RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 SLC25A27O95847 323 aa23.69■■□□□ 1.38
CHD4-213ENST00000545584 FAM83BQ5T0W9 1011 aa23.69■■□□□ 1.38
CHD4-213ENST00000545584 CHRDL2Q6WN34 429 aa23.69■■□□□ 1.38
CHD4-213ENST00000545584 C11orf49Q9H6J7 331 aa23.69■■□□□ 1.38
CHD4-213ENST00000545584 FLRT1Q9NZU1 646 aa23.69■■□□□ 1.38
CHD4-213ENST00000545584 STAP2Q9UGK3 403 aa23.69■■□□□ 1.38
CHD4-213ENST00000545584 PRDM1O75626 825 aa23.68■■□□□ 1.38
CHD4-213ENST00000545584 PDE1AP54750 535 aa23.68■■□□□ 1.38
CHD4-213ENST00000545584 TMEM132BQ14DG7 1078 aa23.68■■□□□ 1.38
CHD4-213ENST00000545584 ABRAQ8N0Z2 381 aa23.68■■□□□ 1.38
CHD4-213ENST00000545584 RWDD1Q9H446 243 aaPredicted RBP23.68■■□□□ 1.38
CHD4-213ENST00000545584 FBXO28Q9NVF7 368 aa23.68■■□□□ 1.38
CHD4-213ENST00000545584 CLIP2Q9UDT6 1046 aa23.68■■□□□ 1.38
CHD4-213ENST00000545584 PPP1R9AQ9ULJ8 1098 aa23.68■■□□□ 1.38
CHD4-213ENST00000545584 ADAMTS5Q9UNA0 930 aa23.68■■□□□ 1.38
CHD4-213ENST00000545584 GREB1LQ9C091 1923 aaPredicted RBP23.67■■□□□ 1.38
CHD4-213ENST00000545584 F5H6K3 240 aa23.67■■□□□ 1.38
CHD4-213ENST00000545584 MSCO60682 206 aa23.67■■□□□ 1.38
CHD4-213ENST00000545584 FCER1AP12319 257 aa23.67■■□□□ 1.38
CHD4-213ENST00000545584 CNGA1P29973 690 aa23.67■■□□□ 1.38
CHD4-213ENST00000545584 KLRC3Q07444 240 aa23.67■■□□□ 1.38
CHD4-213ENST00000545584 PPARAQ07869 468 aa23.67■■□□□ 1.38
CHD4-213ENST00000545584 VWA5AO00534 786 aa23.66■■□□□ 1.38
CHD4-213ENST00000545584 TSPY3P0CV98 308 aa23.66■■□□□ 1.38
CHD4-213ENST00000545584 TSPY8P0CW00 308 aa23.66■■□□□ 1.38
CHD4-213ENST00000545584 CYP2C19P33261 490 aa23.66■■□□□ 1.38
CHD4-213ENST00000545584 COPB2P35606 906 aa23.66■■□□□ 1.38
CHD4-213ENST00000545584 OLFML2BQ68BL8 750 aa23.66■■□□□ 1.38
CHD4-213ENST00000545584 LHX8Q68G74 356 aa23.66■■□□□ 1.38
CHD4-213ENST00000545584 SLF1Q9BQI6 1058 aa23.66■■□□□ 1.38
CHD4-213ENST00000545584 ZNF236Q9UL36 1845 aa23.66■■□□□ 1.38
CHD4-213ENST00000545584 IGKV6D-41A0A0C4DH26 115 aa23.65■■□□□ 1.38
CHD4-213ENST00000545584 NDUFB10O96000 172 aa23.65■■□□□ 1.38
CHD4-213ENST00000545584 STAT3P40763 770 aa23.65■■□□□ 1.38
CHD4-213ENST00000545584 MNX1P50219 401 aaPredicted RBP23.65■■□□□ 1.38
CHD4-213ENST00000545584 RIOX2Q8IUF8 465 aa23.65■■□□□ 1.38
CHD4-213ENST00000545584 CEP95Q96GE4 821 aa23.65■■□□□ 1.38
CHD4-213ENST00000545584 MTMR4Q9NYA4 1195 aa23.65■■□□□ 1.38
CHD4-213ENST00000545584 DDX20Q9UHI6 824 aaKnown RBP23.65■■□□□ 1.38
CHD4-213ENST00000545584 PARP14Q460N5 1801 aa23.65■■□□□ 1.38
CHD4-213ENST00000545584 COBLO75128 1261 aa23.64■■□□□ 1.37
CHD4-213ENST00000545584 TTLL1O95922 423 aa23.64■■□□□ 1.37
CHD4-213ENST00000545584 CCDC129Q6ZRS4 1044 aa23.64■■□□□ 1.37
CHD4-213ENST00000545584 NEDD1Q8NHV4 660 aa23.64■■□□□ 1.37
CHD4-213ENST00000545584 MKL1Q969V6 931 aa23.64■■□□□ 1.37
CHD4-213ENST00000545584 MMP19Q99542 508 aa23.64■■□□□ 1.37
CHD4-213ENST00000545584 NUP88Q99567 741 aaPredicted RBP23.64■■□□□ 1.37
CHD4-213ENST00000545584 LNPKQ9C0E8 428 aa23.64■■□□□ 1.37
CHD4-213ENST00000545584 HELLSQ9NRZ9 838 aa23.64■■□□□ 1.37
CHD4-213ENST00000545584 SYNPO2Q9UMS6 1093 aa23.64■■□□□ 1.37
CHD4-213ENST00000545584 CTDP1Q9Y5B0 961 aaPredicted RBP23.64■■□□□ 1.37
CHD4-213ENST00000545584 TFAP4Q01664 338 aa23.63■■□□□ 1.37
CHD4-213ENST00000545584 KCTD2Q14681 263 aa23.63■■□□□ 1.37
CHD4-213ENST00000545584 TICAM2Q86XR7 235 aa23.63■■□□□ 1.37
CHD4-213ENST00000545584 C7orf61Q8IZ16 206 aa23.63■■□□□ 1.37
CHD4-213ENST00000545584 PRPF38AQ8NAV1 312 aaKnown RBP23.63■■□□□ 1.37
CHD4-213ENST00000545584 FAM47AQ5JRC9 791 aa23.62■■□□□ 1.37
CHD4-213ENST00000545584 PPP4R3BQ5MIZ7 849 aa23.62■■□□□ 1.37
CHD4-213ENST00000545584 B4GALNT3Q6L9W6 998 aa23.62■■□□□ 1.37
CHD4-213ENST00000545584 RBM27Q9P2N5 1060 aaKnown RBP23.62■■□□□ 1.37
CHD4-213ENST00000545584 ZNF214Q9UL59 606 aaPredicted RBP23.62■■□□□ 1.37
CHD4-213ENST00000545584 COL11A1P12107 1806 aaPredicted RBP23.61■■□□□ 1.37
CHD4-213ENST00000545584 MYH4Q9Y623 1939 aa23.61■■□□□ 1.37
CHD4-213ENST00000545584 TRIM6-TRIM34B2RNG4 842 aa23.61■■□□□ 1.37
CHD4-213ENST00000545584 CYBAP13498 195 aa23.61■■□□□ 1.37
CHD4-213ENST00000545584 FXR1P51114 621 aaKnown RBP eCLIP23.61■■□□□ 1.37
CHD4-213ENST00000545584 SMC5Q8IY18 1101 aa23.61■■□□□ 1.37
CHD4-213ENST00000545584 LRRC47Q8N1G4 583 aaKnown RBP23.61■■□□□ 1.37
CHD4-213ENST00000545584 TEX13BQ9BXU2 312 aa23.61■■□□□ 1.37
CHD4-213ENST00000545584 PLIN4Q96Q06 1357 aa23.61■■□□□ 1.37
CHD4-213ENST00000545584 ZBED4O75132 1171 aa23.6■■□□□ 1.37
CHD4-213ENST00000545584 IGHA2P01877 340 aa23.6■■□□□ 1.37
CHD4-213ENST00000545584 COL6A1P12109 1028 aa23.6■■□□□ 1.37
CHD4-213ENST00000545584 GMCL1P1Q8NEA9 526 aa23.6■■□□□ 1.37
CHD4-213ENST00000545584 REPS2Q8NFH8 660 aa23.6■■□□□ 1.37
CHD4-213ENST00000545584 MAML3Q96JK9 1138 aa23.6■■□□□ 1.37
CHD4-213ENST00000545584 PCDH10Q9P2E7 1040 aa23.6■■□□□ 1.37
CHD4-213ENST00000545584 FEM1BQ9UK73 627 aa23.6■■□□□ 1.37
CHD4-213ENST00000545584 PFASO15067 1338 aa23.59■■□□□ 1.37
CHD4-213ENST00000545584 TSPY2A6NKD2 308 aa23.59■■□□□ 1.37
CHD4-213ENST00000545584 MCMDC2Q4G0Z9 681 aa23.59■■□□□ 1.37
CHD4-213ENST00000545584 SLFN13Q68D06 897 aa23.59■■□□□ 1.37
CHD4-213ENST00000545584 SNRNP48Q6IEG0 339 aaKnown RBP23.59■■□□□ 1.37
CHD4-213ENST00000545584 TRPV1Q8NER1 839 aa23.59■■□□□ 1.37
CHD4-213ENST00000545584 KIFC2Q96AC6 838 aa23.59■■□□□ 1.37
CHD4-213ENST00000545584 ISY1Q9ULR0 285 aaKnown RBP23.59■■□□□ 1.37
CHD4-213ENST00000545584 ALPK3Q96L96 1907 aa23.59■■□□□ 1.37
CHD4-213ENST00000545584 TRIOBPQ9H2D6 2365 aa23.58■■□□□ 1.37
CHD4-213ENST00000545584 CTDSPL2Q05D32 466 aa23.58■■□□□ 1.37
CHD4-213ENST00000545584 VPS53Q5VIR6 699 aa23.58■■□□□ 1.37
CHD4-213ENST00000545584 CHD1LQ86WJ1 897 aa23.58■■□□□ 1.37
CHD4-213ENST00000545584 EXOC6Q8TAG9 804 aa23.58■■□□□ 1.37
CHD4-213ENST00000545584 RILPL2Q969X0 211 aa23.58■■□□□ 1.37
CHD4-213ENST00000545584 DIS3Q9Y2L1 958 aaKnown RBP23.58■■□□□ 1.37
CHD4-213ENST00000545584 ZNFX1Q9P2E3 1918 aaKnown RBP23.57■■□□□ 1.36
CHD4-213ENST00000545584 FOXP2O15409 715 aa23.57■■□□□ 1.36
CHD4-213ENST00000545584 SEPT4O43236 478 aa23.57■■□□□ 1.36
CHD4-213ENST00000545584 PGK2P07205 417 aa23.57■■□□□ 1.36
CHD4-213ENST00000545584 BMP3P12645 472 aa23.57■■□□□ 1.36
CHD4-213ENST00000545584 SLC4A3P48751 1232 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms