RNA–Protein interactions for RNA: ENST00000549537.6

TMEM116-208, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TMEM116, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-208ENST00000549537 OSBPL5Q9H0X9 879 aaPredicted RBP8.12□□□□□ -1.11
TMEM116-208ENST00000549537 LRP2BPQ9P2M1 347 aa8.12□□□□□ -1.11
TMEM116-208ENST00000549537 NDUFB9Q9Y6M9 179 aa8.12□□□□□ -1.11
TMEM116-208ENST00000549537 COL6A3P12111 3177 aa8.12□□□□□ -1.11
TMEM116-208ENST00000549537 LAMA3Q16787 3333 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 ATAD5Q96QE3 1844 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 A6NJR5 290 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 CXCL11O14625 94 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 TLR2O60603 784 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 CTNND1O60716 968 aaKnown RBP8.11□□□□□ -1.11
TMEM116-208ENST00000549537 PTPRAP18433 802 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 SP3Q02447 781 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 RRP1BQ14684 758 aaKnown RBP8.11□□□□□ -1.11
TMEM116-208ENST00000549537 TAF1CQ15572 869 aaPredicted RBP8.11□□□□□ -1.11
TMEM116-208ENST00000549537 HSP90AB4PQ58FF6 505 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 MYSM1Q5VVJ2 828 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 GPAT2Q6NUI2 795 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 ANKRD23Q86SG2 305 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 AACSQ86V21 672 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 METTL16Q86W50 562 aaKnown RBP8.11□□□□□ -1.11
TMEM116-208ENST00000549537 ZSCAN29Q8IWY8 852 aaPredicted RBP8.11□□□□□ -1.11
TMEM116-208ENST00000549537 TEX11Q8IYF3 940 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 CD99L2Q8TCZ2 262 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 ERO1AQ96HE7 468 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 ANTXR1Q9H6X2 564 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 ZFYVE28Q9HCC9 887 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 IL1RAPL2Q9NP60 686 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 AATFQ9NY61 560 aaKnown RBP eCLIP8.11□□□□□ -1.11
TMEM116-208ENST00000549537 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.11□□□□□ -1.11
TMEM116-208ENST00000549537 AFG3L2Q9Y4W6 797 aa8.11□□□□□ -1.11
TMEM116-208ENST00000549537 DDX60LQ5H9U9 1706 aaKnown RBP8.11□□□□□ -1.11
TMEM116-208ENST00000549537 LOC285556D6RIA3 1793 aa8.1□□□□□ -1.11
TMEM116-208ENST00000549537 FLT1P17948 1338 aa8.1□□□□□ -1.11
TMEM116-208ENST00000549537 A0A0G2JLL6 359 aaPredicted RBP8.1□□□□□ -1.11
TMEM116-208ENST00000549537 FAM196BA6NMK8 535 aa8.1□□□□□ -1.11
TMEM116-208ENST00000549537 GMPRP36959 345 aa8.1□□□□□ -1.11
TMEM116-208ENST00000549537 C17orf99Q6UX52 265 aa8.1□□□□□ -1.11
TMEM116-208ENST00000549537 PRRT2Q7Z6L0 340 aaPredicted RBP8.1□□□□□ -1.11
TMEM116-208ENST00000549537 KIF1BPQ96EK5 621 aa8.1□□□□□ -1.11
TMEM116-208ENST00000549537 TBC1D2Q9BYX2 928 aa8.1□□□□□ -1.11
TMEM116-208ENST00000549537 DNAJC18Q9H819 358 aa8.1□□□□□ -1.11
TMEM116-208ENST00000549537 TRIM17Q9Y577 477 aa8.1□□□□□ -1.11
TMEM116-208ENST00000549537 ZHX2Q9Y6X8 837 aa8.1□□□□□ -1.11
TMEM116-208ENST00000549537 PDHXO00330 501 aa8.09□□□□□ -1.11
TMEM116-208ENST00000549537 RAB11FIP3O75154 756 aa8.09□□□□□ -1.11
TMEM116-208ENST00000549537 HMMRO75330 724 aa8.09□□□□□ -1.11
TMEM116-208ENST00000549537 BAG3O95817 575 aa8.09□□□□□ -1.11
TMEM116-208ENST00000549537 CYP7A1P22680 504 aa8.09□□□□□ -1.11
TMEM116-208ENST00000549537 CTGFP29279 349 aa8.09□□□□□ -1.11
TMEM116-208ENST00000549537 DYNLL1P63167 89 aaKnown RBP8.09□□□□□ -1.11
TMEM116-208ENST00000549537 JAG1P78504 1218 aa8.09□□□□□ -1.11
TMEM116-208ENST00000549537 TMED8Q6PL24 325 aaPredicted RBP8.09□□□□□ -1.11
TMEM116-208ENST00000549537 CCDC84Q86UT8 332 aaPredicted RBP8.09□□□□□ -1.11
TMEM116-208ENST00000549537 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.09□□□□□ -1.11
TMEM116-208ENST00000549537 TGFBRAP1Q8WUH2 860 aa8.09□□□□□ -1.11
TMEM116-208ENST00000549537 ARHGAP39Q9C0H5 1083 aa8.09□□□□□ -1.11
TMEM116-208ENST00000549537 CHMP4BQ9H444 224 aaKnown RBP8.09□□□□□ -1.11
TMEM116-208ENST00000549537 EFCC1Q9HA90 598 aa8.09□□□□□ -1.11
TMEM116-208ENST00000549537 PICK1Q9NRD5 415 aa8.09□□□□□ -1.11
TMEM116-208ENST00000549537 HERC5Q9UII4 1024 aaKnown RBP8.09□□□□□ -1.11
TMEM116-208ENST00000549537 PTPN22Q9Y2R2 807 aa8.09□□□□□ -1.11
TMEM116-208ENST00000549537 MYH1P12882 1939 aa8.08□□□□□ -1.12
TMEM116-208ENST00000549537 TCRBV5S4A2TA0A5A2 114 aa8.08□□□□□ -1.12
TMEM116-208ENST00000549537 H3BM21 787 aa8.08□□□□□ -1.12
TMEM116-208ENST00000549537 IDH1O75874 414 aaKnown RBP8.08□□□□□ -1.12
TMEM116-208ENST00000549537 CCNYL3P0C7X3 344 aa8.08□□□□□ -1.12
TMEM116-208ENST00000549537 BCRP11274 1271 aa8.08□□□□□ -1.12
TMEM116-208ENST00000549537 CAP2P40123 477 aa8.08□□□□□ -1.12
TMEM116-208ENST00000549537 CLK2P49760 499 aaKnown RBP8.08□□□□□ -1.12
TMEM116-208ENST00000549537 LACTBP83111 547 aaPredicted RBP8.08□□□□□ -1.12
TMEM116-208ENST00000549537 TRIM46Q7Z4K8 759 aa8.08□□□□□ -1.12
TMEM116-208ENST00000549537 MAPKAPK5Q8IW41 473 aa8.08□□□□□ -1.12
TMEM116-208ENST00000549537 CLASRPQ8N2M8 674 aaKnown RBP8.08□□□□□ -1.12
TMEM116-208ENST00000549537 MAGEB6Q8N7X4 407 aa8.08□□□□□ -1.12
TMEM116-208ENST00000549537 MIGA1Q8NAN2 632 aa8.08□□□□□ -1.12
TMEM116-208ENST00000549537 SPIRE2Q8WWL2 714 aa8.08□□□□□ -1.12
TMEM116-208ENST00000549537 HLA-CQ95604 372 aa8.08□□□□□ -1.12
TMEM116-208ENST00000549537 ARMC5Q96C12 935 aa8.08□□□□□ -1.12
TMEM116-208ENST00000549537 RIOK1Q9BRS2 568 aaKnown RBP8.08□□□□□ -1.12
TMEM116-208ENST00000549537 NOL10Q9BSC4 688 aaKnown RBP8.08□□□□□ -1.12
TMEM116-208ENST00000549537 DHX36Q9H2U1 1008 aaKnown RBP8.08□□□□□ -1.12
TMEM116-208ENST00000549537 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.08□□□□□ -1.12
TMEM116-208ENST00000549537 POLR3EQ9NVU0 708 aa8.08□□□□□ -1.12
TMEM116-208ENST00000549537 PI4KBQ9UBF8 816 aa8.08□□□□□ -1.12
TMEM116-208ENST00000549537 SLC45A1Q9Y2W3 748 aa8.08□□□□□ -1.12
TMEM116-208ENST00000549537 TRIM75PA6NK02 468 aa8.07□□□□□ -1.12
TMEM116-208ENST00000549537 IFIT2P09913 472 aaKnown RBP8.07□□□□□ -1.12
TMEM116-208ENST00000549537 CYP2C8P10632 490 aa8.07□□□□□ -1.12
TMEM116-208ENST00000549537 BMP1P13497 986 aa8.07□□□□□ -1.12
TMEM116-208ENST00000549537 PDE6AP16499 860 aa8.07□□□□□ -1.12
TMEM116-208ENST00000549537 ATP5JP18859 108 aa8.07□□□□□ -1.12
TMEM116-208ENST00000549537 MAP3K12Q12852 859 aa8.07□□□□□ -1.12
TMEM116-208ENST00000549537 SHROOM1Q2M3G4 852 aaPredicted RBP8.07□□□□□ -1.12
TMEM116-208ENST00000549537 FASTKD5Q7L8L6 764 aaKnown RBP8.07□□□□□ -1.12
TMEM116-208ENST00000549537 PROCA1Q8NCQ7 364 aaPredicted RBP8.07□□□□□ -1.12
TMEM116-208ENST00000549537 EDC3Q96F86 508 aaKnown RBP8.07□□□□□ -1.12
TMEM116-208ENST00000549537 PARK7Q99497 189 aaKnown RBP8.07□□□□□ -1.12
TMEM116-208ENST00000549537 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.07□□□□□ -1.12
TMEM116-208ENST00000549537 CPA4Q9UI42 421 aa8.07□□□□□ -1.12
TMEM116-208ENST00000549537 PALD1Q9ULE6 856 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms