RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 TNNI3KQ59H18 835 aa10.32□□□□□ -0.76
TROAP-208ENST00000548817 PPP2R2DQ66LE6 453 aa10.32□□□□□ -0.76
TROAP-208ENST00000548817 ZNF365Q70YC5 407 aa10.32□□□□□ -0.76
TROAP-208ENST00000548817 CERS3Q8IU89 383 aa10.32□□□□□ -0.76
TROAP-208ENST00000548817 FTSJ3Q8IY81 847 aaKnown RBP10.32□□□□□ -0.76
TROAP-208ENST00000548817 MICALL1Q8N3F8 863 aa10.32□□□□□ -0.76
TROAP-208ENST00000548817 STARD7Q9NQZ5 370 aa10.32□□□□□ -0.76
TROAP-208ENST00000548817 BTBD7Q9P203 1132 aa10.32□□□□□ -0.76
TROAP-208ENST00000548817 FPGT-TNNI3KV9GXZ4 949 aa10.32□□□□□ -0.76
TROAP-208ENST00000548817 ZDBF2Q9HCK1 2354 aa10.32□□□□□ -0.76
TROAP-208ENST00000548817 ELP1O95163 1332 aa10.32□□□□□ -0.76
TROAP-208ENST00000548817 SPDYE16A6NNV3 312 aaPredicted RBP10.31□□□□□ -0.76
TROAP-208ENST00000548817 CSF2RAP15509 400 aa10.31□□□□□ -0.76
TROAP-208ENST00000548817 CYP7A1P22680 504 aa10.31□□□□□ -0.76
TROAP-208ENST00000548817 USP5P45974 858 aa10.31□□□□□ -0.76
TROAP-208ENST00000548817 JAG1P78504 1218 aa10.31□□□□□ -0.76
TROAP-208ENST00000548817 ATP8B2P98198 1209 aa10.31□□□□□ -0.76
TROAP-208ENST00000548817 KHSRPQ92945 711 aaKnown RBP eCLIP10.31□□□□□ -0.762e-6■■□□□ 11.4
TROAP-208ENST00000548817 HLA-CQ95604 372 aa10.31□□□□□ -0.76
TROAP-208ENST00000548817 FEZ1Q99689 392 aa10.31□□□□□ -0.76
TROAP-208ENST00000548817 DBNDD2Q9BQY9 259 aa10.31□□□□□ -0.76
TROAP-208ENST00000548817 KIAA1683Q9H0B3 1180 aa10.31□□□□□ -0.76
TROAP-208ENST00000548817 MROH8Q9H579 483 aa10.31□□□□□ -0.76
TROAP-208ENST00000548817 IL23AQ9NPF7 189 aa10.31□□□□□ -0.76
TROAP-208ENST00000548817 SAP30BPQ9UHR5 308 aaKnown RBP10.31□□□□□ -0.76
TROAP-208ENST00000548817 PALD1Q9ULE6 856 aa10.31□□□□□ -0.76
TROAP-208ENST00000548817 YBX2Q9Y2T7 364 aaKnown RBP10.31□□□□□ -0.76
TROAP-208ENST00000548817 PCDHA11Q9Y5I1 949 aa10.31□□□□□ -0.76
TROAP-208ENST00000548817 MTCH2Q9Y6C9 303 aa10.31□□□□□ -0.76
TROAP-208ENST00000548817 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.31□□□□□ -0.76
TROAP-208ENST00000548817 SMCHD1A6NHR9 2005 aa10.31□□□□□ -0.76
TROAP-208ENST00000548817 FLT1P17948 1338 aa10.31□□□□□ -0.76
TROAP-208ENST00000548817 A0A0G2JMZ2 1700 aa10.3□□□□□ -0.76
TROAP-208ENST00000548817 COBLO75128 1261 aa10.3□□□□□ -0.76
TROAP-208ENST00000548817 ADAMTS4O75173 837 aa10.3□□□□□ -0.76
TROAP-208ENST00000548817 IDH1O75874 414 aaKnown RBP10.3□□□□□ -0.76
TROAP-208ENST00000548817 GDF11O95390 407 aa10.3□□□□□ -0.76
TROAP-208ENST00000548817 CYP2E1P05181 493 aaPredicted RBP10.3□□□□□ -0.76
TROAP-208ENST00000548817 ALADP13716 330 aa10.3□□□□□ -0.76
TROAP-208ENST00000548817 VCAM1P19320 739 aa10.3□□□□□ -0.76
TROAP-208ENST00000548817 ACLYP53396 1101 aa10.3□□□□□ -0.76
TROAP-208ENST00000548817 TMEM57Q8N5G2 664 aa10.3□□□□□ -0.76
TROAP-208ENST00000548817 SSH3Q8TE77 659 aa10.3□□□□□ -0.76
TROAP-208ENST00000548817 MAML3Q96JK9 1138 aa10.3□□□□□ -0.76
TROAP-208ENST00000548817 ZNF512BQ96KM6 892 aaPredicted RBP10.3□□□□□ -0.76
TROAP-208ENST00000548817 MOV10L1Q9BXT6 1211 aaKnown RBP10.3□□□□□ -0.76
TROAP-208ENST00000548817 DNAJC18Q9H819 358 aa10.3□□□□□ -0.76
TROAP-208ENST00000548817 PGK1P00558 417 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 FGBP02675 491 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 AKR1A1P14550 325 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 ZAP70P43403 619 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 CDK7P50613 346 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 POLA2Q14181 598 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 CSPP1Q1MSJ5 1256 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 PRAMEF19Q5SWL8 479 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 TTC6Q86TZ1 520 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 ITPRIPQ8IWB1 547 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 MB21D1Q8N884 522 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 GLT1D1Q96MS3 346 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 SPATC1LQ9H0A9 340 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 CCDC8Q9H0W5 538 aaPredicted RBP10.29□□□□□ -0.76
TROAP-208ENST00000548817 CABP5Q9NP86 173 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 HOXC10Q9NYD6 342 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 TNNQ9UQP3 1299 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 ZNF318Q5VUA4 2279 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 WDFY4Q6ZS81 3184 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 BRWD1Q9NSI6 2320 aa10.29□□□□□ -0.76
TROAP-208ENST00000548817 FOCADQ5VW36 1801 aa10.28□□□□□ -0.76
TROAP-208ENST00000548817 APBB1O00213 710 aa10.28□□□□□ -0.76
TROAP-208ENST00000548817 TLR3O15455 904 aaKnown RBP10.28□□□□□ -0.76
TROAP-208ENST00000548817 ST18O60284 1047 aa10.28□□□□□ -0.76
TROAP-208ENST00000548817 GH2P01242 217 aa10.28□□□□□ -0.76
TROAP-208ENST00000548817 ACRP10323 421 aa10.28□□□□□ -0.76
TROAP-208ENST00000548817 ERCC3P19447 782 aa10.28□□□□□ -0.76
TROAP-208ENST00000548817 DYNLL1P63167 89 aaKnown RBP10.28□□□□□ -0.76
TROAP-208ENST00000548817 TMED8Q6PL24 325 aaPredicted RBP10.28□□□□□ -0.76
TROAP-208ENST00000548817 ERC1Q8IUD2 1116 aa10.28□□□□□ -0.76
TROAP-208ENST00000548817 KLHDC9Q8NEP7 349 aa10.28□□□□□ -0.76
TROAP-208ENST00000548817 FBXL18Q96ME1 805 aa10.28□□□□□ -0.76
TROAP-208ENST00000548817 C1orf115Q9H7X2 142 aa10.28□□□□□ -0.76
TROAP-208ENST00000548817 PIH1D3Q9NQM4 214 aaKnown RBP10.28□□□□□ -0.76
TROAP-208ENST00000548817 DIS3Q9Y2L1 958 aaKnown RBP10.28□□□□□ -0.76
TROAP-208ENST00000548817 MYH1P12882 1939 aa10.27□□□□□ -0.76
TROAP-208ENST00000548817 POLR3DP05423 398 aaPredicted RBP10.27□□□□□ -0.77
TROAP-208ENST00000548817 FCER1AP12319 257 aa10.27□□□□□ -0.77
TROAP-208ENST00000548817 CST5P28325 142 aaPredicted RBP10.27□□□□□ -0.77
TROAP-208ENST00000548817 COG2Q14746 738 aa10.27□□□□□ -0.77
TROAP-208ENST00000548817 RAB3GAP1Q15042 981 aa10.27□□□□□ -0.77
TROAP-208ENST00000548817 ZYXQ15942 572 aaKnown RBP10.27□□□□□ -0.77
TROAP-208ENST00000548817 ABCB5Q2M3G0 1257 aa10.27□□□□□ -0.77
TROAP-208ENST00000548817 CERKLQ49MI3 558 aaPredicted RBP10.27□□□□□ -0.77
TROAP-208ENST00000548817 ADGRA1Q86SQ6 560 aa10.27□□□□□ -0.77
TROAP-208ENST00000548817 MAGEB6Q8N7X4 407 aa10.27□□□□□ -0.77
TROAP-208ENST00000548817 MIGA1Q8NAN2 632 aa10.27□□□□□ -0.77
TROAP-208ENST00000548817 PCSK9Q8NBP7 692 aaKnown RBP10.27□□□□□ -0.77
TROAP-208ENST00000548817 TINF2Q9BSI4 451 aa10.27□□□□□ -0.77
TROAP-208ENST00000548817 SERPINB13Q9UIV8 391 aa10.27□□□□□ -0.77
TROAP-208ENST00000548817 NOP58Q9Y2X3 529 aaKnown RBP10.27□□□□□ -0.77
TROAP-208ENST00000548817 SLC4A7Q9Y6M7 1214 aa10.27□□□□□ -0.77
TROAP-208ENST00000548817 SYNRGQ9UMZ2 1314 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms