RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 STAP2Q9UGK3 403 aa19.22■□□□□ 0.67
RAPGEF3-217ENST00000548434 ZNF214Q9UL59 606 aaPredicted RBP19.22■□□□□ 0.67
RAPGEF3-217ENST00000548434 FLOT1O75955 427 aa19.21■□□□□ 0.67
RAPGEF3-217ENST00000548434 CYP2C19P33261 490 aa19.21■□□□□ 0.67
RAPGEF3-217ENST00000548434 IFNL3Q8IZI9 196 aa19.21■□□□□ 0.67
RAPGEF3-217ENST00000548434 GPATCH3Q96I76 525 aa19.21■□□□□ 0.67
RAPGEF3-217ENST00000548434 CRBNQ96SW2 442 aa19.21■□□□□ 0.67
RAPGEF3-217ENST00000548434 MROH8Q9H579 483 aa19.21■□□□□ 0.67
RAPGEF3-217ENST00000548434 SH2D4AQ9H788 454 aa19.21■□□□□ 0.67
RAPGEF3-217ENST00000548434 TACC3Q9Y6A5 838 aa19.21■□□□□ 0.67
RAPGEF3-217ENST00000548434 VWA5AO00534 786 aa19.2■□□□□ 0.66
RAPGEF3-217ENST00000548434 HDAC1Q13547 482 aaPredicted RBP19.2■□□□□ 0.66
RAPGEF3-217ENST00000548434 MFSD14CQ5VZR4 134 aa19.2■□□□□ 0.66
RAPGEF3-217ENST00000548434 DDRGK1Q96HY6 314 aa19.2■□□□□ 0.66
RAPGEF3-217ENST00000548434 PPP1R9AQ9ULJ8 1098 aa19.2■□□□□ 0.66
RAPGEF3-217ENST00000548434 GNAT2P19087 354 aa19.19■□□□□ 0.66
RAPGEF3-217ENST00000548434 BMP8BP34820 402 aa19.19■□□□□ 0.66
RAPGEF3-217ENST00000548434 ATP2B2Q01814 1243 aa19.19■□□□□ 0.66
RAPGEF3-217ENST00000548434 LRRC26Q2I0M4 334 aa19.19■□□□□ 0.66
RAPGEF3-217ENST00000548434 RIOX2Q8IUF8 465 aa19.19■□□□□ 0.66
RAPGEF3-217ENST00000548434 AMOTL1Q8IY63 956 aa19.19■□□□□ 0.66
RAPGEF3-217ENST00000548434 DDX20Q9UHI6 824 aaKnown RBP19.19■□□□□ 0.66
RAPGEF3-217ENST00000548434 IVNS1ABPQ9Y6Y0 642 aa19.19■□□□□ 0.66
RAPGEF3-217ENST00000548434 PLIN4Q96Q06 1357 aa19.19■□□□□ 0.66
RAPGEF3-217ENST00000548434 A0A1W2PPC1 479 aa19.18■□□□□ 0.66
RAPGEF3-217ENST00000548434 MINDY4BA8MYZ0 360 aa19.18■□□□□ 0.66
RAPGEF3-217ENST00000548434 F5H6K3 240 aa19.18■□□□□ 0.66
RAPGEF3-217ENST00000548434 MX1P20591 662 aa19.18■□□□□ 0.66
RAPGEF3-217ENST00000548434 KLRC3Q07444 240 aa19.18■□□□□ 0.66
RAPGEF3-217ENST00000548434 FAM83BQ5T0W9 1011 aa19.18■□□□□ 0.66
RAPGEF3-217ENST00000548434 WDR78Q5VTH9 848 aa19.18■□□□□ 0.66
RAPGEF3-217ENST00000548434 MAML3Q96JK9 1138 aa19.18■□□□□ 0.66
RAPGEF3-217ENST00000548434 MTMR4Q9NYA4 1195 aa19.18■□□□□ 0.66
RAPGEF3-217ENST00000548434 ERC2O15083 957 aa19.17■□□□□ 0.66
RAPGEF3-217ENST00000548434 NDUFB10O96000 172 aa19.17■□□□□ 0.66
RAPGEF3-217ENST00000548434 NUP88Q99567 741 aaPredicted RBP19.17■□□□□ 0.66
RAPGEF3-217ENST00000548434 GOPCQ9HD26 462 aa19.17■□□□□ 0.66
RAPGEF3-217ENST00000548434 SOX1O00570 391 aaPredicted RBP19.16■□□□□ 0.66
RAPGEF3-217ENST00000548434 SLC25A27O95847 323 aa19.16■□□□□ 0.66
RAPGEF3-217ENST00000548434 NOVP48745 357 aa19.16■□□□□ 0.66
RAPGEF3-217ENST00000548434 ZNF792Q3KQV3 632 aa19.16■□□□□ 0.66
RAPGEF3-217ENST00000548434 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.16■□□□□ 0.66
RAPGEF3-217ENST00000548434 DPP9Q86TI2 863 aa19.16■□□□□ 0.66
RAPGEF3-217ENST00000548434 C7orf61Q8IZ16 206 aa19.16■□□□□ 0.66
RAPGEF3-217ENST00000548434 STK11IPQ8N1F8 1099 aa19.16■□□□□ 0.66
RAPGEF3-217ENST00000548434 NEDD1Q8NHV4 660 aa19.16■□□□□ 0.66
RAPGEF3-217ENST00000548434 CEP95Q96GE4 821 aa19.16■□□□□ 0.66
RAPGEF3-217ENST00000548434 MKNK2Q9HBH9 465 aa19.16■□□□□ 0.66
RAPGEF3-217ENST00000548434 SYNPO2Q9UMS6 1093 aa19.16■□□□□ 0.66
RAPGEF3-217ENST00000548434 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.16■□□□□ 0.66
RAPGEF3-217ENST00000548434 ATP2A1O14983 1001 aa19.15■□□□□ 0.66
RAPGEF3-217ENST00000548434 MSCO60682 206 aa19.15■□□□□ 0.66
RAPGEF3-217ENST00000548434 PRDM1O75626 825 aa19.15■□□□□ 0.66
RAPGEF3-217ENST00000548434 STAT3P40763 770 aa19.15■□□□□ 0.66
RAPGEF3-217ENST00000548434 PDE1AP54750 535 aa19.15■□□□□ 0.66
RAPGEF3-217ENST00000548434 PRAMEF19Q5SWL8 479 aa19.15■□□□□ 0.66
RAPGEF3-217ENST00000548434 NCAPG2Q86XI2 1143 aa19.15■□□□□ 0.66
RAPGEF3-217ENST00000548434 CWC22Q9HCG8 908 aaKnown RBP19.15■□□□□ 0.66
RAPGEF3-217ENST00000548434 CLIP2Q9UDT6 1046 aa19.15■□□□□ 0.66
RAPGEF3-217ENST00000548434 ZMYND8Q9ULU4 1186 aaPredicted RBP19.15■□□□□ 0.66
RAPGEF3-217ENST00000548434 RIPK3Q9Y572 518 aa19.15■□□□□ 0.66
RAPGEF3-217ENST00000548434 MCM3APO60318 1980 aa19.15■□□□□ 0.66
RAPGEF3-217ENST00000548434 DNAJC25-GNG10A0A024R161 153 aa19.14■□□□□ 0.65
RAPGEF3-217ENST00000548434 SEPT4O43236 478 aa19.14■□□□□ 0.65
RAPGEF3-217ENST00000548434 FGRP09769 529 aa19.14■□□□□ 0.65
RAPGEF3-217ENST00000548434 FCER1AP12319 257 aa19.14■□□□□ 0.65
RAPGEF3-217ENST00000548434 PLS1Q14651 629 aa19.14■□□□□ 0.65
RAPGEF3-217ENST00000548434 ANKRD45Q5TZF3 282 aa19.14■□□□□ 0.65
RAPGEF3-217ENST00000548434 CCDC129Q6ZRS4 1044 aa19.14■□□□□ 0.65
RAPGEF3-217ENST00000548434 GMCL1P1Q8NEA9 526 aa19.14■□□□□ 0.65
RAPGEF3-217ENST00000548434 INCENPQ9NQS7 918 aa19.14■□□□□ 0.65
RAPGEF3-217ENST00000548434 DIS3Q9Y2L1 958 aaKnown RBP19.14■□□□□ 0.65
RAPGEF3-217ENST00000548434 TDO2P48775 406 aa19.13■□□□□ 0.65
RAPGEF3-217ENST00000548434 PPARAQ07869 468 aa19.13■□□□□ 0.65
RAPGEF3-217ENST00000548434 VPS53Q5VIR6 699 aa19.13■□□□□ 0.65
RAPGEF3-217ENST00000548434 SMC5Q8IY18 1101 aa19.13■□□□□ 0.65
RAPGEF3-217ENST00000548434 SLF1Q9BQI6 1058 aa19.13■□□□□ 0.65
RAPGEF3-217ENST00000548434 FSD1Q9BTV5 496 aa19.13■□□□□ 0.65
RAPGEF3-217ENST00000548434 IL17RBQ9NRM6 502 aa19.13■□□□□ 0.65
RAPGEF3-217ENST00000548434 ANAPC4Q9UJX5 808 aa19.13■□□□□ 0.65
RAPGEF3-217ENST00000548434 LTBP2Q14767 1821 aa19.12■□□□□ 0.65
RAPGEF3-217ENST00000548434 DNM1LO00429 736 aa19.12■□□□□ 0.65
RAPGEF3-217ENST00000548434 PGK2P07205 417 aa19.12■□□□□ 0.65
RAPGEF3-217ENST00000548434 SYN1P17600 705 aa19.12■□□□□ 0.65
RAPGEF3-217ENST00000548434 MAGEA10P43363 369 aaPredicted RBP19.12■□□□□ 0.65
RAPGEF3-217ENST00000548434 ALX1Q15699 326 aa19.12■□□□□ 0.65
RAPGEF3-217ENST00000548434 LRRFIP1Q32MZ4 808 aaKnown RBP19.12■□□□□ 0.65
RAPGEF3-217ENST00000548434 ZNF444Q8N0Y2 327 aaPredicted RBP19.12■□□□□ 0.65
RAPGEF3-217ENST00000548434 PRPF38AQ8NAV1 312 aaKnown RBP19.12■□□□□ 0.65
RAPGEF3-217ENST00000548434 FGD4Q96M96 766 aa19.12■□□□□ 0.65
RAPGEF3-217ENST00000548434 SLC38A10Q9HBR0 1119 aa19.12■□□□□ 0.65
RAPGEF3-217ENST00000548434 NRBP1Q9UHY1 535 aa19.12■□□□□ 0.65
RAPGEF3-217ENST00000548434 A0A0C4DFX4 3053 aa19.11■□□□□ 0.65
RAPGEF3-217ENST00000548434 TTLL1O95922 423 aa19.11■□□□□ 0.65
RAPGEF3-217ENST00000548434 APPP05067 770 aa19.11■□□□□ 0.65
RAPGEF3-217ENST00000548434 ZNF865P0CJ78 1059 aaPredicted RBP19.11■□□□□ 0.65
RAPGEF3-217ENST00000548434 TAL1P17542 331 aaPredicted RBP19.11■□□□□ 0.65
RAPGEF3-217ENST00000548434 FAM47AQ5JRC9 791 aa19.11■□□□□ 0.65
RAPGEF3-217ENST00000548434 TICAM2Q86XR7 235 aa19.11■□□□□ 0.65
RAPGEF3-217ENST00000548434 MMP19Q99542 508 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms