RNA–Protein interactions for RNA: ENST00000542502.5

MDM2-228, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-228ENST00000542502 NR0B2Q15466 257 aa6.86□□□□□ -1.31
MDM2-228ENST00000542502 SLFN12Q8IYM2 578 aa6.86□□□□□ -1.31
MDM2-228ENST00000542502 DHX38Q92620 1227 aaKnown RBP6.86□□□□□ -1.31
MDM2-228ENST00000542502 SLC6A17Q9H1V8 727 aa6.86□□□□□ -1.31
MDM2-228ENST00000542502 PCDHA11Q9Y5I1 949 aa6.86□□□□□ -1.31
MDM2-228ENST00000542502 ERCC6L2Q5T890 1561 aa6.86□□□□□ -1.31
MDM2-228ENST00000542502 ANKRD33BA6NCL7 494 aa6.85□□□□□ -1.31
MDM2-228ENST00000542502 PATL2C9JE40 543 aaKnown RBP6.85□□□□□ -1.31
MDM2-228ENST00000542502 NUAK1O60285 661 aa6.85□□□□□ -1.31
MDM2-228ENST00000542502 CILPO75339 1184 aa6.85□□□□□ -1.31
MDM2-228ENST00000542502 BPNT1O95861 308 aa6.85□□□□□ -1.31
MDM2-228ENST00000542502 TIGD5Q53EQ6 642 aa6.85□□□□□ -1.31
MDM2-228ENST00000542502 BNC2Q6ZN30 1099 aaPredicted RBP6.85□□□□□ -1.31
MDM2-228ENST00000542502 SYTL4Q96C24 671 aaPredicted RBP6.85□□□□□ -1.31
MDM2-228ENST00000542502 KRTAP4-11Q9BYQ6 195 aa6.85□□□□□ -1.31
MDM2-228ENST00000542502 CWC22Q9HCG8 908 aaKnown RBP6.85□□□□□ -1.31
MDM2-228ENST00000542502 PARP2Q9UGN5 583 aa6.85□□□□□ -1.31
MDM2-228ENST00000542502 ABCC2Q92887 1545 aa6.85□□□□□ -1.31
MDM2-228ENST00000542502 NCANO14594 1321 aa6.84□□□□□ -1.31
MDM2-228ENST00000542502 PRR36Q9H6K5 1346 aa6.84□□□□□ -1.31
MDM2-228ENST00000542502 FAM221AA4D161 298 aa6.84□□□□□ -1.31
MDM2-228ENST00000542502 LRRN2O75325 713 aa6.84□□□□□ -1.31
MDM2-228ENST00000542502 DAB2P98082 770 aa6.84□□□□□ -1.31
MDM2-228ENST00000542502 SPPL2CQ8IUH8 684 aa6.84□□□□□ -1.31
MDM2-228ENST00000542502 GATAD2BQ8WXI9 593 aa6.84□□□□□ -1.31
MDM2-228ENST00000542502 CDK11AQ9UQ88 783 aaPredicted RBP6.84□□□□□ -1.31
MDM2-228ENST00000542502 YBX2Q9Y2T7 364 aaKnown RBP6.84□□□□□ -1.31
MDM2-228ENST00000542502 ARHGAP35Q9NRY4 1499 aa6.84□□□□□ -1.31
MDM2-228ENST00000542502 CEP162Q5TB80 1403 aa6.84□□□□□ -1.32
MDM2-228ENST00000542502 RBM47A0AV96 593 aaKnown RBP6.83□□□□□ -1.32
MDM2-228ENST00000542502 PRRG2O14669 202 aa6.83□□□□□ -1.32
MDM2-228ENST00000542502 PEX10O60683 326 aa6.83□□□□□ -1.32
MDM2-228ENST00000542502 INHBBP09529 407 aa6.83□□□□□ -1.32
MDM2-228ENST00000542502 TNNI2P48788 182 aa6.83□□□□□ -1.32
MDM2-228ENST00000542502 LMNB2Q03252 620 aa6.83□□□□□ -1.32
MDM2-228ENST00000542502 CHRNEQ04844 493 aa6.83□□□□□ -1.32
MDM2-228ENST00000542502 PSMD2Q13200 908 aa6.83□□□□□ -1.32
MDM2-228ENST00000542502 CAMK2GQ13555 558 aaPredicted RBP6.83□□□□□ -1.32
MDM2-228ENST00000542502 SNX17Q15036 470 aa6.83□□□□□ -1.32
MDM2-228ENST00000542502 INTS4Q96HW7 963 aaKnown RBP6.83□□□□□ -1.32
MDM2-228ENST00000542502 KREMEN1Q96MU8 473 aa6.83□□□□□ -1.32
MDM2-228ENST00000542502 ASPNQ9BXN1 380 aa6.83□□□□□ -1.32
MDM2-228ENST00000542502 MCOLN1Q9GZU1 580 aa6.83□□□□□ -1.32
MDM2-228ENST00000542502 RAPGEF6Q8TEU7 1601 aa6.83□□□□□ -1.32
MDM2-228ENST00000542502 USP31Q70CQ4 1352 aa6.82□□□□□ -1.32
MDM2-228ENST00000542502 ABCA8O94911 1581 aa6.82□□□□□ -1.32
MDM2-228ENST00000542502 MAPKBP1O60336 1514 aa6.82□□□□□ -1.32
MDM2-228ENST00000542502 KDM5BQ9UGL1 1544 aa6.82□□□□□ -1.32
MDM2-228ENST00000542502 PLB1Q6P1J6 1458 aa6.82□□□□□ -1.32
MDM2-228ENST00000542502 LOC105371045A0A1W2PR82 267 aa6.82□□□□□ -1.32
MDM2-228ENST00000542502 SEMA7AO75326 666 aa6.82□□□□□ -1.32
MDM2-228ENST00000542502 CTSHP09668 335 aa6.82□□□□□ -1.32
MDM2-228ENST00000542502 RANGAP1P46060 587 aaPredicted RBP6.82□□□□□ -1.32
MDM2-228ENST00000542502 DLG4P78352 724 aa6.82□□□□□ -1.32
MDM2-228ENST00000542502 DUSP4Q13115 394 aa6.82□□□□□ -1.32
MDM2-228ENST00000542502 ZNF605Q86T29 641 aa6.82□□□□□ -1.32
MDM2-228ENST00000542502 IRF2BPLQ9H1B7 796 aa6.82□□□□□ -1.32
MDM2-228ENST00000542502 REV1Q9UBZ9 1251 aa6.82□□□□□ -1.32
MDM2-228ENST00000542502 HECW1Q76N89 1606 aa6.82□□□□□ -1.32
MDM2-228ENST00000542502 ADCY10Q96PN6 1610 aa6.82□□□□□ -1.32
MDM2-228ENST00000542502 FHOD3Q2V2M9 1422 aa6.82□□□□□ -1.32
MDM2-228ENST00000542502 CCDC18Q5T9S5 1454 aa6.81□□□□□ -1.32
MDM2-228ENST00000542502 FYCO1Q9BQS8 1478 aa6.81□□□□□ -1.32
MDM2-228ENST00000542502 MYOCOSA0A1B0GUC4 107 aa6.81□□□□□ -1.32
MDM2-228ENST00000542502 B8ZZF3 427 aa6.81□□□□□ -1.32
MDM2-228ENST00000542502 F13A1P00488 732 aa6.81□□□□□ -1.32
MDM2-228ENST00000542502 TEKQ02763 1124 aa6.81□□□□□ -1.32
MDM2-228ENST00000542502 ANKS4BQ8N8V4 417 aa6.81□□□□□ -1.32
MDM2-228ENST00000542502 BAHD1Q8TBE0 780 aaPredicted RBP6.81□□□□□ -1.32
MDM2-228ENST00000542502 CCDC74BQ96LY2 380 aa6.81□□□□□ -1.32
MDM2-228ENST00000542502 ZNF552Q9H707 407 aaPredicted RBP6.81□□□□□ -1.32
MDM2-228ENST00000542502 EBF1Q9UH73 591 aa6.81□□□□□ -1.32
MDM2-228ENST00000542502 CASKIN1Q8WXD9 1431 aa6.81□□□□□ -1.32
MDM2-228ENST00000542502 TTBK1Q5TCY1 1321 aaPredicted RBP6.8□□□□□ -1.32
MDM2-228ENST00000542502 SHISA3A0PJX4 238 aa6.8□□□□□ -1.32
MDM2-228ENST00000542502 CHURC1-FNTBB4DL54 471 aa6.8□□□□□ -1.32
MDM2-228ENST00000542502 PF4P02776 101 aa6.8□□□□□ -1.32
MDM2-228ENST00000542502 TMC4Q7Z404 712 aa6.8□□□□□ -1.32
MDM2-228ENST00000542502 LINC01599Q8WXQ3 324 aa6.8□□□□□ -1.32
MDM2-228ENST00000542502 KLHL3Q9UH77 587 aa6.8□□□□□ -1.32
MDM2-228ENST00000542502 GPR160Q9UJ42 338 aa6.8□□□□□ -1.32
MDM2-228ENST00000542502 ZNF281Q9Y2X9 895 aa6.8□□□□□ -1.32
MDM2-228ENST00000542502 TEX51A0A1B0GUA7 166 aa6.79□□□□□ -1.32
MDM2-228ENST00000542502 PLEKHD1A6NEE1 506 aa6.79□□□□□ -1.32
MDM2-228ENST00000542502 F6X3S4 739 aa6.79□□□□□ -1.32
MDM2-228ENST00000542502 HTR3BO95264 441 aa6.79□□□□□ -1.32
MDM2-228ENST00000542502 PDE6BP35913 854 aa6.79□□□□□ -1.32
MDM2-228ENST00000542502 CTSWP56202 376 aa6.79□□□□□ -1.32
MDM2-228ENST00000542502 XPCQ01831 940 aaPredicted RBP6.79□□□□□ -1.32
MDM2-228ENST00000542502 CLEC16AQ2KHT3 1053 aa6.79□□□□□ -1.32
MDM2-228ENST00000542502 SHISA4Q96DD7 197 aa6.79□□□□□ -1.32
MDM2-228ENST00000542502 RHOVQ96L33 236 aa6.79□□□□□ -1.32
MDM2-228ENST00000542502 PODXL2Q9NZ53 605 aa6.79□□□□□ -1.32
MDM2-228ENST00000542502 POLR3KQ9Y2Y1 108 aaPredicted RBP6.79□□□□□ -1.32
MDM2-228ENST00000542502 VPS8Q8N3P4 1428 aa6.78□□□□□ -1.32
MDM2-228ENST00000542502 GRIN3BO60391 1043 aa6.78□□□□□ -1.32
MDM2-228ENST00000542502 PSPNO60542 156 aa6.78□□□□□ -1.32
MDM2-228ENST00000542502 LCE5AQ5TCM9 118 aa6.78□□□□□ -1.32
MDM2-228ENST00000542502 TMEM132EQ6IEE7 984 aa6.78□□□□□ -1.32
MDM2-228ENST00000542502 SND1Q7KZF4 910 aaKnown RBP eCLIP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms