RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 STRNO43815 780 aa24.43■■□□□ 1.5
SSH1-207ENST00000547862 TMEM132BQ14DG7 1078 aa24.43■■□□□ 1.5
SSH1-207ENST00000547862 PRAMEF19Q5SWL8 479 aa24.43■■□□□ 1.5
SSH1-207ENST00000547862 FAM83BQ5T0W9 1011 aa24.43■■□□□ 1.5
SSH1-207ENST00000547862 GPATCH3Q96I76 525 aa24.43■■□□□ 1.5
SSH1-207ENST00000547862 MROH8Q9H579 483 aa24.43■■□□□ 1.5
SSH1-207ENST00000547862 GOPCQ9HD26 462 aa24.43■■□□□ 1.5
SSH1-207ENST00000547862 Q7L0L9 218 aa24.42■■□□□ 1.5
SSH1-207ENST00000547862 KANSL2Q9H9L4 492 aa24.42■■□□□ 1.5
SSH1-207ENST00000547862 SLC5A4Q9NY91 659 aa24.42■■□□□ 1.5
SSH1-207ENST00000547862 ATP11BQ9Y2G3 1177 aa24.42■■□□□ 1.5
SSH1-207ENST00000547862 MINDY4BA8MYZ0 360 aa24.41■■□□□ 1.5
SSH1-207ENST00000547862 KBTBD13C9JR72 458 aa24.41■■□□□ 1.5
SSH1-207ENST00000547862 FCER1AP12319 257 aa24.41■■□□□ 1.5
SSH1-207ENST00000547862 RTP1P59025 263 aa24.41■■□□□ 1.5
SSH1-207ENST00000547862 MMP19Q99542 508 aa24.41■■□□□ 1.5
SSH1-207ENST00000547862 NUP88Q99567 741 aaPredicted RBP24.41■■□□□ 1.5
SSH1-207ENST00000547862 PGK2P07205 417 aa24.4■■□□□ 1.5
SSH1-207ENST00000547862 KBTBD3Q8NAB2 608 aa24.4■■□□□ 1.5
SSH1-207ENST00000547862 MAML3Q96JK9 1138 aa24.4■■□□□ 1.5
SSH1-207ENST00000547862 SMCHD1A6NHR9 2005 aa24.4■■□□□ 1.5
SSH1-207ENST00000547862 SEPT4O43236 478 aa24.39■■□□□ 1.49
SSH1-207ENST00000547862 DEFB123Q8N688 67 aa24.39■■□□□ 1.49
SSH1-207ENST00000547862 OSBP2Q969R2 916 aa24.39■■□□□ 1.49
SSH1-207ENST00000547862 STRBPQ96SI9 672 aaKnown RBP24.39■■□□□ 1.49
SSH1-207ENST00000547862 LBHD1Q9BQE6 289 aaPredicted RBP24.39■■□□□ 1.49
SSH1-207ENST00000547862 MKNK2Q9HBH9 465 aa24.39■■□□□ 1.49
SSH1-207ENST00000547862 SLC25A27O95847 323 aa24.38■■□□□ 1.49
SSH1-207ENST00000547862 IGHA2P01877 340 aa24.38■■□□□ 1.49
SSH1-207ENST00000547862 RASA1P20936 1047 aa24.38■■□□□ 1.49
SSH1-207ENST00000547862 SLC4A3P48751 1232 aa24.38■■□□□ 1.49
SSH1-207ENST00000547862 TDO2P48775 406 aa24.38■■□□□ 1.49
SSH1-207ENST00000547862 FAM47AQ5JRC9 791 aa24.38■■□□□ 1.49
SSH1-207ENST00000547862 ARRDC4Q8NCT1 418 aa24.38■■□□□ 1.49
SSH1-207ENST00000547862 APPBP2Q92624 585 aa24.38■■□□□ 1.49
SSH1-207ENST00000547862 PRDM5Q9NQX1 630 aaPredicted RBP24.38■■□□□ 1.49
SSH1-207ENST00000547862 PRKAG2Q9UGJ0 569 aa24.38■■□□□ 1.49
SSH1-207ENST00000547862 PPP1R9AQ9ULJ8 1098 aa24.38■■□□□ 1.49
SSH1-207ENST00000547862 GSG1L2A8MUP6 293 aa24.37■■□□□ 1.49
SSH1-207ENST00000547862 M0R2C6 588 aa24.37■■□□□ 1.49
SSH1-207ENST00000547862 GPAA1O43292 621 aa24.37■■□□□ 1.49
SSH1-207ENST00000547862 LRIT3Q3SXY7 679 aa24.37■■□□□ 1.49
SSH1-207ENST00000547862 ABRAQ8N0Z2 381 aa24.37■■□□□ 1.49
SSH1-207ENST00000547862 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.37■■□□□ 1.49
SSH1-207ENST00000547862 EPB41L4AQ9HCS5 686 aaPredicted RBP24.37■■□□□ 1.49
SSH1-207ENST00000547862 ROBO3Q96MS0 1386 aa24.37■■□□□ 1.49
SSH1-207ENST00000547862 VWA5AO00534 786 aa24.36■■□□□ 1.49
SSH1-207ENST00000547862 APPP05067 770 aa24.36■■□□□ 1.49
SSH1-207ENST00000547862 KCTD2Q14681 263 aa24.36■■□□□ 1.49
SSH1-207ENST00000547862 RIOX2Q8IUF8 465 aa24.36■■□□□ 1.49
SSH1-207ENST00000547862 FERMT2Q96AC1 680 aa24.36■■□□□ 1.49
SSH1-207ENST00000547862 COL6A3P12111 3177 aa24.35■■□□□ 1.49
SSH1-207ENST00000547862 RNF113AO15541 343 aaKnown RBP24.35■■□□□ 1.49
SSH1-207ENST00000547862 PRDM1O75626 825 aa24.35■■□□□ 1.49
SSH1-207ENST00000547862 STAT3P40763 770 aa24.35■■□□□ 1.49
SSH1-207ENST00000547862 SBK1Q52WX2 424 aa24.35■■□□□ 1.49
SSH1-207ENST00000547862 SLC17A8Q8NDX2 589 aa24.35■■□□□ 1.49
SSH1-207ENST00000547862 ZNF214Q9UL59 606 aaPredicted RBP24.35■■□□□ 1.49
SSH1-207ENST00000547862 MCM3APO60318 1980 aa24.34■■□□□ 1.49
SSH1-207ENST00000547862 ADCYAP1R1P41586 468 aa24.34■■□□□ 1.49
SSH1-207ENST00000547862 TRIM60Q495X7 471 aa24.34■■□□□ 1.49
SSH1-207ENST00000547862 LENG1Q96BZ8 264 aaPredicted RBP24.34■■□□□ 1.49
SSH1-207ENST00000547862 SLF1Q9BQI6 1058 aa24.34■■□□□ 1.49
SSH1-207ENST00000547862 DCTPP1Q9H773 170 aa24.34■■□□□ 1.49
SSH1-207ENST00000547862 ISY1Q9ULR0 285 aaKnown RBP24.34■■□□□ 1.49
SSH1-207ENST00000547862 NDUFB10O96000 172 aa24.33■■□□□ 1.49
SSH1-207ENST00000547862 LRRC41Q15345 812 aa24.33■■□□□ 1.49
SSH1-207ENST00000547862 SNRNP48Q6IEG0 339 aaKnown RBP24.33■■□□□ 1.49
SSH1-207ENST00000547862 SLC39A5Q6ZMH5 540 aa24.33■■□□□ 1.49
SSH1-207ENST00000547862 LRRC47Q8N1G4 583 aaKnown RBP24.33■■□□□ 1.49
SSH1-207ENST00000547862 REPS2Q8NFH8 660 aa24.33■■□□□ 1.49
SSH1-207ENST00000547862 ADAMTS5Q9UNA0 930 aa24.33■■□□□ 1.49
SSH1-207ENST00000547862 TAL1P17542 331 aaPredicted RBP24.32■■□□□ 1.48
SSH1-207ENST00000547862 XPNPEP3Q9NQH7 507 aa24.32■■□□□ 1.48
SSH1-207ENST00000547862 CLIP2Q9UDT6 1046 aa24.32■■□□□ 1.48
SSH1-207ENST00000547862 CTDP1Q9Y5B0 961 aaPredicted RBP24.32■■□□□ 1.48
SSH1-207ENST00000547862 F5H6K3 240 aa24.31■■□□□ 1.48
SSH1-207ENST00000547862 ZFYP08048 801 aaPredicted RBP24.31■■□□□ 1.48
SSH1-207ENST00000547862 RARBP10826 455 aa24.31■■□□□ 1.48
SSH1-207ENST00000547862 KLRC3Q07444 240 aa24.31■■□□□ 1.48
SSH1-207ENST00000547862 GIMAP6Q6P9H5 292 aa24.31■■□□□ 1.48
SSH1-207ENST00000547862 CPXCR1Q8N123 301 aa24.31■■□□□ 1.48
SSH1-207ENST00000547862 KIFC2Q96AC6 838 aa24.31■■□□□ 1.48
SSH1-207ENST00000547862 SEC62Q99442 399 aaKnown RBP24.31■■□□□ 1.48
SSH1-207ENST00000547862 TINF2Q9BSI4 451 aa24.31■■□□□ 1.48
SSH1-207ENST00000547862 FSD1Q9BTV5 496 aa24.31■■□□□ 1.48
SSH1-207ENST00000547862 NYAP2Q9P242 653 aa24.31■■□□□ 1.48
SSH1-207ENST00000547862 PGK1P00558 417 aa24.3■■□□□ 1.48
SSH1-207ENST00000547862 COPB2P35606 906 aa24.3■■□□□ 1.48
SSH1-207ENST00000547862 ZNF792Q3KQV3 632 aa24.3■■□□□ 1.48
SSH1-207ENST00000547862 GPR153Q6NV75 609 aa24.3■■□□□ 1.48
SSH1-207ENST00000547862 ZNF444Q8N0Y2 327 aaPredicted RBP24.3■■□□□ 1.48
SSH1-207ENST00000547862 OTUD7AQ8TE49 926 aaPredicted RBP24.3■■□□□ 1.48
SSH1-207ENST00000547862 CHMP4CQ96CF2 233 aa24.3■■□□□ 1.48
SSH1-207ENST00000547862 CEP95Q96GE4 821 aa24.3■■□□□ 1.48
SSH1-207ENST00000547862 TEX13BQ9BXU2 312 aa24.3■■□□□ 1.48
SSH1-207ENST00000547862 GNAT2P19087 354 aa24.29■■□□□ 1.48
SSH1-207ENST00000547862 DDX11Q96FC9 970 aa24.28■■□□□ 1.48
SSH1-207ENST00000547862 FAM161BQ96MY7 647 aa24.28■■□□□ 1.48
SSH1-207ENST00000547862 RAVER2Q9HCJ3 691 aaKnown RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms