RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 SYNE3Q6ZMZ3 975 aa21.67■■□□□ 1.06
CCDC189-212ENST00000546006 CHMP4CQ96CF2 233 aa21.67■■□□□ 1.06
CCDC189-212ENST00000546006 NUP88Q99567 741 aaPredicted RBP21.67■■□□□ 1.06
CCDC189-212ENST00000546006 IGF2BP3O00425 579 aaKnown RBP eCLIP21.66■■□□□ 1.06
CCDC189-212ENST00000546006 HOXA7P31268 230 aaPredicted RBP21.66■■□□□ 1.06
CCDC189-212ENST00000546006 EVCP57679 992 aa21.66■■□□□ 1.06
CCDC189-212ENST00000546006 PABPC4Q13310 644 aaKnown RBP eCLIP21.66■■□□□ 1.06
CCDC189-212ENST00000546006 APOA5Q6Q788 366 aa21.66■■□□□ 1.06
CCDC189-212ENST00000546006 IFNL1Q8IU54 200 aa21.66■■□□□ 1.06
CCDC189-212ENST00000546006 FAM43AQ8N2R8 423 aa21.66■■□□□ 1.06
CCDC189-212ENST00000546006 MYL10Q9BUA6 226 aa21.66■■□□□ 1.06
CCDC189-212ENST00000546006 SLC45A1Q9Y2W3 748 aa21.66■■□□□ 1.06
CCDC189-212ENST00000546006 THSD7BQ9C0I4 1608 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 USP17L15C9J2P7 530 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 USP17L13C9JLJ4 530 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 USP17L11C9JVI0 530 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 USP17L18D6R9N7 530 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 USP17L22D6RA61 530 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 USP17L17D6RBQ6 530 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 USP17L19D6RCP7 530 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 USP17L20D6RJB6 530 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 CALM1P0DP23 149 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 CALM2P0DP24 149 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 CALM3P0DP25 149 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 USP17L24Q0WX57 530 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 CCDC96Q2M329 555 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 CATSPERGQ6ZRH7 1159 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 NUP133Q8WUM0 1156 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 MAP3K14Q99558 947 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 TANGO6Q9C0B7 1094 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 PDHXO00330 501 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 ZNF543Q08ER8 600 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 GRM4Q14833 912 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 OTUD7BQ6GQQ9 843 aa21.65■■□□□ 1.06
CCDC189-212ENST00000546006 ZCCHC17Q9NP64 241 aaKnown RBP21.65■■□□□ 1.06
CCDC189-212ENST00000546006 ISY1Q9ULR0 285 aaKnown RBP21.65■■□□□ 1.06
CCDC189-212ENST00000546006 FRMPD2Q68DX3 1309 aaPredicted RBP21.64■■□□□ 1.05
CCDC189-212ENST00000546006 ZBTB43O43298 467 aa21.64■■□□□ 1.05
CCDC189-212ENST00000546006 ST18O60284 1047 aa21.64■■□□□ 1.05
CCDC189-212ENST00000546006 PARP1P09874 1014 aaKnown RBP21.64■■□□□ 1.05
CCDC189-212ENST00000546006 RCAN1P53805 252 aa21.64■■□□□ 1.05
CCDC189-212ENST00000546006 ASPRV1Q53RT3 343 aa21.64■■□□□ 1.05
CCDC189-212ENST00000546006 GPATCH4Q5T3I0 446 aaKnown RBP21.64■■□□□ 1.05
CCDC189-212ENST00000546006 KCTD1Q719H9 257 aa21.64■■□□□ 1.05
CCDC189-212ENST00000546006 MICU3Q86XE3 530 aa21.64■■□□□ 1.05
CCDC189-212ENST00000546006 RAB11FIP4Q86YS3 637 aa21.64■■□□□ 1.05
CCDC189-212ENST00000546006 LARP6Q9BRS8 491 aaKnown RBP21.64■■□□□ 1.05
CCDC189-212ENST00000546006 NAP1L2Q9ULW6 460 aaPredicted RBP21.64■■□□□ 1.05
CCDC189-212ENST00000546006 GOLGA8BA8MQT2 603 aa21.63■■□□□ 1.05
CCDC189-212ENST00000546006 RXRAP19793 462 aa21.63■■□□□ 1.05
CCDC189-212ENST00000546006 OSBPP22059 807 aa21.63■■□□□ 1.05
CCDC189-212ENST00000546006 CTCFLQ8NI51 663 aaPredicted RBP21.63■■□□□ 1.05
CCDC189-212ENST00000546006 ZNF274Q96GC6 653 aaPredicted RBP21.63■■□□□ 1.05
CCDC189-212ENST00000546006 MAD2L2Q9UI95 211 aa21.63■■□□□ 1.05
CCDC189-212ENST00000546006 FEM1BQ9UK73 627 aa21.63■■□□□ 1.05
CCDC189-212ENST00000546006 PNMA3Q9UL41 463 aa21.63■■□□□ 1.05
CCDC189-212ENST00000546006 PCNTO95613 3336 aa21.63■■□□□ 1.05
CCDC189-212ENST00000546006 PALM3A6NDB9 673 aaPredicted RBP21.62■■□□□ 1.05
CCDC189-212ENST00000546006 TMEM232C9JQI7 657 aa21.62■■□□□ 1.05
CCDC189-212ENST00000546006 GOLGA8HP0CJ92 632 aa21.62■■□□□ 1.05
CCDC189-212ENST00000546006 IRX3P78415 501 aaPredicted RBP21.62■■□□□ 1.05
CCDC189-212ENST00000546006 ASCC2Q9H1I8 757 aaPredicted RBP21.62■■□□□ 1.05
CCDC189-212ENST00000546006 GPCPD1Q9NPB8 672 aa21.62■■□□□ 1.05
CCDC189-212ENST00000546006 TPCN1Q9ULQ1 816 aa21.62■■□□□ 1.05
CCDC189-212ENST00000546006 PLA2G6O60733 806 aa21.61■■□□□ 1.05
CCDC189-212ENST00000546006 FLOT1O75955 427 aa21.61■■□□□ 1.05
CCDC189-212ENST00000546006 PDIA3P30101 505 aaKnown RBP21.61■■□□□ 1.05
CCDC189-212ENST00000546006 KIF5BP33176 963 aa21.61■■□□□ 1.05
CCDC189-212ENST00000546006 STAT2P52630 851 aa21.61■■□□□ 1.05
CCDC189-212ENST00000546006 TTBK2Q6IQ55 1244 aa21.61■■□□□ 1.05
CCDC189-212ENST00000546006 CCDC144CPQ8IYA2 1237 aa21.61■■□□□ 1.05
CCDC189-212ENST00000546006 STAG2Q8N3U4 1231 aa21.61■■□□□ 1.05
CCDC189-212ENST00000546006 FANCBQ8NB91 859 aa21.61■■□□□ 1.05
CCDC189-212ENST00000546006 HPS5Q9UPZ3 1129 aa21.61■■□□□ 1.05
CCDC189-212ENST00000546006 NID2Q14112 1375 aa21.61■■□□□ 1.05
CCDC189-212ENST00000546006 GOLGA8AA7E2F4 631 aa21.6■■□□□ 1.05
CCDC189-212ENST00000546006 ALDH1A1P00352 501 aa21.6■■□□□ 1.05
CCDC189-212ENST00000546006 METAP2P50579 478 aaKnown RBP eCLIP21.6■■□□□ 1.05
CCDC189-212ENST00000546006 COG2Q14746 738 aa21.6■■□□□ 1.05
CCDC189-212ENST00000546006 BTNL9Q6UXG8 535 aa21.6■■□□□ 1.05
CCDC189-212ENST00000546006 NOL8Q76FK4 1167 aaKnown RBP21.6■■□□□ 1.05
CCDC189-212ENST00000546006 FAM160B2Q86V87 743 aa21.6■■□□□ 1.05
CCDC189-212ENST00000546006 CHURC1Q8WUH1 139 aa21.6■■□□□ 1.05
CCDC189-212ENST00000546006 PARK7Q99497 189 aaKnown RBP21.6■■□□□ 1.05
CCDC189-212ENST00000546006 SLF1Q9BQI6 1058 aa21.6■■□□□ 1.05
CCDC189-212ENST00000546006 FBXO28Q9NVF7 368 aa21.6■■□□□ 1.05
CCDC189-212ENST00000546006 DSG3P32926 999 aa21.6■■□□□ 1.05
CCDC189-212ENST00000546006 IKQ13123 557 aaPredicted RBP21.6■■□□□ 1.05
CCDC189-212ENST00000546006 RTN1Q16799 776 aa21.6■■□□□ 1.05
CCDC189-212ENST00000546006 P2RX7Q99572 595 aaKnown RBP21.6■■□□□ 1.05
CCDC189-212ENST00000546006 RBM28Q9NW13 759 aaKnown RBP21.6■■□□□ 1.05
CCDC189-212ENST00000546006 HOXC10Q9NYD6 342 aa21.6■■□□□ 1.05
CCDC189-212ENST00000546006 PPP1R9AQ9ULJ8 1098 aa21.6■■□□□ 1.05
CCDC189-212ENST00000546006 LIMCH1Q9UPQ0 1083 aa21.6■■□□□ 1.05
CCDC189-212ENST00000546006 MYPNQ86TC9 1320 aa21.59■■□□□ 1.05
CCDC189-212ENST00000546006 KLRF2D3W0D1 207 aa21.59■■□□□ 1.05
CCDC189-212ENST00000546006 CYP2C8P10632 490 aa21.59■■□□□ 1.05
CCDC189-212ENST00000546006 SLC16A2P36021 539 aa21.59■■□□□ 1.05
CCDC189-212ENST00000546006 GNAQP50148 359 aa21.59■■□□□ 1.05
CCDC189-212ENST00000546006 PPP2R5BQ15173 497 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms