RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 MYO1AQ9UBC5 1043 aa13.86□□□□□ -0.19
COL4A6-209ENST00000545689 hCG_1984214I3L0E3 225 aa13.86□□□□□ -0.19
COL4A6-209ENST00000545689 NDUFA8P51970 172 aa13.86□□□□□ -0.19
COL4A6-209ENST00000545689 FAM47AQ5JRC9 791 aa13.86□□□□□ -0.19
COL4A6-209ENST00000545689 RRAGAQ7L523 313 aa13.86□□□□□ -0.19
COL4A6-209ENST00000545689 ZNF713Q8N859 430 aaPredicted RBP13.86□□□□□ -0.19
COL4A6-209ENST00000545689 GAS8O95995 478 aa13.86□□□□□ -0.19
COL4A6-209ENST00000545689 PKP1Q13835 747 aa13.86□□□□□ -0.19
COL4A6-209ENST00000545689 LRRC24Q50LG9 513 aa13.86□□□□□ -0.19
COL4A6-209ENST00000545689 RPN1P04843 607 aaKnown RBP13.86□□□□□ -0.19
COL4A6-209ENST00000545689 MYL1P05976 194 aa13.86□□□□□ -0.19
COL4A6-209ENST00000545689 YWHAEP62258 255 aaKnown RBP13.86□□□□□ -0.19
COL4A6-209ENST00000545689 CCDC110Q8TBZ0 833 aa13.86□□□□□ -0.19
COL4A6-209ENST00000545689 CHURC1Q8WUH1 139 aa13.86□□□□□ -0.19
COL4A6-209ENST00000545689 PCDHB13Q9Y5F0 798 aa13.86□□□□□ -0.19
COL4A6-209ENST00000545689 LAMC1P11047 1609 aa13.86□□□□□ -0.19
COL4A6-209ENST00000545689 ATP8B1O43520 1251 aa13.86□□□□□ -0.19
COL4A6-209ENST00000545689 TMEM87AQ8NBN3 555 aa13.86□□□□□ -0.19
COL4A6-209ENST00000545689 NSUN7Q8NE18 718 aaKnown RBP13.86□□□□□ -0.19
COL4A6-209ENST00000545689 RSRC1Q96IZ7 334 aaKnown RBP13.86□□□□□ -0.19
COL4A6-209ENST00000545689 GOLGA8KD6RF30 607 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 VIMP08670 466 aaKnown RBP13.85□□□□□ -0.19
COL4A6-209ENST00000545689 TCP1P17987 556 aaKnown RBP13.85□□□□□ -0.19
COL4A6-209ENST00000545689 ADKP55263 362 aaKnown RBP13.85□□□□□ -0.19
COL4A6-209ENST00000545689 METTL14Q9HCE5 456 aaKnown RBP13.85□□□□□ -0.19
COL4A6-209ENST00000545689 H0YIN7 160 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 RASEFQ8IZ41 740 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 PNMA1Q8ND90 353 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 LSM14BQ9BX40 385 aaKnown RBP13.85□□□□□ -0.19
COL4A6-209ENST00000545689 FAM204AQ9H8W3 233 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 MAPK8IP2Q13387 824 aaPredicted RBP13.85□□□□□ -0.19
COL4A6-209ENST00000545689 TYW1BQ6NUM6 668 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 AK8Q96MA6 479 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 AMFRQ9UKV5 643 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 CDC42BPGQ6DT37 1551 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 STK10O94804 968 aaKnown RBP13.85□□□□□ -0.19
COL4A6-209ENST00000545689 XRCC5P13010 732 aaKnown RBP13.85□□□□□ -0.19
COL4A6-209ENST00000545689 ADD1P35611 737 aaKnown RBP13.85□□□□□ -0.19
COL4A6-209ENST00000545689 PODXL2Q9NZ53 605 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 CLIC4Q9Y696 253 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 RPAP1Q9BWH6 1393 aaPredicted RBP13.85□□□□□ -0.19
COL4A6-209ENST00000545689 H0YCG3 227 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 CIB2O75838 187 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 APBA1Q02410 837 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 PPFIBP2Q8ND30 876 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 IPO4Q8TEX9 1081 aaKnown RBP13.85□□□□□ -0.19
COL4A6-209ENST00000545689 TEKT1Q969V4 418 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 ANAPC4Q9UJX5 808 aa13.85□□□□□ -0.19
COL4A6-209ENST00000545689 HPDP32754 393 aaPredicted RBP13.84□□□□□ -0.19
COL4A6-209ENST00000545689 IL6STP40189 918 aaPredicted RBP13.84□□□□□ -0.19
COL4A6-209ENST00000545689 SPATS2Q86XZ4 545 aaKnown RBP13.84□□□□□ -0.19
COL4A6-209ENST00000545689 C2CD5Q86YS7 1000 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 CARD10Q9BWT7 1032 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 STK32BQ9NY57 414 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 BIN2Q9UBW5 565 aaPredicted RBP13.84□□□□□ -0.19
COL4A6-209ENST00000545689 INPP5BP32019 993 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 ATP11AP98196 1134 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 CHRNDQ07001 517 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 ADCK5Q3MIX3 580 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 CFAP157Q5JU67 520 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 DAAM2Q86T65 1068 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 HSPA2P54652 639 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 GPBP1Q86WP2 473 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 GABPB2Q8TAK5 448 aaPredicted RBP13.84□□□□□ -0.19
COL4A6-209ENST00000545689 RCOR1Q9UKL0 485 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 SND1Q7KZF4 910 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL4A6-209ENST00000545689 OTUD6AQ7L8S5 288 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL4A6-209ENST00000545689 PKD2L1Q9P0L9 805 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 RFX7Q2KHR2 1363 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 CDC42BPAQ5VT25 1732 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 NELFCDQ8IXH7 590 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 CLTCL1P53675 1640 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 MED14O60244 1454 aa13.84□□□□□ -0.19
COL4A6-209ENST00000545689 CFAP65Q6ZU64 1925 aaKnown RBP13.83□□□□□ -0.19
COL4A6-209ENST00000545689 ROBO2Q9HCK4 1378 aa13.83□□□□□ -0.19
COL4A6-209ENST00000545689 STAT1P42224 750 aa13.83□□□□□ -0.19
COL4A6-209ENST00000545689 DPH6Q7L8W6 267 aa13.83□□□□□ -0.19
COL4A6-209ENST00000545689 NLRX1Q86UT6 975 aa13.83□□□□□ -0.19
COL4A6-209ENST00000545689 ZNF354CQ86Y25 554 aa13.83□□□□□ -0.19
COL4A6-209ENST00000545689 VTI1AQ96AJ9 217 aa13.83□□□□□ -0.19
COL4A6-209ENST00000545689 FAM207AQ9NSI2 230 aaPredicted RBP13.83□□□□□ -0.19
COL4A6-209ENST00000545689 FANCLQ9NW38 375 aa13.83□□□□□ -0.19
COL4A6-209ENST00000545689 NPHP4O75161 1426 aaPredicted RBP13.83□□□□□ -0.2
COL4A6-209ENST00000545689 CROCC2H7BZ55 1655 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 A2ML1A8K2U0 1454 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 CYP21A2P08686 494 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 GBP1P32455 592 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 ERCC6LQ2NKX8 1250 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 RETREG2Q8NC44 543 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 CDC42BPBQ9Y5S2 1711 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 EEF1GP26641 437 aaKnown RBP13.83□□□□□ -0.2
COL4A6-209ENST00000545689 MAP7D1Q3KQU3 841 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 CEP57Q86XR8 500 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 UNC5CLQ8IV45 518 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 PSTPIP2Q9H939 334 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 MED4Q9NPJ6 270 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 USP40Q9NVE5 1235 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 ABCC12Q96J65 1359 aa13.83□□□□□ -0.2
COL4A6-209ENST00000545689 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms