RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 ELF1P32519 619 aa12.01□□□□□ -0.49
NPAS3-205ENST00000547068 CCDC122Q5T0U0 273 aa12.01□□□□□ -0.49
NPAS3-205ENST00000547068 XAGE3Q8WTP9 111 aa12.01□□□□□ -0.49
NPAS3-205ENST00000547068 ANGEL1Q9UNK9 670 aaKnown RBP12.01□□□□□ -0.49
NPAS3-205ENST00000547068 REXO2Q9Y3B8 237 aaKnown RBP12.01□□□□□ -0.49
NPAS3-205ENST00000547068 LOC102724428A0A0B4J2F2 783 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 FOXP2O15409 715 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 STARD3NLO95772 234 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 AFMP43652 599 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 SIK1P57059 783 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 SKOR1P84550 965 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 TRIM14Q14142 442 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 COPS6Q7L5N1 327 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 PTF1AQ7RTS3 328 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 MICU3Q86XE3 530 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 RUFY1Q96T51 708 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 HINFPQ9BQA5 517 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 WDR19Q8NEZ3 1342 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 UBR2Q8IWV8 1755 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 BRD2P25440 801 aaKnown RBP12□□□□□ -0.49
NPAS3-205ENST00000547068 NF2P35240 595 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 TOB1P50616 345 aaPredicted RBP12□□□□□ -0.49
NPAS3-205ENST00000547068 PDCLQ13371 301 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 KRT31Q15323 416 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 IQCEQ6IPM2 695 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 MICALCLQ6ZW33 695 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 SMYD4Q8IYR2 804 aaPredicted RBP12□□□□□ -0.49
NPAS3-205ENST00000547068 RRP36Q96EU6 259 aaKnown RBP12□□□□□ -0.49
NPAS3-205ENST00000547068 VPS16Q9H269 839 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 MCM8Q9UJA3 840 aa12□□□□□ -0.49
NPAS3-205ENST00000547068 KCPQ6ZWJ8 1503 aa11.99□□□□□ -0.49
NPAS3-205ENST00000547068 CCDC189A1A4V9 331 aa11.99□□□□□ -0.49
NPAS3-205ENST00000547068 BTBD18B2RXH4 712 aa11.99□□□□□ -0.49
NPAS3-205ENST00000547068 FKBP4Q02790 459 aaKnown RBP eCLIP11.99□□□□□ -0.49
NPAS3-205ENST00000547068 C2orf54Q08AI8 447 aa11.99□□□□□ -0.49
NPAS3-205ENST00000547068 SF3B2Q13435 895 aaKnown RBP11.99□□□□□ -0.49
NPAS3-205ENST00000547068 ZNF579Q8NAF0 562 aaKnown RBP11.99□□□□□ -0.49
NPAS3-205ENST00000547068 MIEF2Q96C03 454 aa11.99□□□□□ -0.49
NPAS3-205ENST00000547068 BTAF1O14981 1849 aa11.99□□□□□ -0.49
NPAS3-205ENST00000547068 ZNF185O15231 689 aa11.99□□□□□ -0.49
NPAS3-205ENST00000547068 SAFBQ15424 915 aaKnown RBP eCLIP11.99□□□□□ -0.49
NPAS3-205ENST00000547068 APOA5Q6Q788 366 aa11.99□□□□□ -0.49
NPAS3-205ENST00000547068 USP49Q70CQ1 688 aa11.99□□□□□ -0.49
NPAS3-205ENST00000547068 EHBP1Q8NDI1 1231 aa11.99□□□□□ -0.49
NPAS3-205ENST00000547068 N4BP2L2Q92802 583 aaPredicted RBP11.99□□□□□ -0.49
NPAS3-205ENST00000547068 VEZTQ9HBM0 779 aa11.99□□□□□ -0.49
NPAS3-205ENST00000547068 KLC4Q9NSK0 619 aa11.99□□□□□ -0.49
NPAS3-205ENST00000547068 TFR2Q9UP52 801 aa11.99□□□□□ -0.49
NPAS3-205ENST00000547068 UBN2Q6ZU65 1347 aa11.99□□□□□ -0.49
NPAS3-205ENST00000547068 UBE2Q2LH0YL09 131 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 PDE2AO00408 941 aaPredicted RBP11.98□□□□□ -0.49
NPAS3-205ENST00000547068 ZEB2O60315 1214 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 COBLO75128 1261 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 EPB41P11171 864 aaKnown RBP11.98□□□□□ -0.49
NPAS3-205ENST00000547068 CASP1P29466 404 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 PREPLQ4J6C6 727 aaPredicted RBP11.98□□□□□ -0.49
NPAS3-205ENST00000547068 TTMPQ5BVD1 217 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 RILPL1Q5EBL4 403 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 LMBR1LQ6UX01 489 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 ANKRD13DQ6ZTN6 518 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 YTHDF3Q7Z739 585 aaKnown RBP11.98□□□□□ -0.49
NPAS3-205ENST00000547068 DNAJC10Q8IXB1 793 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 AIDAQ96BJ3 306 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 ARL8AQ96BM9 186 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 CSRNP2Q9H175 543 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 CTNND2Q9UQB3 1225 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 SRPRBQ9Y5M8 271 aaKnown RBP11.98□□□□□ -0.49
NPAS3-205ENST00000547068 A0A087WZG4 1122 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 PPP1R3GB7ZBB8 358 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 KRT86O43790 486 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 RANBP6O60518 1105 aaKnown RBP11.98□□□□□ -0.49
NPAS3-205ENST00000547068 HMGB2P26583 209 aaKnown RBP11.98□□□□□ -0.49
NPAS3-205ENST00000547068 COPB1P53618 953 aaKnown RBP11.98□□□□□ -0.49
NPAS3-205ENST00000547068 RNF187Q5TA31 235 aaPredicted RBP11.98□□□□□ -0.49
NPAS3-205ENST00000547068 KIAA1328Q86T90 577 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 SLC26A6Q9BXS9 759 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 JADE2Q9NQC1 790 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 LIMA1Q9UHB6 759 aaKnown RBP11.98□□□□□ -0.49
NPAS3-205ENST00000547068 ODF2LQ9ULJ1 636 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 PCDHB6Q9Y5E3 794 aa11.98□□□□□ -0.49
NPAS3-205ENST00000547068 DDX60Q8IY21 1712 aaKnown RBP11.97□□□□□ -0.49
NPAS3-205ENST00000547068 SH2B2O14492 632 aaPredicted RBP11.97□□□□□ -0.49
NPAS3-205ENST00000547068 ZBTB43O43298 467 aa11.97□□□□□ -0.49
NPAS3-205ENST00000547068 HSF2BPO75031 334 aa11.97□□□□□ -0.49
NPAS3-205ENST00000547068 APBA3O96018 575 aa11.97□□□□□ -0.49
NPAS3-205ENST00000547068 ATP1A2P50993 1020 aa11.97□□□□□ -0.49
NPAS3-205ENST00000547068 NAP1L1P55209 391 aaKnown RBP11.97□□□□□ -0.49
NPAS3-205ENST00000547068 HERVK_113P62684 666 aa11.97□□□□□ -0.49
NPAS3-205ENST00000547068 SSRP1Q08945 709 aaKnown RBP11.97□□□□□ -0.49
NPAS3-205ENST00000547068 NTRK3Q16288 839 aa11.97□□□□□ -0.49
NPAS3-205ENST00000547068 CCDC40Q4G0X9 1142 aa11.97□□□□□ -0.49
NPAS3-205ENST00000547068 HSP90AB3PQ58FF7 597 aa11.97□□□□□ -0.49
NPAS3-205ENST00000547068 NFXL1Q6ZNB6 911 aa11.97□□□□□ -0.49
NPAS3-205ENST00000547068 ATG9AQ7Z3C6 839 aa11.97□□□□□ -0.49
NPAS3-205ENST00000547068 DIS3L2Q8IYB7 885 aaKnown RBP11.97□□□□□ -0.49
NPAS3-205ENST00000547068 CENPHQ9H3R5 247 aa11.97□□□□□ -0.49
NPAS3-205ENST00000547068 GPR108Q9NPR9 543 aa11.97□□□□□ -0.49
NPAS3-205ENST00000547068 TAB2Q9NYJ8 693 aa11.97□□□□□ -0.49
NPAS3-205ENST00000547068 DENND2AQ9ULE3 1009 aa11.97□□□□□ -0.49
NPAS3-205ENST00000547068 LRRC10BA6NIK2 292 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 261.4 ms