RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 ZSCAN20P17040 1043 aaPredicted RBP18.32■□□□□ 0.52
SCNN1A-221ENST00000543768 CASP1P29466 404 aa18.32■□□□□ 0.52
SCNN1A-221ENST00000543768 DPYDQ12882 1025 aa18.32■□□□□ 0.52
SCNN1A-221ENST00000543768 PTPN21Q16825 1174 aa18.32■□□□□ 0.52
SCNN1A-221ENST00000543768 TYW1BQ6NUM6 668 aa18.32■□□□□ 0.52
SCNN1A-221ENST00000543768 CCDC34Q96HJ3 373 aa18.32■□□□□ 0.52
SCNN1A-221ENST00000543768 TMX1Q9H3N1 280 aa18.32■□□□□ 0.52
SCNN1A-221ENST00000543768 DDX60LQ5H9U9 1706 aaKnown RBP18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 PSDA5PKW4 1024 aaPredicted RBP18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 M0R2N6 131 aa18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 CYTH3O43739 400 aa18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 ERCC5P28715 1186 aaPredicted RBP18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 MCM7P33993 719 aa18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 E2F4Q16254 413 aa18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 ZNF592Q92610 1267 aa18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 TMEM47Q9BQJ4 181 aa18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 POLLQ9UGP5 575 aa18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 EP400Q96L91 3159 aa18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 BBOX1O75936 387 aa18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 GNAQP50148 359 aa18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 CERS3Q8IU89 383 aa18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 C4orf32Q8N8J7 132 aa18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 SAMSN1Q9NSI8 373 aaKnown RBP18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 PCDHA4Q9UN74 947 aa18.31■□□□□ 0.52
SCNN1A-221ENST00000543768 TOP1P11387 765 aaKnown RBP18.3■□□□□ 0.52
SCNN1A-221ENST00000543768 HOXA10P31260 410 aaPredicted RBP18.3■□□□□ 0.52
SCNN1A-221ENST00000543768 CT47A1Q5JQC4 288 aaPredicted RBP18.3■□□□□ 0.52
SCNN1A-221ENST00000543768 CCDC112Q8NEF3 446 aa18.3■□□□□ 0.52
SCNN1A-221ENST00000543768 PPP1R13BQ96KQ4 1090 aa18.3■□□□□ 0.52
SCNN1A-221ENST00000543768 SNED1Q8TER0 1413 aa18.3■□□□□ 0.52
SCNN1A-221ENST00000543768 PALM3A6NDB9 673 aaPredicted RBP18.3■□□□□ 0.52
SCNN1A-221ENST00000543768 CD44P16070 742 aaKnown RBP18.3■□□□□ 0.52
SCNN1A-221ENST00000543768 DDR1Q08345 913 aa18.3■□□□□ 0.52
SCNN1A-221ENST00000543768 C16orf86Q6ZW13 317 aa18.3■□□□□ 0.52
SCNN1A-221ENST00000543768 TBC1D16Q8TBP0 767 aa18.3■□□□□ 0.52
SCNN1A-221ENST00000543768 FAM163AQ96GL9 167 aaPredicted RBP18.3■□□□□ 0.52
SCNN1A-221ENST00000543768 GSDMAQ96QA5 445 aa18.3■□□□□ 0.52
SCNN1A-221ENST00000543768 TRPC5Q9UL62 973 aaPredicted RBP18.3■□□□□ 0.52
SCNN1A-221ENST00000543768 MYH1P12882 1939 aa18.29■□□□□ 0.52
SCNN1A-221ENST00000543768 NRDCO43847 1150 aa18.29■□□□□ 0.52
SCNN1A-221ENST00000543768 CDK11BP21127 795 aaKnown RBP18.29■□□□□ 0.52
SCNN1A-221ENST00000543768 CDK8P49336 464 aa18.29■□□□□ 0.52
SCNN1A-221ENST00000543768 RHBDL3P58872 404 aa18.29■□□□□ 0.52
SCNN1A-221ENST00000543768 TBX2Q13207 712 aaPredicted RBP18.29■□□□□ 0.52
SCNN1A-221ENST00000543768 CUL4BQ13620 913 aa18.29■□□□□ 0.52
SCNN1A-221ENST00000543768 TEX11Q8IYF3 940 aa18.29■□□□□ 0.52
SCNN1A-221ENST00000543768 STX8Q9UNK0 236 aa18.29■□□□□ 0.52
SCNN1A-221ENST00000543768 MFSD14BQ5SR56 506 aa18.28■□□□□ 0.52
SCNN1A-221ENST00000543768 ARL6IP4Q66PJ3 421 aaKnown RBP18.28■□□□□ 0.52
SCNN1A-221ENST00000543768 WWC2Q6AWC2 1192 aa18.28■□□□□ 0.52
SCNN1A-221ENST00000543768 RASGRP4Q8TDF6 673 aa18.28■□□□□ 0.52
SCNN1A-221ENST00000543768 ANKRD7Q92527 254 aa18.28■□□□□ 0.52
SCNN1A-221ENST00000543768 FLT1P17948 1338 aa18.28■□□□□ 0.52
SCNN1A-221ENST00000543768 LTBP1Q14766 1721 aa18.28■□□□□ 0.52
SCNN1A-221ENST00000543768 GOLGA8FQ08AF8 430 aa18.28■□□□□ 0.52
SCNN1A-221ENST00000543768 GOLGA8DPQ0D2H9 430 aa18.28■□□□□ 0.52
SCNN1A-221ENST00000543768 SLC27A3Q5K4L6 730 aa18.28■□□□□ 0.52
SCNN1A-221ENST00000543768 PDXDC2PQ6P474 469 aa18.28■□□□□ 0.52
SCNN1A-221ENST00000543768 IQUBQ8NA54 791 aa18.28■□□□□ 0.52
SCNN1A-221ENST00000543768 STAMQ92783 540 aa18.28■□□□□ 0.52
SCNN1A-221ENST00000543768 KLRG2A4D1S0 409 aaPredicted RBP18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 POLRMTO00411 1230 aaKnown RBP18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 CRAMP1Q96RY5 1269 aa18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 EYA3Q99504 573 aa18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 MTRQ99707 1265 aa18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 ZNF287Q9HBT7 754 aa18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 MTMR7Q9Y216 660 aa18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 GAKO14976 1311 aa18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 PPP1R3GB7ZBB8 358 aa18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 KIF2AO00139 706 aaPredicted RBP18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 STXBP3O00186 592 aa18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 PLCG2P16885 1265 aa18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 TMEM139Q8IV31 216 aa18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 DAGLBQ8NCG7 672 aa18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 NEDD1Q8NHV4 660 aa18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 BARHL2Q9NY43 387 aa18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 PCDHA6Q9UN73 950 aa18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 PCDHA8Q9Y5H6 950 aa18.27■□□□□ 0.52
SCNN1A-221ENST00000543768 LRRC37AA6NMS7 1700 aa18.26■□□□□ 0.51
SCNN1A-221ENST00000543768 NR1I3Q14994 352 aa18.26■□□□□ 0.51
SCNN1A-221ENST00000543768 SYCP1Q15431 976 aa18.26■□□□□ 0.51
SCNN1A-221ENST00000543768 SPATA1Q5VX52 437 aa18.26■□□□□ 0.51
SCNN1A-221ENST00000543768 RASGRP2Q7LDG7 609 aa18.26■□□□□ 0.51
SCNN1A-221ENST00000543768 APTXQ7Z2E3 356 aaKnown RBP18.26■□□□□ 0.51
SCNN1A-221ENST00000543768 KIF18AQ8NI77 898 aa18.26■□□□□ 0.51
SCNN1A-221ENST00000543768 GTPBP4Q9BZE4 634 aaKnown RBP18.26■□□□□ 0.51
SCNN1A-221ENST00000543768 FOCADQ5VW36 1801 aa18.26■□□□□ 0.51
SCNN1A-221ENST00000543768 GOLGA8HP0CJ92 632 aa18.26■□□□□ 0.51
SCNN1A-221ENST00000543768 LONP1P36776 959 aaKnown RBP18.26■□□□□ 0.51
SCNN1A-221ENST00000543768 NCBP1Q09161 790 aaKnown RBP18.26■□□□□ 0.51
SCNN1A-221ENST00000543768 SMYD4Q8IYR2 804 aaPredicted RBP18.26■□□□□ 0.51
SCNN1A-221ENST00000543768 TBC1D22AQ8WUA7 517 aa18.26■□□□□ 0.51
SCNN1A-221ENST00000543768 A0A1B0GTH6 734 aa18.25■□□□□ 0.51
SCNN1A-221ENST00000543768 KLRF2D3W0D1 207 aa18.25■□□□□ 0.51
SCNN1A-221ENST00000543768 SPECC1LQ69YQ0 1117 aa18.25■□□□□ 0.51
SCNN1A-221ENST00000543768 GALNT17Q6IS24 598 aa18.25■□□□□ 0.51
SCNN1A-221ENST00000543768 KLHL10Q6JEL2 608 aa18.25■□□□□ 0.51
SCNN1A-221ENST00000543768 HEATR3Q7Z4Q2 680 aa18.25■□□□□ 0.51
SCNN1A-221ENST00000543768 CCDC148Q8NFR7 591 aa18.25■□□□□ 0.51
SCNN1A-221ENST00000543768 LZTS2Q9BRK4 669 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms