RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 TATDN1Q6P1N9 297 aa14.26□□□□□ -0.13
HDAC7-226ENST00000547259 GPR142Q7Z601 462 aa14.26□□□□□ -0.13
HDAC7-226ENST00000547259 STK11IPQ8N1F8 1099 aa14.26□□□□□ -0.13
HDAC7-226ENST00000547259 SLC17A8Q8NDX2 589 aa14.26□□□□□ -0.13
HDAC7-226ENST00000547259 DIS3LQ8TF46 1054 aaKnown RBP14.26□□□□□ -0.13
HDAC7-226ENST00000547259 APBA2Q99767 749 aa14.26□□□□□ -0.13
HDAC7-226ENST00000547259 PAGR1Q9BTK6 254 aa14.26□□□□□ -0.13
HDAC7-226ENST00000547259 KIAA1683Q9H0B3 1180 aa14.26□□□□□ -0.13
HDAC7-226ENST00000547259 DNAJC18Q9H819 358 aa14.26□□□□□ -0.13
HDAC7-226ENST00000547259 GH2P01242 217 aa14.25□□□□□ -0.13
HDAC7-226ENST00000547259 CYP21A2P08686 494 aa14.25□□□□□ -0.13
HDAC7-226ENST00000547259 HSPA4P34932 840 aa14.25□□□□□ -0.13
HDAC7-226ENST00000547259 PLCD1P51178 756 aa14.25□□□□□ -0.13
HDAC7-226ENST00000547259 MAP2K5Q13163 448 aa14.25□□□□□ -0.13
HDAC7-226ENST00000547259 LRIT3Q3SXY7 679 aa14.25□□□□□ -0.13
HDAC7-226ENST00000547259 CERKLQ49MI3 558 aaPredicted RBP14.25□□□□□ -0.13
HDAC7-226ENST00000547259 USP6NLQ92738 828 aa14.25□□□□□ -0.13
HDAC7-226ENST00000547259 TXNRD2Q9NNW7 524 aa14.25□□□□□ -0.13
HDAC7-226ENST00000547259 EMILIN3Q9NT22 766 aa14.25□□□□□ -0.13
HDAC7-226ENST00000547259 ANAPC4Q9UJX5 808 aa14.25□□□□□ -0.13
HDAC7-226ENST00000547259 IVNS1ABPQ9Y6Y0 642 aa14.25□□□□□ -0.13
HDAC7-226ENST00000547259 COL6A3P12111 3177 aa14.24□□□□□ -0.13
HDAC7-226ENST00000547259 SLC15A5A6NIM6 579 aa14.24□□□□□ -0.13
HDAC7-226ENST00000547259 CACNB2Q08289 660 aaPredicted RBP14.24□□□□□ -0.13
HDAC7-226ENST00000547259 TRIM32Q13049 653 aa14.24□□□□□ -0.13
HDAC7-226ENST00000547259 ABCB5Q2M3G0 1257 aa14.24□□□□□ -0.13
HDAC7-226ENST00000547259 Q3C1V9 767 aa14.24□□□□□ -0.13
HDAC7-226ENST00000547259 MORN1Q5T089 497 aa14.24□□□□□ -0.13
HDAC7-226ENST00000547259 LBX2Q6XYB7 198 aa14.24□□□□□ -0.13
HDAC7-226ENST00000547259 TBC1D10CQ8IV04 446 aa14.24□□□□□ -0.13
HDAC7-226ENST00000547259 TDHQ8IZJ6 230 aa14.24□□□□□ -0.13
HDAC7-226ENST00000547259 DYNLL2Q96FJ2 89 aa14.24□□□□□ -0.13
HDAC7-226ENST00000547259 C22orf23Q9BZE7 217 aa14.24□□□□□ -0.13
HDAC7-226ENST00000547259 SMIM22K7EJ46 135 aa14.23□□□□□ -0.13
HDAC7-226ENST00000547259 MNX1P50219 401 aaPredicted RBP14.23□□□□□ -0.13
HDAC7-226ENST00000547259 PDE4BQ07343 736 aa14.23□□□□□ -0.13
HDAC7-226ENST00000547259 RAB3GAP1Q15042 981 aa14.23□□□□□ -0.13
HDAC7-226ENST00000547259 AKNAD1Q5T1N1 836 aa14.23□□□□□ -0.13
HDAC7-226ENST00000547259 CATSPERGQ6ZRH7 1159 aa14.23□□□□□ -0.13
HDAC7-226ENST00000547259 MFSD6Q6ZSS7 791 aa14.23□□□□□ -0.13
HDAC7-226ENST00000547259 C16orf86Q6ZW13 317 aa14.23□□□□□ -0.13
HDAC7-226ENST00000547259 UBE2OQ9C0C9 1292 aaKnown RBP14.23□□□□□ -0.13
HDAC7-226ENST00000547259 PORCNQ9H237 461 aa14.23□□□□□ -0.13
HDAC7-226ENST00000547259 RNF41Q9H4P4 317 aaPredicted RBP14.23□□□□□ -0.13
HDAC7-226ENST00000547259 ZNF287Q9HBT7 754 aa14.23□□□□□ -0.13
HDAC7-226ENST00000547259 TOMM22Q9NS69 142 aa14.23□□□□□ -0.13
HDAC7-226ENST00000547259 HOXC10Q9NYD6 342 aa14.23□□□□□ -0.13
HDAC7-226ENST00000547259 SWAP70Q9UH65 585 aa14.23□□□□□ -0.13
HDAC7-226ENST00000547259 ZMYND8Q9ULU4 1186 aaPredicted RBP14.23□□□□□ -0.13
HDAC7-226ENST00000547259 DNAH12Q6ZR08 3092 aa14.22□□□□□ -0.13
HDAC7-226ENST00000547259 STRNO43815 780 aa14.22□□□□□ -0.13
HDAC7-226ENST00000547259 HOXC6P09630 235 aa14.22□□□□□ -0.13
HDAC7-226ENST00000547259 COL6A1P12109 1028 aa14.22□□□□□ -0.13
HDAC7-226ENST00000547259 PTPREP23469 700 aa14.22□□□□□ -0.13
HDAC7-226ENST00000547259 JAG1P78504 1218 aa14.22□□□□□ -0.13
HDAC7-226ENST00000547259 ATP2B2Q01814 1243 aa14.22□□□□□ -0.13
HDAC7-226ENST00000547259 WDR78Q5VTH9 848 aa14.22□□□□□ -0.13
HDAC7-226ENST00000547259 SLC44A5Q8NCS7 719 aa14.22□□□□□ -0.13
HDAC7-226ENST00000547259 STAG1Q8WVM7 1258 aa14.22□□□□□ -0.13
HDAC7-226ENST00000547259 MKNK2Q9HBH9 465 aa14.22□□□□□ -0.13
HDAC7-226ENST00000547259 SLC5A4Q9NY91 659 aa14.22□□□□□ -0.13
HDAC7-226ENST00000547259 SNX14Q9Y5W7 946 aa14.22□□□□□ -0.13
HDAC7-226ENST00000547259 TAF6LQ9Y6J9 622 aa14.22□□□□□ -0.13
HDAC7-226ENST00000547259 GREB1LQ9C091 1923 aaPredicted RBP14.21□□□□□ -0.13
HDAC7-226ENST00000547259 NEDD4P46934 1319 aa14.21□□□□□ -0.13
HDAC7-226ENST00000547259 E7EWF7 191 aa14.21□□□□□ -0.13
HDAC7-226ENST00000547259 PRDM1O75626 825 aa14.21□□□□□ -0.13
HDAC7-226ENST00000547259 PCP11498 1178 aaKnown RBP14.21□□□□□ -0.13
HDAC7-226ENST00000547259 MAGEA10P43363 369 aaPredicted RBP14.21□□□□□ -0.13
HDAC7-226ENST00000547259 CDK8P49336 464 aa14.21□□□□□ -0.13
HDAC7-226ENST00000547259 GABPAQ06546 454 aa14.21□□□□□ -0.13
HDAC7-226ENST00000547259 TRDNQ13061 729 aa14.21□□□□□ -0.13
HDAC7-226ENST00000547259 KRT32Q14532 448 aa14.21□□□□□ -0.13
HDAC7-226ENST00000547259 RRP12Q5JTH9 1297 aaKnown RBP14.21□□□□□ -0.13
HDAC7-226ENST00000547259 LHX8Q68G74 356 aa14.21□□□□□ -0.13
HDAC7-226ENST00000547259 RALYLQ86SE5 291 aaKnown RBP14.21□□□□□ -0.13
HDAC7-226ENST00000547259 RASEFQ8IZ41 740 aa14.21□□□□□ -0.13
HDAC7-226ENST00000547259 KCNB2Q92953 911 aa14.21□□□□□ -0.13
HDAC7-226ENST00000547259 LRCH3Q96II8 777 aa14.21□□□□□ -0.13
HDAC7-226ENST00000547259 CNNM2Q9H8M5 875 aa14.21□□□□□ -0.13
HDAC7-226ENST00000547259 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.21□□□□□ -0.13
HDAC7-226ENST00000547259 SOX1O00570 391 aaPredicted RBP14.2□□□□□ -0.14
HDAC7-226ENST00000547259 SYN1P17600 705 aa14.2□□□□□ -0.14
HDAC7-226ENST00000547259 VCAM1P19320 739 aa14.2□□□□□ -0.14
HDAC7-226ENST00000547259 CCND3P30281 292 aaPredicted RBP14.2□□□□□ -0.14
HDAC7-226ENST00000547259 SHMT1P34896 483 aa14.2□□□□□ -0.14
HDAC7-226ENST00000547259 ANAPC15P60006 121 aa14.2□□□□□ -0.14
HDAC7-226ENST00000547259 COG2Q14746 738 aa14.2□□□□□ -0.14
HDAC7-226ENST00000547259 ZYXQ15942 572 aaKnown RBP14.2□□□□□ -0.14
HDAC7-226ENST00000547259 STOX1Q6ZVD7 989 aa14.2□□□□□ -0.14
HDAC7-226ENST00000547259 DEFB123Q8N688 67 aa14.2□□□□□ -0.14
HDAC7-226ENST00000547259 MB21D1Q8N884 522 aa14.2□□□□□ -0.14
HDAC7-226ENST00000547259 LPAR1Q92633 364 aa14.2□□□□□ -0.14
HDAC7-226ENST00000547259 TBC1D32Q96NH3 1257 aa14.2□□□□□ -0.14
HDAC7-226ENST00000547259 LBHD1Q9BQE6 289 aaPredicted RBP14.2□□□□□ -0.14
HDAC7-226ENST00000547259 KRT23Q9C075 422 aa14.2□□□□□ -0.14
HDAC7-226ENST00000547259 INCENPQ9NQS7 918 aa14.2□□□□□ -0.14
HDAC7-226ENST00000547259 PRKAG2Q9UGJ0 569 aa14.2□□□□□ -0.14
HDAC7-226ENST00000547259 PFASO15067 1338 aa14.19□□□□□ -0.14
HDAC7-226ENST00000547259 DLL1O00548 723 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms