RNA–Protein interactions for RNA: ENST00000545419.5

RNF10-223, Transcript of ring finger protein 10, human

TSL 5

Gene RNF10, Length 1,336 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF10-223	ENST00000545419	TLR2	O60603	784 aa		9.44	□□□□□ -0.9
RNF10-223	ENST00000545419	FKTN	O75072	461 aa		9.44	□□□□□ -0.9
RNF10-223	ENST00000545419	SHMT1	P34896	483 aa		9.44	□□□□□ -0.9
RNF10-223	ENST00000545419	IRX6	P78412	446 aa	Predicted RBP	9.44	□□□□□ -0.9
RNF10-223	ENST00000545419	CRHR2	Q13324	411 aa		9.44	□□□□□ -0.9
RNF10-223	ENST00000545419	PKN2	Q16513	984 aa	Known RBP	9.44	□□□□□ -0.9
RNF10-223	ENST00000545419	QPCT	Q16769	361 aa		9.44	□□□□□ -0.9
RNF10-223	ENST00000545419	CTR9	Q6PD62	1173 aa		9.44	□□□□□ -0.9
RNF10-223	ENST00000545419	TRIM34	Q9BYJ4	488 aa		9.44	□□□□□ -0.9
RNF10-223	ENST00000545419	AS3MT	Q9HBK9	375 aa		9.44	□□□□□ -0.9
RNF10-223	ENST00000545419	PCDHGC3	Q9UN70	934 aa		9.44	□□□□□ -0.9
RNF10-223	ENST00000545419	SLC27A5	Q9Y2P5	690 aa		9.44	□□□□□ -0.9
RNF10-223	ENST00000545419	SLC4A4	Q9Y6R1	1079 aa		9.44	□□□□□ -0.9
RNF10-223	ENST00000545419	DOCK2	Q92608	1830 aa		9.44	□□□□□ -0.9
RNF10-223	ENST00000545419	PDHX	O00330	501 aa		9.43	□□□□□ -0.9
RNF10-223	ENST00000545419	BACE1	P56817	501 aa		9.43	□□□□□ -0.9
RNF10-223	ENST00000545419	SP3	Q02447	781 aa		9.43	□□□□□ -0.9
RNF10-223	ENST00000545419	C17orf99	Q6UX52	265 aa		9.43	□□□□□ -0.9
RNF10-223	ENST00000545419	IFNL3	Q8IZI9	196 aa		9.43	□□□□□ -0.9
RNF10-223	ENST00000545419	CCDC17	Q96LX7	622 aa		9.43	□□□□□ -0.9
RNF10-223	ENST00000545419	HELLS	Q9NRZ9	838 aa		9.43	□□□□□ -0.9
RNF10-223	ENST00000545419	SWAP70	Q9UH65	585 aa		9.43	□□□□□ -0.9
RNF10-223	ENST00000545419	TRIM75P	A6NK02	468 aa		9.42	□□□□□ -0.9
RNF10-223	ENST00000545419	USP17L10	C9JJH3	530 aa		9.42	□□□□□ -0.9
RNF10-223	ENST00000545419	GPAA1	O43292	621 aa		9.42	□□□□□ -0.9
RNF10-223	ENST00000545419	GH2	P01242	217 aa		9.42	□□□□□ -0.9
RNF10-223	ENST00000545419	HOXA7	P31268	230 aa	Predicted RBP	9.42	□□□□□ -0.9
RNF10-223	ENST00000545419	ARHGEF6	Q15052	776 aa		9.42	□□□□□ -0.9
RNF10-223	ENST00000545419	TAF1C	Q15572	869 aa	Predicted RBP	9.42	□□□□□ -0.9
RNF10-223	ENST00000545419	ALX1	Q15699	326 aa		9.42	□□□□□ -0.9
RNF10-223	ENST00000545419	ABCB5	Q2M3G0	1257 aa		9.42	□□□□□ -0.9
RNF10-223	ENST00000545419	MCMDC2	Q4G0Z9	681 aa		9.42	□□□□□ -0.9
RNF10-223	ENST00000545419	CTU1	Q7Z7A3	348 aa	Known RBP	9.42	□□□□□ -0.9
RNF10-223	ENST00000545419	BANK1	Q8NDB2	785 aa		9.42	□□□□□ -0.9
RNF10-223	ENST00000545419	SEC62	Q99442	399 aa	Known RBP	9.42	□□□□□ -0.9
RNF10-223	ENST00000545419	FSD1	Q9BTV5	496 aa		9.42	□□□□□ -0.9
RNF10-223	ENST00000545419	CABP5	Q9NP86	173 aa		9.42	□□□□□ -0.9
RNF10-223	ENST00000545419	CASP8AP2	Q9UKL3	1982 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419		M0R2C6	588 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	FMNL1	O95466	1100 aa	Predicted RBP	9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	NEFL	P07196	543 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	CYP2D6	P10635	497 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	SDS	P20132	328 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	GUCY1A2	P33402	732 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	CDK8	P49336	464 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	BLOC1S3	Q6QNY0	202 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	C16orf86	Q6ZW13	317 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	SIAH1	Q8IUQ4	282 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	SCUBE3	Q8IX30	993 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	AMOTL1	Q8IY63	956 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	ERO1A	Q96HE7	468 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	NACAP1	Q9BZK3	213 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	MCOLN1	Q9GZU1	580 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	ZBTB21	Q9ULJ3	1066 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	AGTPBP1	Q9UPW5	1226 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	LAMB1	P07942	1786 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	FOCAD	Q5VW36	1801 aa		9.41	□□□□□ -0.9
RNF10-223	ENST00000545419	AP1G2	O75843	785 aa		9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	GDF11	O95390	407 aa		9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	GNRH1	P01148	92 aa		9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	APP	P05067	770 aa		9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	PABPC4	Q13310	644 aa	Known RBP eCLIP	9.4	□□□□□ -0.9	3e-9	■■■■□ 19.6
RNF10-223	ENST00000545419	DGKZ	Q13574	1117 aa		9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	SHROOM1	Q2M3G4	852 aa	Predicted RBP	9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	USP17L2	Q6R6M4	530 aa		9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	GADL1	Q6ZQY3	521 aa		9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	CCDC84	Q86UT8	332 aa	Predicted RBP	9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	TSC1	Q92574	1164 aa		9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	RILPL2	Q969X0	211 aa		9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	RNF166	Q96A37	237 aa	Predicted RBP	9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	DYNLL2	Q96FJ2	89 aa		9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	C12orf42	Q96LP6	360 aa		9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	KIAA1683	Q9H0B3	1180 aa		9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	HCST	Q9UBK5	93 aa		9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	ARPP21	Q9UBL0	812 aa	Predicted RBP	9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	MAST2	Q6P0Q8	1798 aa		9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	OTOF	Q9HC10	1997 aa		9.4	□□□□□ -0.9
RNF10-223	ENST00000545419	CDK5RAP2	Q96SN8	1893 aa		9.4	□□□□□ -0.91
RNF10-223	ENST00000545419	MYH1	P12882	1939 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	CYP2D7	A0A087X1C5	515 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	MINDY4B	A8MYZ0	360 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	SMIM22	K7EJ46	135 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	HIP1	O00291	1037 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	BCR	P11274	1271 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	USP14	P54578	494 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	HMGCS2	P54868	508 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	COPS2	P61201	443 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	SEPT2	Q15019	361 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	RAB3GAP1	Q15042	981 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	SLC4A8	Q2Y0W8	1093 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	TMEM179	Q6ZVK1	233 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	RETREG3	Q86VR2	466 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	SPNS2	Q8IVW8	549 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	ABHD8	Q96I13	439 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	PARK7	Q99497	189 aa	Known RBP	9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	KANSL2	Q9H9L4	492 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	ZNF287	Q9HBT7	754 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	TMOD4	Q9NZQ9	345 aa		9.39	□□□□□ -0.91
RNF10-223	ENST00000545419	ADGRA2	Q96PE1	1338 aa		9.39	□□□□□ -0.91

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