RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 VCPKMTQ9H867 229 aa17.89■□□□□ 0.45
RTN3-214ENST00000545432 TMEM39AQ9NV64 488 aa17.89■□□□□ 0.45
RTN3-214ENST00000545432 TBX21Q9UL17 535 aa17.89■□□□□ 0.45
RTN3-214ENST00000545432 FLOT1O75955 427 aa17.88■□□□□ 0.45
RTN3-214ENST00000545432 TIMP1P01033 207 aa17.88■□□□□ 0.45
RTN3-214ENST00000545432 TAL1P17542 331 aaPredicted RBP17.88■□□□□ 0.45
RTN3-214ENST00000545432 CDK7P50613 346 aa17.88■□□□□ 0.45
RTN3-214ENST00000545432 MSL3Q8N5Y2 521 aaKnown RBP17.88■□□□□ 0.45
RTN3-214ENST00000545432 DCP1AQ9NPI6 582 aaPredicted RBP17.88■□□□□ 0.45
RTN3-214ENST00000545432 SWAP70Q9UH65 585 aa17.88■□□□□ 0.45
RTN3-214ENST00000545432 MAGEB6P1A0A0J9YX57 407 aa17.87■□□□□ 0.45
RTN3-214ENST00000545432 MOXD2PA6NHM9 499 aa17.87■□□□□ 0.45
RTN3-214ENST00000545432 WDR46O15213 610 aaKnown RBP17.87■□□□□ 0.45
RTN3-214ENST00000545432 BCAR3O75815 825 aa17.87■□□□□ 0.45
RTN3-214ENST00000545432 MYCNP04198 464 aaPredicted RBP17.87■□□□□ 0.45
RTN3-214ENST00000545432 AKR1A1P14550 325 aa17.87■□□□□ 0.45
RTN3-214ENST00000545432 OS9Q13438 667 aaPredicted RBP17.87■□□□□ 0.45
RTN3-214ENST00000545432 MFSD5Q6N075 450 aa17.87■□□□□ 0.45
RTN3-214ENST00000545432 TMEM57Q8N5G2 664 aa17.87■□□□□ 0.45
RTN3-214ENST00000545432 REPS2Q8NFH8 660 aa17.87■□□□□ 0.45
RTN3-214ENST00000545432 TIFAQ96CG3 184 aa17.87■□□□□ 0.45
RTN3-214ENST00000545432 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.87■□□□□ 0.45
RTN3-214ENST00000545432 CRNKL1Q9BZJ0 848 aaKnown RBP17.87■□□□□ 0.45
RTN3-214ENST00000545432 MCM9Q9NXL9 1143 aa17.87■□□□□ 0.45
RTN3-214ENST00000545432 TCRBV5S4A2TA0A5A2 114 aa17.86■□□□□ 0.45
RTN3-214ENST00000545432 DCDC2CA8MYV0 355 aa17.86■□□□□ 0.45
RTN3-214ENST00000545432 PQBP1O60828 265 aaKnown RBP17.86■□□□□ 0.45
RTN3-214ENST00000545432 CST5P28325 142 aaPredicted RBP17.86■□□□□ 0.45
RTN3-214ENST00000545432 ACLYP53396 1101 aa17.86■□□□□ 0.45
RTN3-214ENST00000545432 TMEM240Q5SV17 173 aa17.86■□□□□ 0.45
RTN3-214ENST00000545432 MAMDC4Q6UXC1 1216 aa17.86■□□□□ 0.45
RTN3-214ENST00000545432 SLC44A5Q8NCS7 719 aa17.86■□□□□ 0.45
RTN3-214ENST00000545432 MMP19Q99542 508 aa17.86■□□□□ 0.45
RTN3-214ENST00000545432 ZNF214Q9UL59 606 aaPredicted RBP17.86■□□□□ 0.45
RTN3-214ENST00000545432 ELP1O95163 1332 aa17.86■□□□□ 0.45
RTN3-214ENST00000545432 MPHOSPH10O00566 681 aaKnown RBP17.85■□□□□ 0.45
RTN3-214ENST00000545432 STAT3P40763 770 aa17.85■□□□□ 0.45
RTN3-214ENST00000545432 PLS1Q14651 629 aa17.85■□□□□ 0.45
RTN3-214ENST00000545432 NUP133Q8WUM0 1156 aa17.85■□□□□ 0.45
RTN3-214ENST00000545432 CLUAP1Q96AJ1 413 aa17.85■□□□□ 0.45
RTN3-214ENST00000545432 CCDC17Q96LX7 622 aa17.85■□□□□ 0.45
RTN3-214ENST00000545432 ASB2Q96Q27 587 aa17.85■□□□□ 0.45
RTN3-214ENST00000545432 PBX4Q9BYU1 374 aa17.85■□□□□ 0.45
RTN3-214ENST00000545432 SH2D4AQ9H788 454 aa17.85■□□□□ 0.45
RTN3-214ENST00000545432 ARHGEF10LQ9HCE6 1279 aa17.85■□□□□ 0.45
RTN3-214ENST00000545432 ZNFX1Q9P2E3 1918 aaKnown RBP17.85■□□□□ 0.45
RTN3-214ENST00000545432 VWA5AO00534 786 aa17.84■□□□□ 0.45
RTN3-214ENST00000545432 PGK2P07205 417 aa17.84■□□□□ 0.45
RTN3-214ENST00000545432 AKR1B1P15121 316 aa17.84■□□□□ 0.45
RTN3-214ENST00000545432 PDE6AP16499 860 aa17.84■□□□□ 0.45
RTN3-214ENST00000545432 COPB2P35606 906 aa17.84■□□□□ 0.45
RTN3-214ENST00000545432 NKX3-2P78367 333 aa17.84■□□□□ 0.45
RTN3-214ENST00000545432 KCTD2Q14681 263 aa17.84■□□□□ 0.45
RTN3-214ENST00000545432 TTF1Q15361 905 aaPredicted RBP17.84■□□□□ 0.45
RTN3-214ENST00000545432 STARD7Q9NQZ5 370 aa17.84■□□□□ 0.45
RTN3-214ENST00000545432 MYO9BQ13459 2157 aa17.83■□□□□ 0.45
RTN3-214ENST00000545432 SYNGAP1Q96PV0 1343 aa17.83■□□□□ 0.44
RTN3-214ENST00000545432 SYNRGQ9UMZ2 1314 aa17.83■□□□□ 0.44
RTN3-214ENST00000545432 DNAJC25-GNG10A0A024R161 153 aa17.83■□□□□ 0.44
RTN3-214ENST00000545432 SNAI1O95863 264 aaPredicted RBP17.83■□□□□ 0.44
RTN3-214ENST00000545432 CYP2D6P10635 497 aa17.83■□□□□ 0.44
RTN3-214ENST00000545432 ICA1Q05084 483 aa17.83■□□□□ 0.44
RTN3-214ENST00000545432 PPIGQ13427 754 aaKnown RBP eCLIP17.83■□□□□ 0.44
RTN3-214ENST00000545432 KCNA10Q16322 511 aa17.83■□□□□ 0.44
RTN3-214ENST00000545432 SLC9C2Q5TAH2 1124 aa17.83■□□□□ 0.44
RTN3-214ENST00000545432 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.83■□□□□ 0.44
RTN3-214ENST00000545432 SPICE1Q8N0Z3 855 aa17.83■□□□□ 0.44
RTN3-214ENST00000545432 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.83■□□□□ 0.44
RTN3-214ENST00000545432 FAM184BQ9ULE4 1060 aa17.83■□□□□ 0.44
RTN3-214ENST00000545432 PPP1R9AQ9ULJ8 1098 aa17.83■□□□□ 0.44
RTN3-214ENST00000545432 DUSP11O75319 330 aaKnown RBP17.82■□□□□ 0.44
RTN3-214ENST00000545432 PBX2P40425 430 aa17.82■□□□□ 0.44
RTN3-214ENST00000545432 ADGRE1Q14246 886 aa17.82■□□□□ 0.44
RTN3-214ENST00000545432 SDR42E1Q8WUS8 393 aa17.82■□□□□ 0.44
RTN3-214ENST00000545432 FRAT1Q92837 279 aaPredicted RBP17.82■□□□□ 0.44
RTN3-214ENST00000545432 DYNLL2Q96FJ2 89 aa17.82■□□□□ 0.44
RTN3-214ENST00000545432 GAS2L1Q99501 681 aaPredicted RBP17.82■□□□□ 0.44
RTN3-214ENST00000545432 FBXO28Q9NVF7 368 aa17.82■□□□□ 0.44
RTN3-214ENST00000545432 CNPY2Q9Y2B0 182 aa17.82■□□□□ 0.44
RTN3-214ENST00000545432 PARP14Q460N5 1801 aa17.82■□□□□ 0.44
RTN3-214ENST00000545432 MROH7Q68CQ1 1323 aa17.81■□□□□ 0.44
RTN3-214ENST00000545432 ZNF532Q9HCE3 1301 aa17.81■□□□□ 0.44
RTN3-214ENST00000545432 MRPS5P82675 430 aaKnown RBP17.81■□□□□ 0.44
RTN3-214ENST00000545432 C12orf60Q5U649 245 aa17.81■□□□□ 0.44
RTN3-214ENST00000545432 ZKSCAN2Q63HK3 967 aa17.81■□□□□ 0.44
RTN3-214ENST00000545432 CCDC174Q6PII3 467 aa17.81■□□□□ 0.44
RTN3-214ENST00000545432 ZNF467Q7Z7K2 595 aaPredicted RBP17.81■□□□□ 0.44
RTN3-214ENST00000545432 CLEC10AQ8IUN9 316 aa17.81■□□□□ 0.44
RTN3-214ENST00000545432 LCORLQ8N3X6 602 aa17.81■□□□□ 0.44
RTN3-214ENST00000545432 LENG1Q96BZ8 264 aaPredicted RBP17.81■□□□□ 0.44
RTN3-214ENST00000545432 UPF3AQ9H1J1 476 aaKnown RBP17.81■□□□□ 0.44
RTN3-214ENST00000545432 ATP8A2Q9NTI2 1148 aa17.81■□□□□ 0.44
RTN3-214ENST00000545432 THEGQ9P2T0 379 aa17.81■□□□□ 0.44
RTN3-214ENST00000545432 GRXCR1A8MXD5 290 aa17.8■□□□□ 0.44
RTN3-214ENST00000545432 ATP2A1O14983 1001 aa17.8■□□□□ 0.44
RTN3-214ENST00000545432 CDK8P49336 464 aa17.8■□□□□ 0.44
RTN3-214ENST00000545432 GJA9P57773 515 aa17.8■□□□□ 0.44
RTN3-214ENST00000545432 C16orf86Q6ZW13 317 aa17.8■□□□□ 0.44
RTN3-214ENST00000545432 HERVK_113Q902F9 699 aa17.8■□□□□ 0.44
RTN3-214ENST00000545432 PRDM12Q9H4Q4 367 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms