RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 ERLIN1O75477 346 aa17.29■□□□□ 0.36
CNOT9-208ENST00000542068 NTSR2O95665 410 aa17.29■□□□□ 0.36
CNOT9-208ENST00000542068 ERCC5P28715 1186 aaPredicted RBP17.29■□□□□ 0.36
CNOT9-208ENST00000542068 KRT2P35908 639 aa17.29■□□□□ 0.36
CNOT9-208ENST00000542068 BRD3Q15059 726 aa17.29■□□□□ 0.36
CNOT9-208ENST00000542068 APTXQ7Z2E3 356 aaKnown RBP17.29■□□□□ 0.36
CNOT9-208ENST00000542068 NLRP3Q96P20 1036 aa17.29■□□□□ 0.36
CNOT9-208ENST00000542068 VAT1LQ9HCJ6 419 aa17.29■□□□□ 0.36
CNOT9-208ENST00000542068 BRMS1Q9HCU9 246 aa17.29■□□□□ 0.36
CNOT9-208ENST00000542068 RSPH14Q9UHP6 348 aa17.29■□□□□ 0.36
CNOT9-208ENST00000542068 TBC1D9BQ66K14 1250 aa17.29■□□□□ 0.36
CNOT9-208ENST00000542068 PCMTD1Q96MG8 357 aaPredicted RBP17.29■□□□□ 0.36
CNOT9-208ENST00000542068 ZSCAN10Q96SZ4 725 aaPredicted RBP17.29■□□□□ 0.36
CNOT9-208ENST00000542068 SAP30BPQ9UHR5 308 aaKnown RBP17.29■□□□□ 0.36
CNOT9-208ENST00000542068 TNS2Q63HR2 1409 aa17.28■□□□□ 0.36
CNOT9-208ENST00000542068 PPP1R3GB7ZBB8 358 aa17.28■□□□□ 0.36
CNOT9-208ENST00000542068 ATP8B1O43520 1251 aa17.28■□□□□ 0.36
CNOT9-208ENST00000542068 MYO1BO43795 1136 aa17.28■□□□□ 0.36
CNOT9-208ENST00000542068 VEGFAP15692 232 aaPredicted RBP17.28■□□□□ 0.36
CNOT9-208ENST00000542068 RIN2Q8WYP3 895 aaPredicted RBP17.28■□□□□ 0.36
CNOT9-208ENST00000542068 GPKOWQ92917 476 aaPredicted RBP eCLIP17.28■□□□□ 0.367e-6■■■■■ 33.4
CNOT9-208ENST00000542068 MINPP1Q9UNW1 487 aa17.28■□□□□ 0.36
CNOT9-208ENST00000542068 MKNK2Q9HBH9 465 aa17.28■□□□□ 0.36
CNOT9-208ENST00000542068 ABCC12Q96J65 1359 aa17.28■□□□□ 0.36
CNOT9-208ENST00000542068 KDM4FA0A1W2PPD8 638 aa17.27■□□□□ 0.36
CNOT9-208ENST00000542068 ADAMTS3O15072 1205 aa17.27■□□□□ 0.36
CNOT9-208ENST00000542068 ERCC3P19447 782 aa17.27■□□□□ 0.36
CNOT9-208ENST00000542068 CASP8Q14790 479 aa17.27■□□□□ 0.36
CNOT9-208ENST00000542068 NT5DC1Q5TFE4 455 aa17.27■□□□□ 0.36
CNOT9-208ENST00000542068 TRIML1Q8N9V2 468 aa17.27■□□□□ 0.36
CNOT9-208ENST00000542068 NELFBQ8WX92 580 aa17.27■□□□□ 0.36
CNOT9-208ENST00000542068 DRC1Q96MC2 740 aa17.27■□□□□ 0.36
CNOT9-208ENST00000542068 LMTK3Q96Q04 1460 aa17.27■□□□□ 0.36
CNOT9-208ENST00000542068 UBXN6Q9BZV1 441 aa17.27■□□□□ 0.36
CNOT9-208ENST00000542068 CPVLQ9H3G5 476 aa17.27■□□□□ 0.36
CNOT9-208ENST00000542068 MYO1CO00159 1063 aa17.27■□□□□ 0.36
CNOT9-208ENST00000542068 RPS8P62241 208 aaKnown RBP17.27■□□□□ 0.36
CNOT9-208ENST00000542068 TTC38Q5R3I4 469 aa17.27■□□□□ 0.36
CNOT9-208ENST00000542068 CNGA4Q8IV77 575 aa17.27■□□□□ 0.36
CNOT9-208ENST00000542068 TMTC2Q8N394 836 aa17.27■□□□□ 0.36
CNOT9-208ENST00000542068 STAG1Q8WVM7 1258 aa17.27■□□□□ 0.36
CNOT9-208ENST00000542068 STK36Q9NRP7 1315 aa17.27■□□□□ 0.35
CNOT9-208ENST00000542068 DYNLL2Q96FJ2 89 aa17.27■□□□□ 0.35
CNOT9-208ENST00000542068 FAM84BQ96KN1 310 aaPredicted RBP17.27■□□□□ 0.35
CNOT9-208ENST00000542068 EIF3JO75822 258 aaKnown RBP17.26■□□□□ 0.35
CNOT9-208ENST00000542068 USP17L8P0C7I0 530 aa17.26■□□□□ 0.35
CNOT9-208ENST00000542068 HIBADHP31937 336 aaKnown RBP17.26■□□□□ 0.35
CNOT9-208ENST00000542068 DIXDC1Q155Q3 683 aa17.26■□□□□ 0.35
CNOT9-208ENST00000542068 CERS3Q8IU89 383 aa17.26■□□□□ 0.35
CNOT9-208ENST00000542068 CAGE1Q8TC20 777 aa17.26■□□□□ 0.35
CNOT9-208ENST00000542068 ABHD10Q9NUJ1 306 aa17.26■□□□□ 0.35
CNOT9-208ENST00000542068 SRCAPQ6ZRS2 3230 aa17.26■□□□□ 0.35
CNOT9-208ENST00000542068 COPB1P53618 953 aaKnown RBP17.26■□□□□ 0.35
CNOT9-208ENST00000542068 MECOMQ03112 1051 aa17.26■□□□□ 0.35
CNOT9-208ENST00000542068 RASGRP2Q7LDG7 609 aa17.26■□□□□ 0.35
CNOT9-208ENST00000542068 TXNRD3Q86VQ6 643 aa17.26■□□□□ 0.35
CNOT9-208ENST00000542068 TICAM2Q86XR7 235 aa17.26■□□□□ 0.35
CNOT9-208ENST00000542068 ZNF512BQ96KM6 892 aaPredicted RBP17.26■□□□□ 0.35
CNOT9-208ENST00000542068 CWC15Q9P013 229 aaKnown RBP17.26■□□□□ 0.35
CNOT9-208ENST00000542068 MYO5AQ9Y4I1 1855 aaKnown RBP17.26■□□□□ 0.35
CNOT9-208ENST00000542068 LRRIQ3A6PVS8 624 aaPredicted RBP17.25■□□□□ 0.35
CNOT9-208ENST00000542068 KCNJ18B7U540 433 aa17.25■□□□□ 0.35
CNOT9-208ENST00000542068 TULP2O00295 520 aa17.25■□□□□ 0.35
CNOT9-208ENST00000542068 GOLGA8HP0CJ92 632 aa17.25■□□□□ 0.35
CNOT9-208ENST00000542068 KCNJ12Q14500 433 aa17.25■□□□□ 0.35
CNOT9-208ENST00000542068 MYO6Q9UM54 1294 aa17.25■□□□□ 0.35
CNOT9-208ENST00000542068 ANKRD20A12PQ8NF67 263 aa17.25■□□□□ 0.35
CNOT9-208ENST00000542068 EXOC4Q96A65 974 aa17.25■□□□□ 0.35
CNOT9-208ENST00000542068 CTAGE1Q96RT6 745 aa17.25■□□□□ 0.35
CNOT9-208ENST00000542068 PSMB7Q99436 277 aa17.25■□□□□ 0.35
CNOT9-208ENST00000542068 PP2D1A8MPX8 630 aa17.25■□□□□ 0.35
CNOT9-208ENST00000542068 ACTN2P35609 894 aa17.25■□□□□ 0.35
CNOT9-208ENST00000542068 MATR3P43243 847 aaKnown RBP eCLIP17.25■□□□□ 0.355e-14■□□□□ 9.9
CNOT9-208ENST00000542068 LINC00116Q8NCU8 138 aa17.25■□□□□ 0.35
CNOT9-208ENST00000542068 UIMC1Q96RL1 719 aa17.25■□□□□ 0.35
CNOT9-208ENST00000542068 XDHP47989 1333 aa17.24■□□□□ 0.35
CNOT9-208ENST00000542068 MAP2K7O14733 419 aa17.24■□□□□ 0.35
CNOT9-208ENST00000542068 PPARDQ03181 441 aa17.24■□□□□ 0.35
CNOT9-208ENST00000542068 ALX1Q15699 326 aa17.24■□□□□ 0.35
CNOT9-208ENST00000542068 PKN1Q16512 942 aa17.24■□□□□ 0.35
CNOT9-208ENST00000542068 ZNF579Q8NAF0 562 aaKnown RBP17.24■□□□□ 0.35
CNOT9-208ENST00000542068 CRNKL1Q9BZJ0 848 aaKnown RBP17.24■□□□□ 0.35
CNOT9-208ENST00000542068 L1RE1Q9UN81 338 aa17.24■□□□□ 0.35
CNOT9-208ENST00000542068 RRP15Q9Y3B9 282 aaKnown RBP17.24■□□□□ 0.35
CNOT9-208ENST00000542068 ADAMTS7Q9UKP4 1686 aa17.24■□□□□ 0.35
CNOT9-208ENST00000542068 PAK1Q13153 545 aa17.24■□□□□ 0.35
CNOT9-208ENST00000542068 KIAA1328Q86T90 577 aa17.24■□□□□ 0.35
CNOT9-208ENST00000542068 SLC44A5Q8NCS7 719 aa17.24■□□□□ 0.35
CNOT9-208ENST00000542068 RASSF4Q9H2L5 321 aa17.24■□□□□ 0.35
CNOT9-208ENST00000542068 FAM204AQ9H8W3 233 aa17.24■□□□□ 0.35
CNOT9-208ENST00000542068 TTF2Q9UNY4 1162 aaKnown RBP17.24■□□□□ 0.35
CNOT9-208ENST00000542068 MACROD2A1Z1Q3 448 aa17.23■□□□□ 0.35
CNOT9-208ENST00000542068 CCDC122Q5T0U0 273 aa17.23■□□□□ 0.35
CNOT9-208ENST00000542068 CDKAL1Q5VV42 579 aa17.23■□□□□ 0.35
CNOT9-208ENST00000542068 CYP26C1Q6V0L0 522 aa17.23■□□□□ 0.35
CNOT9-208ENST00000542068 TMTC1Q8IUR5 882 aa17.23■□□□□ 0.35
CNOT9-208ENST00000542068 TFAP4Q01664 338 aa17.23■□□□□ 0.35
CNOT9-208ENST00000542068 TSR1Q2NL82 804 aaKnown RBP17.23■□□□□ 0.35
CNOT9-208ENST00000542068 GOLGA5Q8TBA6 731 aa17.23■□□□□ 0.35
CNOT9-208ENST00000542068 TTC26A0AVF1 554 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms