RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 RABGGTAQ92696 567 aa18.8■□□□□ 0.6
KDM2B-216ENST00000543025 GOLGA1Q92805 767 aa18.8■□□□□ 0.6
KDM2B-216ENST00000543025 TNFRSF25Q93038 417 aa18.8■□□□□ 0.6
KDM2B-216ENST00000543025 ADGRG1Q9Y653 693 aa18.8■□□□□ 0.6
KDM2B-216ENST00000543025 WNT7AO00755 349 aa18.8■□□□□ 0.6
KDM2B-216ENST00000543025 SEC31AO94979 1220 aaKnown RBP18.8■□□□□ 0.6
KDM2B-216ENST00000543025 GYG1P46976 350 aa18.8■□□□□ 0.6
KDM2B-216ENST00000543025 ATP2C1P98194 919 aaPredicted RBP18.8■□□□□ 0.6
KDM2B-216ENST00000543025 ZNF174Q15697 407 aa18.8■□□□□ 0.6
KDM2B-216ENST00000543025 SLC15A2Q16348 729 aa18.8■□□□□ 0.6
KDM2B-216ENST00000543025 TBC1D9BQ66K14 1250 aa18.8■□□□□ 0.6
KDM2B-216ENST00000543025 CC2D1AQ6P1N0 951 aaPredicted RBP18.8■□□□□ 0.6
KDM2B-216ENST00000543025 SMYD4Q8IYR2 804 aaPredicted RBP18.8■□□□□ 0.6
KDM2B-216ENST00000543025 EPC1Q9H2F5 836 aa18.8■□□□□ 0.6
KDM2B-216ENST00000543025 STK32BQ9NY57 414 aa18.8■□□□□ 0.6
KDM2B-216ENST00000543025 MYH2Q9UKX2 1941 aa18.8■□□□□ 0.6
KDM2B-216ENST00000543025 CACNA1SQ13698 1873 aa18.8■□□□□ 0.6
KDM2B-216ENST00000543025 CCDC66A2RUB6 948 aa18.79■□□□□ 0.6
KDM2B-216ENST00000543025 MFAP3LO75121 409 aa18.79■□□□□ 0.6
KDM2B-216ENST00000543025 FGRP09769 529 aa18.79■□□□□ 0.6
KDM2B-216ENST00000543025 RAD9BQ6WBX8 426 aa18.79■□□□□ 0.6
KDM2B-216ENST00000543025 TMTC3Q6ZXV5 915 aa18.79■□□□□ 0.6
KDM2B-216ENST00000543025 COL23A1Q86Y22 540 aaPredicted RBP18.79■□□□□ 0.6
KDM2B-216ENST00000543025 CNGA4Q8IV77 575 aa18.79■□□□□ 0.6
KDM2B-216ENST00000543025 ITIH6Q6UXX5 1313 aa18.79■□□□□ 0.6
KDM2B-216ENST00000543025 PTGDRQ13258 359 aa18.79■□□□□ 0.6
KDM2B-216ENST00000543025 NPY5RQ15761 445 aa18.79■□□□□ 0.6
KDM2B-216ENST00000543025 ILDR2Q71H61 639 aa18.79■□□□□ 0.6
KDM2B-216ENST00000543025 CPLX3Q8WVH0 158 aa18.79■□□□□ 0.6
KDM2B-216ENST00000543025 LZTFL1Q9NQ48 299 aa18.79■□□□□ 0.6
KDM2B-216ENST00000543025 COL1A1P02452 1464 aaPredicted RBP18.79■□□□□ 0.6
KDM2B-216ENST00000543025 DLEC1Q9Y238 1755 aa18.78■□□□□ 0.6
KDM2B-216ENST00000543025 CYP2D7A0A087X1C5 515 aa18.78■□□□□ 0.6
KDM2B-216ENST00000543025 DYNLL1P63167 89 aaKnown RBP18.78■□□□□ 0.6
KDM2B-216ENST00000543025 CCDC51Q96ER9 411 aa18.78■□□□□ 0.6
KDM2B-216ENST00000543025 PYM1Q9BRP8 204 aaKnown RBP18.78■□□□□ 0.6
KDM2B-216ENST00000543025 IRX2Q9BZI1 471 aaPredicted RBP18.78■□□□□ 0.6
KDM2B-216ENST00000543025 CNTNAP5Q8WYK1 1306 aa18.78■□□□□ 0.6
KDM2B-216ENST00000543025 KIF5CO60282 957 aa18.78■□□□□ 0.6
KDM2B-216ENST00000543025 TBC1D8O95759 1140 aa18.78■□□□□ 0.6
KDM2B-216ENST00000543025 GYS1P13807 737 aa18.78■□□□□ 0.6
KDM2B-216ENST00000543025 CASP14P31944 242 aa18.78■□□□□ 0.6
KDM2B-216ENST00000543025 UBE4AQ14139 1066 aa18.78■□□□□ 0.6
KDM2B-216ENST00000543025 CAVIN4Q5BKX8 364 aa18.78■□□□□ 0.6
KDM2B-216ENST00000543025 RASGRP2Q7LDG7 609 aa18.78■□□□□ 0.6
KDM2B-216ENST00000543025 IQUBQ8NA54 791 aa18.78■□□□□ 0.6
KDM2B-216ENST00000543025 JAKMIP3Q5VZ66 844 aa18.77■□□□□ 0.6
KDM2B-216ENST00000543025 BICDL1Q6ZP65 573 aa18.77■□□□□ 0.6
KDM2B-216ENST00000543025 FLAD1Q8NFF5 587 aa18.77■□□□□ 0.6
KDM2B-216ENST00000543025 CTCFLQ8NI51 663 aaPredicted RBP18.77■□□□□ 0.6
KDM2B-216ENST00000543025 PARD6BQ9BYG5 372 aa18.77■□□□□ 0.6
KDM2B-216ENST00000543025 ARFGAP3Q9NP61 516 aa18.77■□□□□ 0.6
KDM2B-216ENST00000543025 CTNND2Q9UQB3 1225 aa18.77■□□□□ 0.6
KDM2B-216ENST00000543025 XDHP47989 1333 aa18.77■□□□□ 0.6
KDM2B-216ENST00000543025 BAZ2AQ9UIF9 1905 aaKnown RBP18.77■□□□□ 0.6
KDM2B-216ENST00000543025 GYPCP04921 128 aa18.77■□□□□ 0.6
KDM2B-216ENST00000543025 TRAPPC10P48553 1259 aa18.77■□□□□ 0.6
KDM2B-216ENST00000543025 E2F4Q16254 413 aa18.77■□□□□ 0.6
KDM2B-216ENST00000543025 NOM1Q5C9Z4 860 aaKnown RBP18.77■□□□□ 0.6
KDM2B-216ENST00000543025 CTR9Q6PD62 1173 aa18.77■□□□□ 0.6
KDM2B-216ENST00000543025 ANKRD18AQ8IVF6 992 aa18.77■□□□□ 0.6
KDM2B-216ENST00000543025 COL4A1P02462 1669 aa18.76■□□□□ 0.59
KDM2B-216ENST00000543025 TXLNAP40222 546 aa18.76■□□□□ 0.59
KDM2B-216ENST00000543025 SASH3O75995 380 aa18.76■□□□□ 0.59
KDM2B-216ENST00000543025 FECHP22830 423 aa18.76■□□□□ 0.59
KDM2B-216ENST00000543025 STAMQ92783 540 aa18.76■□□□□ 0.59
KDM2B-216ENST00000543025 UBXN6Q9BZV1 441 aa18.76■□□□□ 0.59
KDM2B-216ENST00000543025 SRGAP1Q7Z6B7 1085 aa18.75■□□□□ 0.59
KDM2B-216ENST00000543025 SRBD1Q8N5C6 995 aaKnown RBP18.75■□□□□ 0.59
KDM2B-216ENST00000543025 LIMA1Q9UHB6 759 aaKnown RBP18.75■□□□□ 0.59
KDM2B-216ENST00000543025 RWDD2AQ9UIY3 292 aa18.75■□□□□ 0.59
KDM2B-216ENST00000543025 USP17L12C9JPN9 530 aa18.75■□□□□ 0.59
KDM2B-216ENST00000543025 USP17L21D6R901 530 aa18.75■□□□□ 0.59
KDM2B-216ENST00000543025 CYP2C19P33261 490 aa18.75■□□□□ 0.59
KDM2B-216ENST00000543025 CCT6AP40227 531 aaKnown RBP18.75■□□□□ 0.59
KDM2B-216ENST00000543025 FXR1P51114 621 aaKnown RBP eCLIP18.75■□□□□ 0.59
KDM2B-216ENST00000543025 CHMP4BP1P59074 171 aa18.75■□□□□ 0.59
KDM2B-216ENST00000543025 SPAG1Q07617 926 aa18.75■□□□□ 0.59
KDM2B-216ENST00000543025 RRAGBQ5VZM2 374 aa18.75■□□□□ 0.59
KDM2B-216ENST00000543025 PIK3AP1Q6ZUJ8 805 aa18.75■□□□□ 0.59
KDM2B-216ENST00000543025 CEP112Q8N8E3 955 aa18.75■□□□□ 0.59
KDM2B-216ENST00000543025 BLZF1Q9H2G9 400 aa18.75■□□□□ 0.59
KDM2B-216ENST00000543025 TTF2Q9UNY4 1162 aaKnown RBP18.75■□□□□ 0.59
KDM2B-216ENST00000543025 CASZ1Q86V15 1759 aa18.75■□□□□ 0.59
KDM2B-216ENST00000543025 LRRC10BA6NIK2 292 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 SCG2P13521 617 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 NLRP5P59047 1200 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 TUBB2AQ13885 445 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 KRT31Q15323 416 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 PDXDC2PQ6P474 469 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 SETDB2Q96T68 719 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 TUBB2BQ9BVA1 445 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 BSDC1Q9NW68 430 aaPredicted RBP18.74■□□□□ 0.59
KDM2B-216ENST00000543025 CDC23Q9UJX2 597 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.74■□□□□ 0.59
KDM2B-216ENST00000543025 A0A1B0GUL6 1792 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 CCDC151A5D8V7 595 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 ERICH4A6NGS2 130 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 N4BP3O15049 544 aa18.74■□□□□ 0.59
KDM2B-216ENST00000543025 GTPBP6O43824 516 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms