RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 C4orf50Q6ZRC1 276 aa16.99■□□□□ 0.31
CHD4-210ENST00000544040 ZNF408Q9H9D4 720 aa16.99■□□□□ 0.31
CHD4-210ENST00000544040 HOMER3Q9NSC5 361 aa16.99■□□□□ 0.31
CHD4-210ENST00000544040 AZI2Q9H6S1 392 aa16.99■□□□□ 0.31
CHD4-210ENST00000544040 PLCH2O75038 1416 aa16.99■□□□□ 0.31
CHD4-210ENST00000544040 SBNO1A3KN83 1393 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 PFDN1O60925 122 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 STAM2O75886 525 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 SEC31AO94979 1220 aaKnown RBP16.98■□□□□ 0.31
CHD4-210ENST00000544040 IFRD2Q12894 506 aaPredicted RBP16.98■□□□□ 0.31
CHD4-210ENST00000544040 APPBP2Q92624 585 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 Q9H521 79 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 PPFIA2O75334 1257 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 SLC1A4P43007 532 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 RCN2Q14257 317 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 LRCH2Q5VUJ6 765 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 EYA2O00167 538 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 ZNF827Q17R98 1081 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 ADGRL1O94910 1474 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 PFKFB1P16118 471 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 SMYD2Q9NRG4 433 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 ZNF215Q9UL58 517 aaPredicted RBP16.98■□□□□ 0.31
CHD4-210ENST00000544040 IL2RBP14784 551 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 KMT5BQ4FZB7 885 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 TRIM50Q86XT4 487 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 CERS3Q8IU89 383 aa16.98■□□□□ 0.31
CHD4-210ENST00000544040 ABL1P00519 1130 aa16.97■□□□□ 0.31
CHD4-210ENST00000544040 YARSP54577 528 aaKnown RBP16.97■□□□□ 0.31
CHD4-210ENST00000544040 NSMFQ6X4W1 530 aa16.97■□□□□ 0.31
CHD4-210ENST00000544040 CCDC84Q86UT8 332 aaPredicted RBP16.97■□□□□ 0.31
CHD4-210ENST00000544040 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.97■□□□□ 0.31
CHD4-210ENST00000544040 PDCD7Q8N8D1 485 aaKnown RBP16.97■□□□□ 0.31
CHD4-210ENST00000544040 FAN1Q9Y2M0 1017 aa16.97■□□□□ 0.31
CHD4-210ENST00000544040 STAT1P42224 750 aa16.97■□□□□ 0.31
CHD4-210ENST00000544040 IFNAR2P48551 515 aa16.97■□□□□ 0.31
CHD4-210ENST00000544040 PHEXP78562 749 aa16.97■□□□□ 0.31
CHD4-210ENST00000544040 KIF22Q14807 665 aa16.97■□□□□ 0.31
CHD4-210ENST00000544040 E2F5Q15329 346 aa16.97■□□□□ 0.31
CHD4-210ENST00000544040 GPBP1Q86WP2 473 aa16.97■□□□□ 0.31
CHD4-210ENST00000544040 RNMTO43148 476 aaKnown RBP16.97■□□□□ 0.31
CHD4-210ENST00000544040 TECP42680 631 aa16.97■□□□□ 0.31
CHD4-210ENST00000544040 MAPKAPK5Q8IW41 473 aa16.97■□□□□ 0.31
CHD4-210ENST00000544040 LRGUKQ96M69 825 aa16.97■□□□□ 0.31
CHD4-210ENST00000544040 GRK7Q8WTQ7 553 aa16.97■□□□□ 0.31
CHD4-210ENST00000544040 MYCBPQ99417 103 aaPredicted RBP16.97■□□□□ 0.31
CHD4-210ENST00000544040 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.96■□□□□ 0.31
CHD4-210ENST00000544040 SLC8A1P32418 973 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 AP1ARQ63HQ0 302 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 BANK1Q8NDB2 785 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 HDAC11Q96DB2 347 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 CD109Q6YHK3 1445 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 SYNJ2BP-COX16A0A087WUM0 186 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 POC1B-GALNT4F8VUJ3 575 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 SGSM2O43147 1006 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 POLR2FP61218 127 aaKnown RBP16.96■□□□□ 0.31
CHD4-210ENST00000544040 CCDC24Q8N4L8 307 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 LRRC8CQ8TDW0 803 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 TRIM56Q9BRZ2 755 aaKnown RBP16.96■□□□□ 0.31
CHD4-210ENST00000544040 COX16Q9P0S2 106 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 GNPATO15228 680 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 XRCC5P13010 732 aaKnown RBP16.96■□□□□ 0.31
CHD4-210ENST00000544040 ATF2P15336 505 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 OR8K1Q8NGG5 319 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 MAD1L1Q9Y6D9 718 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 GOLGA8FQ08AF8 430 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 GOLGA8DPQ0D2H9 430 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 ME3Q16798 604 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 TGFBRAP1Q8WUH2 860 aa16.96■□□□□ 0.31
CHD4-210ENST00000544040 KIF14Q15058 1648 aa16.96■□□□□ 0.3
CHD4-210ENST00000544040 TSTA3Q13630 321 aaPredicted RBP16.96■□□□□ 0.3
CHD4-210ENST00000544040 NUCKS1Q9H1E3 243 aaKnown RBP16.96■□□□□ 0.3
CHD4-210ENST00000544040 ANLNQ9NQW6 1124 aa16.96■□□□□ 0.3
CHD4-210ENST00000544040 ZNF532Q9HCE3 1301 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 ATXN8OSP0DMR3 200 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 GUCY2DQ02846 1103 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 IFT88Q13099 833 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 TMTC4Q5T4D3 741 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 ABTB1Q969K4 478 aaPredicted RBP16.95■□□□□ 0.3
CHD4-210ENST00000544040 STK24Q9Y6E0 443 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 RPRD2Q5VT52 1461 aaKnown RBP16.95■□□□□ 0.3
CHD4-210ENST00000544040 ESYT2A0FGR8 921 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 PPP1R12AO14974 1030 aaPredicted RBP16.95■□□□□ 0.3
CHD4-210ENST00000544040 DKC1O60832 514 aaKnown RBP eCLIP16.95■□□□□ 0.31e-323■■■□□ 16.6
CHD4-210ENST00000544040 PTPN21Q16825 1174 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 METTL13Q8N6R0 699 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 SDCCAG3Q96C92 435 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 LRRD1A4D1F6 860 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 E7EWF7 191 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 SPOUT1Q5T280 376 aaKnown RBP16.95■□□□□ 0.3
CHD4-210ENST00000544040 TTBK2Q6IQ55 1244 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 RPGRIP1Q96KN7 1286 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 MMS19Q96T76 1030 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 BAG5Q9UL15 447 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 ZMYND10O75800 440 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 APOEP02649 317 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 ZAP70P43403 619 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 DNM2P50570 870 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 LRRC8AQ8IWT6 810 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 NME8Q8N427 588 aa16.95■□□□□ 0.3
CHD4-210ENST00000544040 SKA2Q8WVK7 121 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms