RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 ATP2B2Q01814 1243 aa18.79■□□□□ 0.6
CHMP1A-206ENST00000549139 GABPAQ06546 454 aa18.79■□□□□ 0.6
CHMP1A-206ENST00000549139 RILPL2Q969X0 211 aa18.79■□□□□ 0.6
CHMP1A-206ENST00000549139 SEC62Q99442 399 aaKnown RBP18.79■□□□□ 0.6
CHMP1A-206ENST00000549139 TTYH1Q9H313 450 aaPredicted RBP18.79■□□□□ 0.6
CHMP1A-206ENST00000549139 PRKAG2Q9UGJ0 569 aa18.79■□□□□ 0.6
CHMP1A-206ENST00000549139 GSG1L2A8MUP6 293 aa18.78■□□□□ 0.6
CHMP1A-206ENST00000549139 PATL2C9JE40 543 aaKnown RBP18.78■□□□□ 0.6
CHMP1A-206ENST00000549139 USP17L12C9JPN9 530 aa18.78■□□□□ 0.6
CHMP1A-206ENST00000549139 USP17L21D6R901 530 aa18.78■□□□□ 0.6
CHMP1A-206ENST00000549139 CNGA1P29973 690 aa18.78■□□□□ 0.6
CHMP1A-206ENST00000549139 SNX17Q15036 470 aa18.78■□□□□ 0.6
CHMP1A-206ENST00000549139 ZYXQ15942 572 aaKnown RBP18.78■□□□□ 0.6
CHMP1A-206ENST00000549139 C12orf60Q5U649 245 aa18.78■□□□□ 0.6
CHMP1A-206ENST00000549139 SLC39A5Q6ZMH5 540 aa18.78■□□□□ 0.6
CHMP1A-206ENST00000549139 CENPQQ7L2Z9 268 aaPredicted RBP18.78■□□□□ 0.6
CHMP1A-206ENST00000549139 AMOTL1Q8IY63 956 aa18.78■□□□□ 0.6
CHMP1A-206ENST00000549139 CWC22Q9HCG8 908 aaKnown RBP18.78■□□□□ 0.6
CHMP1A-206ENST00000549139 PRDM6Q9NQX0 595 aa18.78■□□□□ 0.6
CHMP1A-206ENST00000549139 HELLSQ9NRZ9 838 aa18.78■□□□□ 0.6
CHMP1A-206ENST00000549139 VCAM1P19320 739 aa18.77■□□□□ 0.6
CHMP1A-206ENST00000549139 SMAD3P84022 425 aaKnown RBP18.77■□□□□ 0.6
CHMP1A-206ENST00000549139 GJC2Q5T442 439 aaPredicted RBP18.77■□□□□ 0.6
CHMP1A-206ENST00000549139 WDR78Q5VTH9 848 aa18.77■□□□□ 0.6
CHMP1A-206ENST00000549139 CTR9Q6PD62 1173 aa18.77■□□□□ 0.6
CHMP1A-206ENST00000549139 ACER1Q8TDN7 264 aa18.77■□□□□ 0.6
CHMP1A-206ENST00000549139 KIAA1683Q9H0B3 1180 aa18.77■□□□□ 0.6
CHMP1A-206ENST00000549139 ATP11BQ9Y2G3 1177 aa18.77■□□□□ 0.6
CHMP1A-206ENST00000549139 SPDYE16A6NNV3 312 aaPredicted RBP18.76■□□□□ 0.59
CHMP1A-206ENST00000549139 USP14P54578 494 aa18.76■□□□□ 0.59
CHMP1A-206ENST00000549139 SBK1Q52WX2 424 aa18.76■□□□□ 0.59
CHMP1A-206ENST00000549139 MYLIPQ8WY64 445 aa18.76■□□□□ 0.59
CHMP1A-206ENST00000549139 BADQ92934 168 aa18.76■□□□□ 0.59
CHMP1A-206ENST00000549139 ARPP21Q9UBL0 812 aaPredicted RBP18.76■□□□□ 0.59
CHMP1A-206ENST00000549139 SWAP70Q9UH65 585 aa18.76■□□□□ 0.59
CHMP1A-206ENST00000549139 ZNF236Q9UL36 1845 aa18.76■□□□□ 0.59
CHMP1A-206ENST00000549139 MYO9BQ13459 2157 aa18.75■□□□□ 0.59
CHMP1A-206ENST00000549139 SMCHD1A6NHR9 2005 aa18.75■□□□□ 0.59
CHMP1A-206ENST00000549139 CYP2D6P10635 497 aa18.75■□□□□ 0.59
CHMP1A-206ENST00000549139 SDSP20132 328 aa18.75■□□□□ 0.59
CHMP1A-206ENST00000549139 SHMT1P34896 483 aa18.75■□□□□ 0.59
CHMP1A-206ENST00000549139 TRIM60Q495X7 471 aa18.75■□□□□ 0.59
CHMP1A-206ENST00000549139 CERKLQ49MI3 558 aaPredicted RBP18.75■□□□□ 0.59
CHMP1A-206ENST00000549139 MCMDC2Q4G0Z9 681 aa18.75■□□□□ 0.59
CHMP1A-206ENST00000549139 TTC22Q5TAA0 569 aa18.75■□□□□ 0.59
CHMP1A-206ENST00000549139 IFNL3Q8IZI9 196 aa18.75■□□□□ 0.59
CHMP1A-206ENST00000549139 ARRDC4Q8NCT1 418 aa18.75■□□□□ 0.59
CHMP1A-206ENST00000549139 FEZ1Q99689 392 aa18.75■□□□□ 0.59
CHMP1A-206ENST00000549139 PDLIM7Q9NR12 457 aa18.75■□□□□ 0.59
CHMP1A-206ENST00000549139 IVNS1ABPQ9Y6Y0 642 aa18.75■□□□□ 0.59
CHMP1A-206ENST00000549139 TRIM43BA6NCK2 446 aa18.74■□□□□ 0.59
CHMP1A-206ENST00000549139 APPP05067 770 aa18.74■□□□□ 0.59
CHMP1A-206ENST00000549139 EVX2Q03828 476 aa18.74■□□□□ 0.59
CHMP1A-206ENST00000549139 C1orf53Q5VUE5 145 aa18.74■□□□□ 0.59
CHMP1A-206ENST00000549139 OLFML2BQ68BL8 750 aa18.74■□□□□ 0.59
CHMP1A-206ENST00000549139 SH3RF1Q7Z6J0 888 aa18.74■□□□□ 0.59
CHMP1A-206ENST00000549139 TRIM43Q96BQ3 446 aaPredicted RBP18.74■□□□□ 0.59
CHMP1A-206ENST00000549139 HIP1O00291 1037 aa18.73■□□□□ 0.59
CHMP1A-206ENST00000549139 GUCY1A2P33402 732 aa18.73■□□□□ 0.59
CHMP1A-206ENST00000549139 RAB3GAP1Q15042 981 aa18.73■□□□□ 0.59
CHMP1A-206ENST00000549139 ERICH6BQ5W0A0 696 aa18.73■□□□□ 0.59
CHMP1A-206ENST00000549139 DYNLL2Q96FJ2 89 aa18.73■□□□□ 0.59
CHMP1A-206ENST00000549139 CCDC136Q96JN2 1154 aa18.73■□□□□ 0.59
CHMP1A-206ENST00000549139 FAM227BQ96M60 508 aa18.73■□□□□ 0.59
CHMP1A-206ENST00000549139 NACAP1Q9BZK3 213 aa18.73■□□□□ 0.59
CHMP1A-206ENST00000549139 EPB41L4AQ9HCS5 686 aaPredicted RBP18.73■□□□□ 0.59
CHMP1A-206ENST00000549139 CABP5Q9NP86 173 aa18.73■□□□□ 0.59
CHMP1A-206ENST00000549139 BDP1A6H8Y1 2624 aa18.73■□□□□ 0.59
CHMP1A-206ENST00000549139 CYP2D7A0A087X1C5 515 aa18.72■□□□□ 0.59
CHMP1A-206ENST00000549139 A0A0D9SFI3 127 aa18.72■□□□□ 0.59
CHMP1A-206ENST00000549139 KBTBD13C9JR72 458 aa18.72■□□□□ 0.59
CHMP1A-206ENST00000549139 SEPT4O43236 478 aa18.72■□□□□ 0.59
CHMP1A-206ENST00000549139 COBLO75128 1261 aa18.72■□□□□ 0.59
CHMP1A-206ENST00000549139 GSPT1P15170 499 aaKnown RBP18.72■□□□□ 0.59
CHMP1A-206ENST00000549139 ADORA2AP29274 412 aa18.72■□□□□ 0.59
CHMP1A-206ENST00000549139 CDK8P49336 464 aa18.72■□□□□ 0.59
CHMP1A-206ENST00000549139 NMIQ13287 307 aaPredicted RBP18.72■□□□□ 0.59
CHMP1A-206ENST00000549139 ABCB5Q2M3G0 1257 aa18.72■□□□□ 0.59
CHMP1A-206ENST00000549139 ANO1Q5XXA6 986 aa18.72■□□□□ 0.59
CHMP1A-206ENST00000549139 CCDC129Q6ZRS4 1044 aa18.72■□□□□ 0.59
CHMP1A-206ENST00000549139 C16orf86Q6ZW13 317 aa18.72■□□□□ 0.59
CHMP1A-206ENST00000549139 MOV10L1Q9BXT6 1211 aaKnown RBP18.72■□□□□ 0.59
CHMP1A-206ENST00000549139 RPAP3Q9H6T3 665 aaPredicted RBP18.72■□□□□ 0.59
CHMP1A-206ENST00000549139 PRDM5Q9NQX1 630 aaPredicted RBP18.72■□□□□ 0.59
CHMP1A-206ENST00000549139 SMIM22K7EJ46 135 aa18.71■□□□□ 0.59
CHMP1A-206ENST00000549139 STRNO43815 780 aa18.71■□□□□ 0.59
CHMP1A-206ENST00000549139 FOSL2P15408 326 aa18.71■□□□□ 0.59
CHMP1A-206ENST00000549139 ITGB8P26012 769 aa18.71■□□□□ 0.59
CHMP1A-206ENST00000549139 TDO2P48775 406 aa18.71■□□□□ 0.59
CHMP1A-206ENST00000549139 LRRC41Q15345 812 aa18.71■□□□□ 0.59
CHMP1A-206ENST00000549139 DPP9Q86TI2 863 aa18.71■□□□□ 0.59
CHMP1A-206ENST00000549139 CCDC17Q96LX7 622 aa18.71■□□□□ 0.59
CHMP1A-206ENST00000549139 A0A0G2JMZ2 1700 aa18.71■□□□□ 0.59
CHMP1A-206ENST00000549139 TMEM265A0A087WTH1 108 aa18.7■□□□□ 0.58
CHMP1A-206ENST00000549139 MINDY4BA8MYZ0 360 aa18.7■□□□□ 0.58
CHMP1A-206ENST00000549139 ADCYAP1R1P41586 468 aa18.7■□□□□ 0.58
CHMP1A-206ENST00000549139 SLC44A5Q8NCS7 719 aa18.7■□□□□ 0.58
CHMP1A-206ENST00000549139 SHCBP1Q8NEM2 672 aa18.7■□□□□ 0.58
CHMP1A-206ENST00000549139 NAPBQ9H115 298 aa18.7■□□□□ 0.58
CHMP1A-206ENST00000549139 ZNFX1Q9P2E3 1918 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms