RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 NR2E3Q9Y5X4 410 aa28.73■■■□□ 2.19
USP44-205ENST00000549639 PLIN4Q96Q06 1357 aa28.73■■■□□ 2.19
USP44-205ENST00000549639 ZNF236Q9UL36 1845 aa28.72■■■□□ 2.19
USP44-205ENST00000549639 RAD21O60216 631 aa28.72■■■□□ 2.19
USP44-205ENST00000549639 PRDM1O75626 825 aa28.72■■■□□ 2.19
USP44-205ENST00000549639 PLS1Q14651 629 aa28.72■■■□□ 2.19
USP44-205ENST00000549639 FAM83BQ5T0W9 1011 aa28.72■■■□□ 2.19
USP44-205ENST00000549639 DPP9Q86TI2 863 aa28.72■■■□□ 2.19
USP44-205ENST00000549639 NEDD1Q8NHV4 660 aa28.72■■■□□ 2.19
USP44-205ENST00000549639 EXOC6Q8TAG9 804 aa28.72■■■□□ 2.19
USP44-205ENST00000549639 MTMR4Q9NYA4 1195 aa28.72■■■□□ 2.19
USP44-205ENST00000549639 CLIP2Q9UDT6 1046 aa28.72■■■□□ 2.19
USP44-205ENST00000549639 PARP14Q460N5 1801 aa28.71■■■□□ 2.19
USP44-205ENST00000549639 F5H6K3 240 aa28.71■■■□□ 2.19
USP44-205ENST00000549639 TTLL1O95922 423 aa28.71■■■□□ 2.19
USP44-205ENST00000549639 TSPY3P0CV98 308 aa28.71■■■□□ 2.19
USP44-205ENST00000549639 TSPY8P0CW00 308 aa28.71■■■□□ 2.19
USP44-205ENST00000549639 COPB2P35606 906 aa28.71■■■□□ 2.19
USP44-205ENST00000549639 KLRC3Q07444 240 aa28.71■■■□□ 2.19
USP44-205ENST00000549639 CHD1LQ86WJ1 897 aa28.71■■■□□ 2.19
USP44-205ENST00000549639 NCAPG2Q86XI2 1143 aa28.71■■■□□ 2.19
USP44-205ENST00000549639 PAWRQ96IZ0 340 aaKnown RBP28.71■■■□□ 2.19
USP44-205ENST00000549639 H0YGN5 161 aa28.7■■■□□ 2.18
USP44-205ENST00000549639 VWA5AO00534 786 aa28.7■■■□□ 2.18
USP44-205ENST00000549639 ADORA2AP29274 412 aa28.7■■■□□ 2.18
USP44-205ENST00000549639 NUCB1Q02818 461 aa28.7■■■□□ 2.18
USP44-205ENST00000549639 TMEM132BQ14DG7 1078 aa28.7■■■□□ 2.18
USP44-205ENST00000549639 ALX1Q15699 326 aa28.69■■■□□ 2.18
USP44-205ENST00000549639 MCMDC2Q4G0Z9 681 aa28.69■■■□□ 2.18
USP44-205ENST00000549639 OLFML2BQ68BL8 750 aa28.69■■■□□ 2.18
USP44-205ENST00000549639 B4GALNT3Q6L9W6 998 aa28.69■■■□□ 2.18
USP44-205ENST00000549639 SAMD1Q6SPF0 538 aaPredicted RBP28.69■■■□□ 2.18
USP44-205ENST00000549639 CCDC129Q6ZRS4 1044 aa28.69■■■□□ 2.18
USP44-205ENST00000549639 RIOX2Q8IUF8 465 aa28.69■■■□□ 2.18
USP44-205ENST00000549639 CEP95Q96GE4 821 aa28.69■■■□□ 2.18
USP44-205ENST00000549639 SLF1Q9BQI6 1058 aa28.69■■■□□ 2.18
USP44-205ENST00000549639 NBPF3Q9H094 633 aa28.69■■■□□ 2.18
USP44-205ENST00000549639 OSBPL3Q9H4L5 887 aa28.69■■■□□ 2.18
USP44-205ENST00000549639 FBXO28Q9NVF7 368 aa28.69■■■□□ 2.18
USP44-205ENST00000549639 CEP290O15078 2479 aa28.69■■■□□ 2.18
USP44-205ENST00000549639 NDUFB10O96000 172 aa28.68■■■□□ 2.18
USP44-205ENST00000549639 IGHDP01880 384 aa28.68■■■□□ 2.18
USP44-205ENST00000549639 FCER1AP12319 257 aa28.68■■■□□ 2.18
USP44-205ENST00000549639 GMCL1P1Q8NEA9 526 aa28.68■■■□□ 2.18
USP44-205ENST00000549639 NPLOC4Q8TAT6 608 aa28.68■■■□□ 2.18
USP44-205ENST00000549639 FLRT1Q9NZU1 646 aa28.68■■■□□ 2.18
USP44-205ENST00000549639 ANAPC4Q9UJX5 808 aa28.68■■■□□ 2.18
USP44-205ENST00000549639 TRIM6-TRIM34B2RNG4 842 aa28.67■■■□□ 2.18
USP44-205ENST00000549639 FOXP2O15409 715 aa28.67■■■□□ 2.18
USP44-205ENST00000549639 MSCO60682 206 aa28.67■■■□□ 2.18
USP44-205ENST00000549639 CCND3P30281 292 aaPredicted RBP28.67■■■□□ 2.18
USP44-205ENST00000549639 STAT3P40763 770 aa28.67■■■□□ 2.18
USP44-205ENST00000549639 TFAP4Q01664 338 aa28.67■■■□□ 2.18
USP44-205ENST00000549639 PRPF38AQ8NAV1 312 aaKnown RBP28.67■■■□□ 2.18
USP44-205ENST00000549639 EVI5O60447 810 aa28.66■■■□□ 2.18
USP44-205ENST00000549639 IGHA2P01877 340 aa28.66■■■□□ 2.18
USP44-205ENST00000549639 HABP4Q5JVS0 413 aaKnown RBP28.66■■■□□ 2.18
USP44-205ENST00000549639 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.66■■■□□ 2.18
USP44-205ENST00000549639 MYH4Q9Y623 1939 aa28.65■■■□□ 2.18
USP44-205ENST00000549639 LHX8Q68G74 356 aa28.65■■■□□ 2.18
USP44-205ENST00000549639 PLEKHM2Q8IWE5 1019 aa28.65■■■□□ 2.18
USP44-205ENST00000549639 REPS2Q8NFH8 660 aa28.65■■■□□ 2.18
USP44-205ENST00000549639 DIS3LQ8TF46 1054 aaKnown RBP28.65■■■□□ 2.18
USP44-205ENST00000549639 ZNF214Q9UL59 606 aaPredicted RBP28.65■■■□□ 2.18
USP44-205ENST00000549639 SUPT16HQ9Y5B9 1047 aaKnown RBP28.65■■■□□ 2.18
USP44-205ENST00000549639 MFAP1P55081 439 aaKnown RBP28.64■■■□□ 2.18
USP44-205ENST00000549639 FAM47AQ5JRC9 791 aa28.64■■■□□ 2.18
USP44-205ENST00000549639 VPS53Q5VIR6 699 aa28.64■■■□□ 2.18
USP44-205ENST00000549639 RILPL2Q969X0 211 aa28.64■■■□□ 2.18
USP44-205ENST00000549639 FAM227BQ96M60 508 aa28.64■■■□□ 2.18
USP44-205ENST00000549639 NUP88Q99567 741 aaPredicted RBP28.64■■■□□ 2.18
USP44-205ENST00000549639 C11orf49Q9H6J7 331 aa28.64■■■□□ 2.18
USP44-205ENST00000549639 FEM1BQ9UK73 627 aa28.64■■■□□ 2.18
USP44-205ENST00000549639 ZMYM6O95789 1325 aa28.64■■■□□ 2.17
USP44-205ENST00000549639 A0A0D9SFI3 127 aa28.63■■■□□ 2.17
USP44-205ENST00000549639 TSPY2A6NKD2 308 aa28.63■■■□□ 2.17
USP44-205ENST00000549639 COBLO75128 1261 aa28.63■■■□□ 2.17
USP44-205ENST00000549639 MNX1P50219 401 aaPredicted RBP28.63■■■□□ 2.17
USP44-205ENST00000549639 KCTD2Q14681 263 aa28.63■■■□□ 2.17
USP44-205ENST00000549639 TEX13BQ9BXU2 312 aa28.63■■■□□ 2.17
USP44-205ENST00000549639 COL11A1P12107 1806 aaPredicted RBP28.63■■■□□ 2.17
USP44-205ENST00000549639 ATP2A1O14983 1001 aa28.62■■■□□ 2.17
USP44-205ENST00000549639 ZBED4O75132 1171 aa28.62■■■□□ 2.17
USP44-205ENST00000549639 FDX1P10109 184 aa28.62■■■□□ 2.17
USP44-205ENST00000549639 CYP2C19P33261 490 aa28.62■■■□□ 2.17
USP44-205ENST00000549639 CTDSPL2Q05D32 466 aa28.62■■■□□ 2.17
USP44-205ENST00000549639 MMP19Q99542 508 aa28.62■■■□□ 2.17
USP44-205ENST00000549639 DDX20Q9UHI6 824 aaKnown RBP28.62■■■□□ 2.17
USP44-205ENST00000549639 DIS3Q9Y2L1 958 aaKnown RBP28.62■■■□□ 2.17
USP44-205ENST00000549639 CTDP1Q9Y5B0 961 aaPredicted RBP28.62■■■□□ 2.17
USP44-205ENST00000549639 ORC4O43929 436 aa28.61■■■□□ 2.17
USP44-205ENST00000549639 FGAP02671 866 aa28.61■■■□□ 2.17
USP44-205ENST00000549639 FGRP09769 529 aa28.61■■■□□ 2.17
USP44-205ENST00000549639 CYBAP13498 195 aa28.61■■■□□ 2.17
USP44-205ENST00000549639 NMIQ13287 307 aaPredicted RBP28.61■■■□□ 2.17
USP44-205ENST00000549639 SLFN13Q68D06 897 aa28.61■■■□□ 2.17
USP44-205ENST00000549639 LRRC47Q8N1G4 583 aaKnown RBP28.61■■■□□ 2.17
USP44-205ENST00000549639 COLQQ9Y215 455 aaPredicted RBP28.61■■■□□ 2.17
USP44-205ENST00000549639 HSPD1P10809 573 aaKnown RBP28.6■■■□□ 2.17
USP44-205ENST00000549639 BMP3P12645 472 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms