RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 FMNL1O95466 1100 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-208ENST00000542570 BMP15O95972 392 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 GOLGA8FQ08AF8 430 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 GOLGA8DPQ0D2H9 430 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 LRMPQ12912 555 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 FKBP15Q5T1M5 1219 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 SAMD7Q7Z3H4 446 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 STAG1Q8WVM7 1258 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 MROH7-TTC4A0A0A0MT08 1334 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 PSMA7O14818 248 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 POSTNQ15063 836 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 HERC4Q5GLZ8 1057 aaPredicted RBP11.45□□□□□ -0.58
TOP3A-208ENST00000542570 TBCKQ8TEA7 893 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 TSG101Q99816 390 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 PCDHAC2Q9Y5I4 1007 aa11.45□□□□□ -0.58
TOP3A-208ENST00000542570 YEATS4O95619 227 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 SYCP1Q15431 976 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 DPCR1Q3MIW9 517 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 LONRF3Q496Y0 759 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 BICD1Q96G01 975 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 TMEM260Q9NX78 707 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 KIAA1468Q9P260 1216 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 TRAF5O00463 557 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 MEIS1O00470 390 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 CABP7Q86V35 215 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 FBXO11Q86XK2 927 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 RRAGDQ9NQL2 400 aaPredicted RBP11.44□□□□□ -0.58
TOP3A-208ENST00000542570 NRBP1Q9UHY1 535 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 PP2D1A8MPX8 630 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 USP17L10C9JJH3 530 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 MMP1P03956 469 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 CEP135Q66GS9 1140 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 SULF1Q8IWU6 871 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 ERMNQ8TAM6 284 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 IGDCC4Q8TDY8 1250 aa11.44□□□□□ -0.58
TOP3A-208ENST00000542570 EEF2P13639 858 aaKnown RBP11.43□□□□□ -0.58
TOP3A-208ENST00000542570 FGFR2P21802 821 aa11.43□□□□□ -0.58
TOP3A-208ENST00000542570 SSR1P43307 286 aaKnown RBP11.43□□□□□ -0.58
TOP3A-208ENST00000542570 ZNF445P59923 1031 aa11.43□□□□□ -0.58
TOP3A-208ENST00000542570 SLC39A14Q15043 492 aa11.43□□□□□ -0.58
TOP3A-208ENST00000542570 GADL1Q6ZQY3 521 aa11.43□□□□□ -0.58
TOP3A-208ENST00000542570 SRBD1Q8N5C6 995 aaKnown RBP11.43□□□□□ -0.58
TOP3A-208ENST00000542570 GJA10Q969M2 543 aa11.43□□□□□ -0.58
TOP3A-208ENST00000542570 PEAK1Q9H792 1746 aa11.43□□□□□ -0.58
TOP3A-208ENST00000542570 CTDNEP1O95476 244 aa11.43□□□□□ -0.58
TOP3A-208ENST00000542570 MYL5Q02045 173 aa11.43□□□□□ -0.58
TOP3A-208ENST00000542570 UBXN1Q04323 297 aa11.43□□□□□ -0.58
TOP3A-208ENST00000542570 C12orf60Q5U649 245 aa11.43□□□□□ -0.58
TOP3A-208ENST00000542570 SV2BQ7L1I2 683 aa11.43□□□□□ -0.58
TOP3A-208ENST00000542570 RNF26Q9BY78 433 aaPredicted RBP11.43□□□□□ -0.58
TOP3A-208ENST00000542570 TAB2Q9NYJ8 693 aa11.43□□□□□ -0.58
TOP3A-208ENST00000542570 TMOD4Q9NZQ9 345 aa11.43□□□□□ -0.58
TOP3A-208ENST00000542570 PCDHA12Q9UN75 941 aa11.43□□□□□ -0.58
TOP3A-208ENST00000542570 C11orf57Q6ZUT1 292 aaPredicted RBP11.43□□□□□ -0.58
TOP3A-208ENST00000542570 ZNF341Q9BYN7 854 aa11.43□□□□□ -0.58
TOP3A-208ENST00000542570 LZTFL1Q9NQ48 299 aa11.43□□□□□ -0.58
TOP3A-208ENST00000542570 SRGNP10124 158 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 DCAF17Q5H9S7 520 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-208ENST00000542570 CDC42EP5Q6NZY7 148 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 POTEAQ6S8J7 498 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 KRT25Q7Z3Z0 450 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 EHMT1Q9H9B1 1298 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 SLC39A2Q9NP94 309 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 FANCLQ9NW38 375 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 FZD1Q9UP38 647 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 FOXN1O15353 648 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 FDPSP14324 419 aaKnown RBP11.42□□□□□ -0.58
TOP3A-208ENST00000542570 KIF4BQ2VIQ3 1234 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 ODF2Q5BJF6 829 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 DPY19L2Q6NUT2 758 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 KANSL2Q9H9L4 492 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 LRRC41Q15345 812 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 USP49Q70CQ1 688 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 NEK8Q86SG6 692 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 TDRD7Q8NHU6 1098 aaKnown RBP11.42□□□□□ -0.58
TOP3A-208ENST00000542570 TMEM39BQ9GZU3 492 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 RCOR1Q9UKL0 485 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 CCPG1Q9ULG6 757 aa11.42□□□□□ -0.58
TOP3A-208ENST00000542570 DDAH1O94760 285 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 FAM13AO94988 1023 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 GNG11P61952 73 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 SPP2Q13103 211 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 NOLC1Q14978 699 aaKnown RBP eCLIP11.41□□□□□ -0.58
TOP3A-208ENST00000542570 RTKN2Q8IZC4 609 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 SMCR8Q8TEV9 937 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-208ENST00000542570 PRMT6Q96LA8 375 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-208ENST00000542570 SH2D3AQ9BRG2 576 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 CCDC169A6NNP5 214 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 PSMD14O00487 310 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 MYCP01106 439 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-208ENST00000542570 TAL1P17542 331 aaPredicted RBP11.41□□□□□ -0.58
TOP3A-208ENST00000542570 FANCCQ00597 558 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 PPP2R5BQ15173 497 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 UVSSAQ2YD98 709 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 WWC2Q6AWC2 1192 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 TMTC3Q6ZXV5 915 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 CRAMP1Q96RY5 1269 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 XPO4Q9C0E2 1151 aaKnown RBP11.41□□□□□ -0.58
TOP3A-208ENST00000542570 RNF181Q9P0P0 153 aa11.41□□□□□ -0.58
TOP3A-208ENST00000542570 PUF60Q9UHX1 559 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms