RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 SYNE3Q6ZMZ3 975 aa11.1□□□□□ -0.63
SP140-214ENST00000544128 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.1□□□□□ -0.63
SP140-214ENST00000544128 CATIPQ7Z7H3 387 aa11.1□□□□□ -0.63
SP140-214ENST00000544128 SGMS1Q86VZ5 419 aa11.1□□□□□ -0.63
SP140-214ENST00000544128 SIAH1Q8IUQ4 282 aa11.1□□□□□ -0.63
SP140-214ENST00000544128 ZNF654Q8IZM8 581 aa11.1□□□□□ -0.63
SP140-214ENST00000544128 CHMP4CQ96CF2 233 aa11.1□□□□□ -0.63
SP140-214ENST00000544128 ZNF274Q96GC6 653 aaPredicted RBP11.1□□□□□ -0.63
SP140-214ENST00000544128 TMX3Q96JJ7 454 aa11.1□□□□□ -0.63
SP140-214ENST00000544128 ZSCAN31Q96LW9 406 aaPredicted RBP11.1□□□□□ -0.63
SP140-214ENST00000544128 MYL10Q9BUA6 226 aa11.1□□□□□ -0.63
SP140-214ENST00000544128 PICK1Q9NRD5 415 aa11.1□□□□□ -0.63
SP140-214ENST00000544128 NYAP2Q9P242 653 aa11.1□□□□□ -0.63
SP140-214ENST00000544128 MTMR7Q9Y216 660 aa11.1□□□□□ -0.63
SP140-214ENST00000544128 SLC12A7Q9Y666 1083 aa11.1□□□□□ -0.63
SP140-214ENST00000544128 DOCK1Q14185 1865 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 TRPM7Q96QT4 1865 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 GOLGA8BA8MQT2 603 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 USP17L5A8MUK1 530 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 ZBTB43O43298 467 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 PDIA3P30101 505 aaKnown RBP11.09□□□□□ -0.63
SP140-214ENST00000544128 ECE1P42892 770 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 NOVP48745 357 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 EVCP57679 992 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 CCT2P78371 535 aaKnown RBP11.09□□□□□ -0.63
SP140-214ENST00000544128 VGLL4Q14135 290 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 MAP3K11Q16584 847 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 ME3Q16798 604 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 NOL9Q5SY16 702 aaKnown RBP11.09□□□□□ -0.63
SP140-214ENST00000544128 APOA5Q6Q788 366 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 LRRC47Q8N1G4 583 aaKnown RBP11.09□□□□□ -0.63
SP140-214ENST00000544128 C2orf69Q8N8R5 385 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 NECAB1Q8N987 351 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 PNMA1Q8ND90 353 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 ACER1Q8TDN7 264 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 NUP133Q8WUM0 1156 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 SLKQ9H2G2 1235 aaPredicted RBP11.09□□□□□ -0.63
SP140-214ENST00000544128 GBA2Q9HCG7 927 aaPredicted RBP11.09□□□□□ -0.63
SP140-214ENST00000544128 CSADQ9Y600 493 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 MYH4Q9Y623 1939 aa11.09□□□□□ -0.63
SP140-214ENST00000544128 A0A1W2PRG0 241 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 GOLGA8AA7E2F4 631 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 RAD21O60216 631 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 PFKFB2O60825 505 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 PTPRAP18433 802 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 RXRAP19793 462 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 SLC4A3P48751 1232 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 MICU3Q86XE3 530 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 CCDC144CPQ8IYA2 1237 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 ANKRD13AQ8IZ07 590 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 MKL1Q969V6 931 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 CLMNQ96JQ2 1002 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 ELP3Q9H9T3 547 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 ARHGEF10LQ9HCE6 1279 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 SH2B1Q9NRF2 756 aaPredicted RBP11.08□□□□□ -0.64
SP140-214ENST00000544128 HPS5Q9UPZ3 1129 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 SNCAIPQ9Y6H5 919 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 OTOFQ9HC10 1997 aa11.08□□□□□ -0.64
SP140-214ENST00000544128 DDAH1O94760 285 aa11.07□□□□□ -0.64
SP140-214ENST00000544128 CALM1P0DP23 149 aa11.07□□□□□ -0.64
SP140-214ENST00000544128 CALM2P0DP24 149 aa11.07□□□□□ -0.64
SP140-214ENST00000544128 CALM3P0DP25 149 aa11.07□□□□□ -0.64
SP140-214ENST00000544128 METAP2P50579 478 aaKnown RBP eCLIP11.07□□□□□ -0.64
SP140-214ENST00000544128 FKBP1BP68106 108 aa11.07□□□□□ -0.64
SP140-214ENST00000544128 TROAPQ12815 778 aa11.07□□□□□ -0.64
SP140-214ENST00000544128 ZYXQ15942 572 aaKnown RBP11.07□□□□□ -0.64
SP140-214ENST00000544128 LDLRAD1Q5T700 205 aa11.07□□□□□ -0.64
SP140-214ENST00000544128 CST9Q5W186 159 aa11.07□□□□□ -0.64
SP140-214ENST00000544128 CCDC83Q8IWF9 413 aa11.07□□□□□ -0.64
SP140-214ENST00000544128 AS3MTQ9HBK9 375 aa11.07□□□□□ -0.64
SP140-214ENST00000544128 NCOA5Q9HCD5 579 aaKnown RBP11.07□□□□□ -0.64
SP140-214ENST00000544128 ZHX2Q9Y6X8 837 aa11.07□□□□□ -0.64
SP140-214ENST00000544128 PAPPA2Q9BXP8 1791 aa11.07□□□□□ -0.64
SP140-214ENST00000544128 MAP2K2P36507 400 aa11.06□□□□□ -0.64
SP140-214ENST00000544128 SCRN1Q12765 414 aa11.06□□□□□ -0.64
SP140-214ENST00000544128 SPP2Q13103 211 aa11.06□□□□□ -0.64
SP140-214ENST00000544128 RTN1Q16799 776 aa11.06□□□□□ -0.64
SP140-214ENST00000544128 SLFN13Q68D06 897 aa11.06□□□□□ -0.64
SP140-214ENST00000544128 RASGRP2Q7LDG7 609 aa11.06□□□□□ -0.64
SP140-214ENST00000544128 FANCBQ8NB91 859 aa11.06□□□□□ -0.64
SP140-214ENST00000544128 GTF3C6Q969F1 213 aa11.06□□□□□ -0.64
SP140-214ENST00000544128 SLC10A4Q96EP9 437 aa11.06□□□□□ -0.64
SP140-214ENST00000544128 FEZ1Q99689 392 aa11.06□□□□□ -0.64
SP140-214ENST00000544128 ARID3AQ99856 593 aa11.06□□□□□ -0.64
SP140-214ENST00000544128 WDR18Q9BV38 432 aa11.06□□□□□ -0.64
SP140-214ENST00000544128 SH2D4AQ9H788 454 aa11.06□□□□□ -0.64
SP140-214ENST00000544128 TMX2Q9Y320 296 aa11.06□□□□□ -0.64
SP140-214ENST00000544128 TRIM75PA6NK02 468 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 USP17L10C9JJH3 530 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 F5H6K3 240 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 CA12O43570 354 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 DTNBO60941 627 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 HSP90AA1P07900 732 aaKnown RBP11.05□□□□□ -0.64
SP140-214ENST00000544128 GOLGA8HP0CJ92 632 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 CDC27P30260 824 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 ADD1P35611 737 aaKnown RBP11.05□□□□□ -0.64
SP140-214ENST00000544128 RCAN1P53805 252 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 KLRC3Q07444 240 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 ST3GAL1Q11201 340 aa11.05□□□□□ -0.64
SP140-214ENST00000544128 CUL4AQ13619 759 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms