RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 TAL1P17542 331 aaPredicted RBP15.56■□□□□ 0.08
USP28-212ENST00000544750 PLS1Q14651 629 aa15.56■□□□□ 0.08
USP28-212ENST00000544750 GRIN2CQ14957 1233 aa15.56■□□□□ 0.08
USP28-212ENST00000544750 ZKSCAN2Q63HK3 967 aa15.56■□□□□ 0.08
USP28-212ENST00000544750 CLEC10AQ8IUN9 316 aa15.56■□□□□ 0.08
USP28-212ENST00000544750 VCPKMTQ9H867 229 aa15.56■□□□□ 0.08
USP28-212ENST00000544750 MCM9Q9NXL9 1143 aa15.56■□□□□ 0.08
USP28-212ENST00000544750 DIS3Q9Y2L1 958 aaKnown RBP15.56■□□□□ 0.08
USP28-212ENST00000544750 TCRBV5S4A2TA0A5A2 114 aa15.55■□□□□ 0.08
USP28-212ENST00000544750 SLC25A27O95847 323 aa15.55■□□□□ 0.08
USP28-212ENST00000544750 PGK1P00558 417 aa15.55■□□□□ 0.08
USP28-212ENST00000544750 CYP2D6P10635 497 aa15.55■□□□□ 0.08
USP28-212ENST00000544750 RARBP10826 455 aa15.55■□□□□ 0.08
USP28-212ENST00000544750 PDE6AP16499 860 aa15.55■□□□□ 0.08
USP28-212ENST00000544750 HNRNPUQ00839 825 aaKnown RBP eCLIP15.55■□□□□ 0.08
USP28-212ENST00000544750 FAAP100Q0VG06 881 aa15.55■□□□□ 0.08
USP28-212ENST00000544750 ZNF792Q3KQV3 632 aa15.55■□□□□ 0.08
USP28-212ENST00000544750 ANKRD33Q7Z3H0 272 aa15.55■□□□□ 0.08
USP28-212ENST00000544750 RIOX2Q8IUF8 465 aa15.55■□□□□ 0.08
USP28-212ENST00000544750 SDR42E1Q8WUS8 393 aa15.55■□□□□ 0.08
USP28-212ENST00000544750 TOX2Q96NM4 488 aa15.55■□□□□ 0.08
USP28-212ENST00000544750 TINF2Q9BSI4 451 aa15.55■□□□□ 0.08
USP28-212ENST00000544750 CRNKL1Q9BZJ0 848 aaKnown RBP15.55■□□□□ 0.08
USP28-212ENST00000544750 SWAP70Q9UH65 585 aa15.55■□□□□ 0.08
USP28-212ENST00000544750 WDR46O15213 610 aaKnown RBP15.54■□□□□ 0.08
USP28-212ENST00000544750 PGK2P07205 417 aa15.54■□□□□ 0.08
USP28-212ENST00000544750 AKR1B1P15121 316 aa15.54■□□□□ 0.08
USP28-212ENST00000544750 RAG1P15918 1043 aa15.54■□□□□ 0.08
USP28-212ENST00000544750 DNAJB2P25686 324 aa15.54■□□□□ 0.08
USP28-212ENST00000544750 FPGSQ05932 587 aa15.54■□□□□ 0.08
USP28-212ENST00000544750 TJAP1Q5JTD0 557 aa15.54■□□□□ 0.08
USP28-212ENST00000544750 SLC9C2Q5TAH2 1124 aa15.54■□□□□ 0.08
USP28-212ENST00000544750 RNF180Q86T96 592 aa15.54■□□□□ 0.08
USP28-212ENST00000544750 SPICE1Q8N0Z3 855 aa15.54■□□□□ 0.08
USP28-212ENST00000544750 LCORLQ8N3X6 602 aa15.54■□□□□ 0.08
USP28-212ENST00000544750 REPS2Q8NFH8 660 aa15.54■□□□□ 0.08
USP28-212ENST00000544750 DYNLL2Q96FJ2 89 aa15.54■□□□□ 0.08
USP28-212ENST00000544750 ZNF532Q9HCE3 1301 aa15.53■□□□□ 0.08
USP28-212ENST00000544750 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.53■□□□□ 0.08
USP28-212ENST00000544750 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.53■□□□□ 0.08
USP28-212ENST00000544750 SMIM22K7EJ46 135 aa15.53■□□□□ 0.08
USP28-212ENST00000544750 PQBP1O60828 265 aaKnown RBP15.53■□□□□ 0.08
USP28-212ENST00000544750 ICA1Q05084 483 aa15.53■□□□□ 0.08
USP28-212ENST00000544750 CCSAPQ6IQ19 270 aaPredicted RBP15.53■□□□□ 0.08
USP28-212ENST00000544750 AACSQ86V21 672 aa15.53■□□□□ 0.08
USP28-212ENST00000544750 KLHDC9Q8NEP7 349 aa15.53■□□□□ 0.08
USP28-212ENST00000544750 LENG1Q96BZ8 264 aaPredicted RBP15.53■□□□□ 0.08
USP28-212ENST00000544750 MMP19Q99542 508 aa15.53■□□□□ 0.08
USP28-212ENST00000544750 TSEN34Q9BSV6 310 aaKnown RBP15.53■□□□□ 0.08
USP28-212ENST00000544750 ARHGEF10LQ9HCE6 1279 aa15.53■□□□□ 0.08
USP28-212ENST00000544750 TMEM39AQ9NV64 488 aa15.53■□□□□ 0.08
USP28-212ENST00000544750 FBXO28Q9NVF7 368 aa15.53■□□□□ 0.08
USP28-212ENST00000544750 ZNF214Q9UL59 606 aaPredicted RBP15.53■□□□□ 0.08
USP28-212ENST00000544750 MYH4Q9Y623 1939 aa15.53■□□□□ 0.08
USP28-212ENST00000544750 RLBP1P12271 317 aa15.52■□□□□ 0.08
USP28-212ENST00000544750 AKR1A1P14550 325 aa15.52■□□□□ 0.08
USP28-212ENST00000544750 TTF1Q15361 905 aaPredicted RBP15.52■□□□□ 0.08
USP28-212ENST00000544750 RASIP1Q5U651 963 aa15.52■□□□□ 0.08
USP28-212ENST00000544750 CEP85Q6P2H3 762 aa15.52■□□□□ 0.08
USP28-212ENST00000544750 ZNF576Q9H609 170 aa15.52■□□□□ 0.08
USP28-212ENST00000544750 SH2D4AQ9H788 454 aa15.52■□□□□ 0.08
USP28-212ENST00000544750 TBX21Q9UL17 535 aa15.52■□□□□ 0.08
USP28-212ENST00000544750 EXOC6BQ9Y2D4 811 aa15.52■□□□□ 0.08
USP28-212ENST00000544750 VWA5AO00534 786 aa15.51■□□□□ 0.07
USP28-212ENST00000544750 TIMP1P01033 207 aa15.51■□□□□ 0.07
USP28-212ENST00000544750 ACLYP53396 1101 aa15.51■□□□□ 0.07
USP28-212ENST00000544750 C16orf59Q7L2K0 433 aa15.51■□□□□ 0.07
USP28-212ENST00000544750 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.51■□□□□ 0.07
USP28-212ENST00000544750 CCDC17Q96LX7 622 aa15.51■□□□□ 0.07
USP28-212ENST00000544750 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.51■□□□□ 0.07
USP28-212ENST00000544750 CHD7Q9P2D1 2997 aa15.51■□□□□ 0.07
USP28-212ENST00000544750 REV3LO60673 3130 aa15.51■□□□□ 0.07
USP28-212ENST00000544750 ZBED9Q6R2W3 1325 aa15.5■□□□□ 0.07
USP28-212ENST00000544750 SYNRGQ9UMZ2 1314 aa15.5■□□□□ 0.07
USP28-212ENST00000544750 TNFRSF10AO00220 468 aa15.5■□□□□ 0.07
USP28-212ENST00000544750 PRKAB2O43741 272 aa15.5■□□□□ 0.07
USP28-212ENST00000544750 STAT3P40763 770 aa15.5■□□□□ 0.07
USP28-212ENST00000544750 CDK8P49336 464 aa15.5■□□□□ 0.07
USP28-212ENST00000544750 CDK7P50613 346 aa15.5■□□□□ 0.07
USP28-212ENST00000544750 KCTD2Q14681 263 aa15.5■□□□□ 0.07
USP28-212ENST00000544750 C12orf60Q5U649 245 aa15.5■□□□□ 0.07
USP28-212ENST00000544750 ERC1Q8IUD2 1116 aa15.5■□□□□ 0.07
USP28-212ENST00000544750 MSL3Q8N5Y2 521 aaKnown RBP15.5■□□□□ 0.07
USP28-212ENST00000544750 ARMT1Q9H993 441 aa15.5■□□□□ 0.07
USP28-212ENST00000544750 STARD7Q9NQZ5 370 aa15.5■□□□□ 0.07
USP28-212ENST00000544750 PPP1R9AQ9ULJ8 1098 aa15.5■□□□□ 0.07
USP28-212ENST00000544750 MOXD2PA6NHM9 499 aa15.49■□□□□ 0.07
USP28-212ENST00000544750 DCDC2CA8MYV0 355 aa15.49■□□□□ 0.07
USP28-212ENST00000544750 SNAI1O95863 264 aaPredicted RBP15.49■□□□□ 0.07
USP28-212ENST00000544750 EEF2P13639 858 aaKnown RBP15.49■□□□□ 0.07
USP28-212ENST00000544750 CST5P28325 142 aaPredicted RBP15.49■□□□□ 0.07
USP28-212ENST00000544750 TMEM240Q5SV17 173 aa15.49■□□□□ 0.07
USP28-212ENST00000544750 MFSD5Q6N075 450 aa15.49■□□□□ 0.07
USP28-212ENST00000544750 MAMDC4Q6UXC1 1216 aa15.49■□□□□ 0.07
USP28-212ENST00000544750 C16orf86Q6ZW13 317 aa15.49■□□□□ 0.07
USP28-212ENST00000544750 RHPN1Q8TCX5 695 aa15.49■□□□□ 0.07
USP28-212ENST00000544750 TIFAQ96CG3 184 aa15.49■□□□□ 0.07
USP28-212ENST00000544750 PBX4Q9BYU1 374 aa15.49■□□□□ 0.07
USP28-212ENST00000544750 IL1RAPL2Q9NP60 686 aa15.49■□□□□ 0.07
USP28-212ENST00000544750 ATP8A2Q9NTI2 1148 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms