RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 TNPO2O14787 897 aaKnown RBP20.51■□□□□ 0.87
CD9-211ENST00000546073 FDX1P10109 184 aa20.51■□□□□ 0.87
CD9-211ENST00000546073 PSMC4P43686 418 aa20.51■□□□□ 0.87
CD9-211ENST00000546073 PRMT2P55345 433 aa20.51■□□□□ 0.87
CD9-211ENST00000546073 PLS1Q14651 629 aa20.51■□□□□ 0.87
CD9-211ENST00000546073 NECTIN1Q15223 517 aa20.51■□□□□ 0.87
CD9-211ENST00000546073 WDR78Q5VTH9 848 aa20.51■□□□□ 0.87
CD9-211ENST00000546073 TMTC2Q8N394 836 aa20.51■□□□□ 0.87
CD9-211ENST00000546073 PRPF38AQ8NAV1 312 aaKnown RBP20.51■□□□□ 0.87
CD9-211ENST00000546073 GMCL1Q96IK5 515 aa20.51■□□□□ 0.87
CD9-211ENST00000546073 SLF1Q9BQI6 1058 aa20.51■□□□□ 0.87
CD9-211ENST00000546073 GTF3C3Q9Y5Q9 886 aa20.51■□□□□ 0.87
CD9-211ENST00000546073 TNKSO95271 1327 aa20.51■□□□□ 0.87
CD9-211ENST00000546073 BCRP11274 1271 aa20.5■□□□□ 0.87
CD9-211ENST00000546073 PSMA5P28066 241 aa20.5■□□□□ 0.87
CD9-211ENST00000546073 DSG3P32926 999 aa20.5■□□□□ 0.87
CD9-211ENST00000546073 STAT2P52630 851 aa20.5■□□□□ 0.87
CD9-211ENST00000546073 WTAPQ15007 396 aa20.5■□□□□ 0.87
CD9-211ENST00000546073 RCSD1Q6JBY9 416 aa20.5■□□□□ 0.87
CD9-211ENST00000546073 NFXL1Q6ZNB6 911 aa20.5■□□□□ 0.87
CD9-211ENST00000546073 TNS4Q8IZW8 715 aa20.5■□□□□ 0.87
CD9-211ENST00000546073 TMEM47Q9BQJ4 181 aa20.5■□□□□ 0.87
CD9-211ENST00000546073 IVNS1ABPQ9Y6Y0 642 aa20.5■□□□□ 0.87
CD9-211ENST00000546073 MAPK4P31152 587 aa20.49■□□□□ 0.87
CD9-211ENST00000546073 COPB2P35606 906 aa20.49■□□□□ 0.87
CD9-211ENST00000546073 TMEM67Q5HYA8 995 aa20.49■□□□□ 0.87
CD9-211ENST00000546073 LBX2Q6XYB7 198 aa20.49■□□□□ 0.87
CD9-211ENST00000546073 SYNE3Q6ZMZ3 975 aa20.49■□□□□ 0.87
CD9-211ENST00000546073 KIFC2Q96AC6 838 aa20.49■□□□□ 0.87
CD9-211ENST00000546073 NEK1Q96PY6 1258 aa20.49■□□□□ 0.87
CD9-211ENST00000546073 MTA3Q9BTC8 594 aa20.49■□□□□ 0.87
CD9-211ENST00000546073 MORF4L1Q9UBU8 362 aa20.49■□□□□ 0.87
CD9-211ENST00000546073 TMEM232C9JQI7 657 aa20.48■□□□□ 0.87
CD9-211ENST00000546073 ECM2O94769 699 aaPredicted RBP20.48■□□□□ 0.87
CD9-211ENST00000546073 ERVK-9P63128 1117 aa20.48■□□□□ 0.87
CD9-211ENST00000546073 ERVK-24P63145 666 aa20.48■□□□□ 0.87
CD9-211ENST00000546073 GPATCH4Q5T3I0 446 aaKnown RBP20.48■□□□□ 0.87
CD9-211ENST00000546073 CATIPQ7Z7H3 387 aa20.48■□□□□ 0.87
CD9-211ENST00000546073 PNMA1Q8ND90 353 aa20.48■□□□□ 0.87
CD9-211ENST00000546073 TMEM87BQ96K49 555 aa20.48■□□□□ 0.87
CD9-211ENST00000546073 PPP1R9AQ9ULJ8 1098 aa20.48■□□□□ 0.87
CD9-211ENST00000546073 TACC3Q9Y6A5 838 aa20.48■□□□□ 0.87
CD9-211ENST00000546073 CCDC69A6NI79 296 aa20.47■□□□□ 0.87
CD9-211ENST00000546073 SPDYE16A6NNV3 312 aaPredicted RBP20.47■□□□□ 0.87
CD9-211ENST00000546073 RAET1EQ8TD07 263 aa20.47■□□□□ 0.87
CD9-211ENST00000546073 ANKS1AQ92625 1134 aa20.47■□□□□ 0.87
CD9-211ENST00000546073 NUP88Q99567 741 aaPredicted RBP20.47■□□□□ 0.87
CD9-211ENST00000546073 PNMA2Q9UL42 364 aa20.47■□□□□ 0.87
CD9-211ENST00000546073 PHIPQ8WWQ0 1821 aa20.47■□□□□ 0.87
CD9-211ENST00000546073 PRC1O43663 620 aa20.46■□□□□ 0.87
CD9-211ENST00000546073 SLC25A27O95847 323 aa20.46■□□□□ 0.87
CD9-211ENST00000546073 NOVP48745 357 aa20.46■□□□□ 0.87
CD9-211ENST00000546073 COL13A1Q5TAT6 717 aaPredicted RBP20.46■□□□□ 0.87
CD9-211ENST00000546073 NBPF11Q86T75 865 aa20.46■□□□□ 0.87
CD9-211ENST00000546073 ENAHQ8N8S7 591 aaPredicted RBP20.46■□□□□ 0.87
CD9-211ENST00000546073 CHMP4CQ96CF2 233 aa20.46■□□□□ 0.87
CD9-211ENST00000546073 RBPJLQ9UBG7 517 aa20.46■□□□□ 0.87
CD9-211ENST00000546073 ADGRA2Q96PE1 1338 aa20.46■□□□□ 0.87
CD9-211ENST00000546073 DHX16O60231 1041 aaKnown RBP20.45■□□□□ 0.86
CD9-211ENST00000546073 PARP1P09874 1014 aaKnown RBP20.45■□□□□ 0.86
CD9-211ENST00000546073 HSPA4P34932 840 aa20.45■□□□□ 0.86
CD9-211ENST00000546073 TSGA10IPQ3SY00 556 aa20.45■□□□□ 0.86
CD9-211ENST00000546073 KIAA1755Q5JYT7 1200 aa20.45■□□□□ 0.86
CD9-211ENST00000546073 FBXO46Q6PJ61 603 aaPredicted RBP20.45■□□□□ 0.86
CD9-211ENST00000546073 KCTD1Q719H9 257 aa20.45■□□□□ 0.86
CD9-211ENST00000546073 OTOP1Q7RTM1 612 aa20.45■□□□□ 0.86
CD9-211ENST00000546073 ATG4CQ96DT6 458 aa20.45■□□□□ 0.86
CD9-211ENST00000546073 UPF2Q9HAU5 1272 aaKnown RBP20.45■□□□□ 0.86
CD9-211ENST00000546073 SLC5A4Q9NY91 659 aa20.45■□□□□ 0.86
CD9-211ENST00000546073 VWA5AO00534 786 aa20.44■□□□□ 0.86
CD9-211ENST00000546073 PLA2G6O60733 806 aa20.44■□□□□ 0.86
CD9-211ENST00000546073 SLC4A3P48751 1232 aa20.44■□□□□ 0.86
CD9-211ENST00000546073 ASPRV1Q53RT3 343 aa20.44■□□□□ 0.86
CD9-211ENST00000546073 BLOC1S2Q6QNY1 142 aa20.44■□□□□ 0.86
CD9-211ENST00000546073 CYB5R4Q7L1T6 521 aa20.44■□□□□ 0.86
CD9-211ENST00000546073 NCAPG2Q86XI2 1143 aa20.44■□□□□ 0.86
CD9-211ENST00000546073 SPATC1LQ9H0A9 340 aa20.44■□□□□ 0.86
CD9-211ENST00000546073 MROH8Q9H579 483 aa20.44■□□□□ 0.86
CD9-211ENST00000546073 GPCPD1Q9NPB8 672 aa20.44■□□□□ 0.86
CD9-211ENST00000546073 LOC285556D6RIA3 1793 aa20.44■□□□□ 0.86
CD9-211ENST00000546073 CALM1P0DP23 149 aa20.43■□□□□ 0.86
CD9-211ENST00000546073 CALM2P0DP24 149 aa20.43■□□□□ 0.86
CD9-211ENST00000546073 CALM3P0DP25 149 aa20.43■□□□□ 0.86
CD9-211ENST00000546073 STAT3P40763 770 aa20.43■□□□□ 0.86
CD9-211ENST00000546073 DHX32Q7L7V1 743 aaKnown RBP20.43■□□□□ 0.86
CD9-211ENST00000546073 CHST3Q7LGC8 479 aa20.43■□□□□ 0.86
CD9-211ENST00000546073 PLEKHH3Q7Z736 793 aa20.43■□□□□ 0.86
CD9-211ENST00000546073 SOCS4Q8WXH5 440 aa20.43■□□□□ 0.86
CD9-211ENST00000546073 JAKMIP1Q96N16 626 aaKnown RBP20.43■□□□□ 0.86
CD9-211ENST00000546073 NUDT12Q9BQG2 462 aa20.43■□□□□ 0.86
CD9-211ENST00000546073 FBXO28Q9NVF7 368 aa20.43■□□□□ 0.86
CD9-211ENST00000546073 SRRDQ9UH36 339 aa20.43■□□□□ 0.86
CD9-211ENST00000546073 STRNO43815 780 aa20.42■□□□□ 0.86
CD9-211ENST00000546073 PDHBP11177 359 aa20.42■□□□□ 0.86
CD9-211ENST00000546073 KIF5BP33176 963 aa20.42■□□□□ 0.86
CD9-211ENST00000546073 STOX1Q6ZVD7 989 aa20.42■□□□□ 0.86
CD9-211ENST00000546073 MB21D2Q8IYB1 491 aaPredicted RBP20.42■□□□□ 0.86
CD9-211ENST00000546073 CPXCR1Q8N123 301 aa20.42■□□□□ 0.86
CD9-211ENST00000546073 SHCBP1Q8NEM2 672 aa20.42■□□□□ 0.86
CD9-211ENST00000546073 CTCFLQ8NI51 663 aaPredicted RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms