGRB2O60241 1585 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 UBN2Q6ZU65 1347 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 DLGAP5Q15398 846 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 CERKLQ49MI3 558 aaPredicted RBP16.78■□□□□ 0.28
CUX1-214ENST00000550008 LZTS2Q9BRK4 669 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 THRAP3Q9Y2W1 955 aaKnown RBP16.78■□□□□ 0.28
CUX1-214ENST00000550008 SEMA3EO15041 775 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 FOXN1O15353 648 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 MORC3Q14149 939 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 EHBP1Q8NDI1 1231 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 ERO1AQ96HE7 468 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 MAN1B1Q9UKM7 699 aa16.78■□□□□ 0.28
CUX1-214ENST00000550008 KDM6AO15550 1401 aaPredicted RBP16.78■□□□□ 0.28
CUX1-214ENST00000550008 KCNJ18B7U540 433 aa16.77■□□□□ 0.28
CUX1-214ENST00000550008 ANTXR2P58335 489 aa16.77■□□□□ 0.28
CUX1-214ENST00000550008 KCNJ12Q14500 433 aa16.77■□□□□ 0.28
CUX1-214ENST00000550008 STAG1Q8WVM7 1258 aa16.77■□□□□ 0.28
CUX1-214ENST00000550008 MYCLP12524 364 aaPredicted RBP16.77■□□□□ 0.28
CUX1-214ENST00000550008 PPARDQ03181 441 aa16.77■□□□□ 0.28
CUX1-214ENST00000550008 RGS22Q8NE09 1264 aa16.77■□□□□ 0.28
CUX1-214ENST00000550008 PLEKHA4Q9H4M7 779 aa16.77■□□□□ 0.28
CUX1-214ENST00000550008 PCDHA12Q9UN75 941 aa16.77■□□□□ 0.28
CUX1-214ENST00000550008 ZNF34Q8IZ26 560 aa16.77■□□□□ 0.27
CUX1-214ENST00000550008 RDH13Q8NBN7 331 aa16.77■□□□□ 0.27
CUX1-214ENST00000550008 HINFPQ9BQA5 517 aa16.77■□□□□ 0.27
CUX1-214ENST00000550008 TCHPQ9BT92 498 aa16.77■□□□□ 0.27
CUX1-214ENST00000550008 PCDHA1Q9Y5I3 950 aa16.77■□□□□ 0.27
CUX1-214ENST00000550008 FAM205CA6NFA0 338 aa16.77■□□□□ 0.27
CUX1-214ENST00000550008 CAMTA2O94983 1202 aa16.77■□□□□ 0.27
CUX1-214ENST00000550008 RPN1P04843 607 aaKnown RBP16.77■□□□□ 0.27
CUX1-214ENST00000550008 KRT13P13646 458 aa16.77■□□□□ 0.27
CUX1-214ENST00000550008 UBXN2AP68543 259 aa16.77■□□□□ 0.27
CUX1-214ENST00000550008 CACNB1Q02641 598 aaPredicted RBP16.77■□□□□ 0.27
CUX1-214ENST00000550008 ICA1Q05084 483 aa16.77■□□□□ 0.27
CUX1-214ENST00000550008 CTR9Q6PD62 1173 aa16.77■□□□□ 0.27
CUX1-214ENST00000550008 MMP10P09238 476 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 NLGN1Q8N2Q7 840 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 ARHGEF10LQ9HCE6 1279 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 SERPINB13Q9UIV8 391 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 SIGLEC1Q9BZZ2 1709 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 AK9Q5TCS8 1911 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 BACH1O14867 736 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 CTDNEP1O95476 244 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 PDE6BP35913 854 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 KRT27Q7Z3Y8 459 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 PXDNLA1KZ92 1463 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 TMEM110-MUSTN1A8MSY1 372 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 NFIXQ14938 502 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 PTPROQ16827 1216 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 SLFN13Q68D06 897 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 PPP4R3AQ6IN85 833 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 FMR1NBQ8N0W7 255 aaPredicted RBP16.76■□□□□ 0.27
CUX1-214ENST00000550008 TBCKQ8TEA7 893 aa16.76■□□□□ 0.27
CUX1-214ENST00000550008 WDHD1O75717 1129 aaPredicted RBP16.75■□□□□ 0.27
CUX1-214ENST00000550008 SNAP25P60880 206 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms