RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 APBA2Q99767 749 aa12.77□□□□□ -0.36
CHEK1-218ENST00000544373 NAPBQ9H115 298 aa12.77□□□□□ -0.36
CHEK1-218ENST00000544373 CLIP2Q9UDT6 1046 aa12.77□□□□□ -0.36
CHEK1-218ENST00000544373 A0A0D9SFI3 127 aa12.77□□□□□ -0.37
CHEK1-218ENST00000544373 CCND3P30281 292 aaPredicted RBP12.77□□□□□ -0.37
CHEK1-218ENST00000544373 MNX1P50219 401 aaPredicted RBP12.77□□□□□ -0.37
CHEK1-218ENST00000544373 NUCB1Q02818 461 aa12.77□□□□□ -0.37
CHEK1-218ENST00000544373 PPARAQ07869 468 aa12.77□□□□□ -0.37
CHEK1-218ENST00000544373 TMEM132BQ14DG7 1078 aa12.77□□□□□ -0.37
CHEK1-218ENST00000544373 FAM47AQ5JRC9 791 aa12.77□□□□□ -0.37
CHEK1-218ENST00000544373 PLEKHM2Q8IWE5 1019 aa12.77□□□□□ -0.37
CHEK1-218ENST00000544373 ZNF444Q8N0Y2 327 aaPredicted RBP12.77□□□□□ -0.37
CHEK1-218ENST00000544373 NPLOC4Q8TAT6 608 aa12.77□□□□□ -0.37
CHEK1-218ENST00000544373 DPF3Q92784 378 aa12.77□□□□□ -0.37
CHEK1-218ENST00000544373 CEP95Q96GE4 821 aa12.77□□□□□ -0.37
CHEK1-218ENST00000544373 PAWRQ96IZ0 340 aaKnown RBP12.77□□□□□ -0.37
CHEK1-218ENST00000544373 NYAP2Q9P242 653 aa12.77□□□□□ -0.37
CHEK1-218ENST00000544373 ADAMTS5Q9UNA0 930 aa12.77□□□□□ -0.37
CHEK1-218ENST00000544373 F5H6K3 240 aa12.76□□□□□ -0.37
CHEK1-218ENST00000544373 NDUFB10O96000 172 aa12.76□□□□□ -0.37
CHEK1-218ENST00000544373 HOXC6P09630 235 aa12.76□□□□□ -0.37
CHEK1-218ENST00000544373 IRX6P78412 446 aaPredicted RBP12.76□□□□□ -0.37
CHEK1-218ENST00000544373 CTDSPL2Q05D32 466 aa12.76□□□□□ -0.37
CHEK1-218ENST00000544373 KLRC3Q07444 240 aa12.76□□□□□ -0.37
CHEK1-218ENST00000544373 MB21D1Q8N884 522 aa12.76□□□□□ -0.37
CHEK1-218ENST00000544373 GOPCQ9HD26 462 aa12.76□□□□□ -0.37
CHEK1-218ENST00000544373 MTMR4Q9NYA4 1195 aa12.76□□□□□ -0.37
CHEK1-218ENST00000544373 IVNS1ABPQ9Y6Y0 642 aa12.76□□□□□ -0.37
CHEK1-218ENST00000544373 TRIM6-TRIM34B2RNG4 842 aa12.75□□□□□ -0.37
CHEK1-218ENST00000544373 VWA5AO00534 786 aa12.75□□□□□ -0.37
CHEK1-218ENST00000544373 COBLO75128 1261 aa12.75□□□□□ -0.37
CHEK1-218ENST00000544373 IGHA2P01877 340 aa12.75□□□□□ -0.37
CHEK1-218ENST00000544373 ADORA2AP29274 412 aa12.75□□□□□ -0.37
CHEK1-218ENST00000544373 TFAP4Q01664 338 aa12.75□□□□□ -0.37
CHEK1-218ENST00000544373 NMIQ13287 307 aaPredicted RBP12.75□□□□□ -0.37
CHEK1-218ENST00000544373 ZNF589Q86UQ0 364 aaPredicted RBP12.75□□□□□ -0.37
CHEK1-218ENST00000544373 NCAPG2Q86XI2 1143 aa12.75□□□□□ -0.37
CHEK1-218ENST00000544373 NEDD1Q8NHV4 660 aa12.75□□□□□ -0.37
CHEK1-218ENST00000544373 MKL1Q969V6 931 aa12.75□□□□□ -0.37
CHEK1-218ENST00000544373 HELLSQ9NRZ9 838 aa12.75□□□□□ -0.37
CHEK1-218ENST00000544373 PPP1R9AQ9ULJ8 1098 aa12.75□□□□□ -0.37
CHEK1-218ENST00000544373 TRIOBPQ9H2D6 2365 aa12.75□□□□□ -0.37
CHEK1-218ENST00000544373 RLFQ13129 1914 aa12.75□□□□□ -0.37
CHEK1-218ENST00000544373 SZT2Q5T011 3432 aa12.74□□□□□ -0.37
CHEK1-218ENST00000544373 CYP2C19P33261 490 aa12.74□□□□□ -0.37
CHEK1-218ENST00000544373 LHX8Q68G74 356 aa12.74□□□□□ -0.37
CHEK1-218ENST00000544373 TRMT44Q8IYL2 757 aaKnown RBP12.74□□□□□ -0.37
CHEK1-218ENST00000544373 LRRC47Q8N1G4 583 aaKnown RBP12.74□□□□□ -0.37
CHEK1-218ENST00000544373 SHCBP1Q8NEM2 672 aa12.74□□□□□ -0.37
CHEK1-218ENST00000544373 REPS2Q8NFH8 660 aa12.74□□□□□ -0.37
CHEK1-218ENST00000544373 RILPL2Q969X0 211 aa12.74□□□□□ -0.37
CHEK1-218ENST00000544373 CHMP4CQ96CF2 233 aa12.74□□□□□ -0.37
CHEK1-218ENST00000544373 ZNF287Q9HBT7 754 aa12.74□□□□□ -0.37
CHEK1-218ENST00000544373 OGDHLQ9ULD0 1010 aa12.74□□□□□ -0.37
CHEK1-218ENST00000544373 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.74□□□□□ -0.37
CHEK1-218ENST00000544373 LAMA3Q16787 3333 aa12.74□□□□□ -0.37
CHEK1-218ENST00000544373 NMT2O60551 498 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 TSPY3P0CV98 308 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 TSPY8P0CW00 308 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 PDE4BQ07343 736 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 MCMDC2Q4G0Z9 681 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 DPP9Q86TI2 863 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 TRPV1Q8NER1 839 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 HTATIP2Q9BUP3 242 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 MROH8Q9H579 483 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 ZNF214Q9UL59 606 aaPredicted RBP12.73□□□□□ -0.37
CHEK1-218ENST00000544373 COLQQ9Y215 455 aaPredicted RBP12.73□□□□□ -0.37
CHEK1-218ENST00000544373 STRNO43815 780 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 TTLL1O95922 423 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 FGAP02671 866 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 SLC3A2P08195 630 aaKnown RBP12.73□□□□□ -0.37
CHEK1-218ENST00000544373 STAT3P40763 770 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 MFSD14CQ5VZR4 134 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 SLF1Q9BQI6 1058 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 OSBPL3Q9H4L5 887 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 IL17RBQ9NRM6 502 aa12.73□□□□□ -0.37
CHEK1-218ENST00000544373 GREB1LQ9C091 1923 aaPredicted RBP12.73□□□□□ -0.37
CHEK1-218ENST00000544373 PGK2P07205 417 aa12.72□□□□□ -0.37
CHEK1-218ENST00000544373 HSPD1P10809 573 aaKnown RBP12.72□□□□□ -0.37
CHEK1-218ENST00000544373 SDSP20132 328 aa12.72□□□□□ -0.37
CHEK1-218ENST00000544373 ALX1Q15699 326 aa12.72□□□□□ -0.37
CHEK1-218ENST00000544373 HABP4Q5JVS0 413 aaKnown RBP12.72□□□□□ -0.37
CHEK1-218ENST00000544373 NECAB2Q7Z6G3 386 aa12.72□□□□□ -0.37
CHEK1-218ENST00000544373 RIOX2Q8IUF8 465 aa12.72□□□□□ -0.37
CHEK1-218ENST00000544373 ANAPC4Q9UJX5 808 aa12.72□□□□□ -0.37
CHEK1-218ENST00000544373 PLIN4Q96Q06 1357 aa12.72□□□□□ -0.37
CHEK1-218ENST00000544373 SLC34A2O95436 690 aa12.71□□□□□ -0.37
CHEK1-218ENST00000544373 PRAMEF19Q5SWL8 479 aa12.71□□□□□ -0.37
CHEK1-218ENST00000544373 SLFN13Q68D06 897 aa12.71□□□□□ -0.37
CHEK1-218ENST00000544373 CHRDL2Q6WN34 429 aa12.71□□□□□ -0.37
CHEK1-218ENST00000544373 ANKLE1Q8NAG6 615 aa12.71□□□□□ -0.37
CHEK1-218ENST00000544373 KIFC2Q96AC6 838 aa12.71□□□□□ -0.37
CHEK1-218ENST00000544373 RIPK3Q9Y572 518 aa12.71□□□□□ -0.37
CHEK1-218ENST00000544373 MYH8P13535 1937 aa12.71□□□□□ -0.37
CHEK1-218ENST00000544373 A0A0G2JMZ2 1700 aa12.71□□□□□ -0.37
CHEK1-218ENST00000544373 RANBP6O60518 1105 aaKnown RBP12.7□□□□□ -0.38
CHEK1-218ENST00000544373 SLC25A27O95847 323 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 FGRP09769 529 aa12.7□□□□□ -0.38
CHEK1-218ENST00000544373 FCER1AP12319 257 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms