RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 MYPNQ86TC9 1320 aa11.52□□□□□ -0.57
YBX3-212ENST00000542002 GREB1LQ9C091 1923 aaPredicted RBP11.52□□□□□ -0.57
YBX3-212ENST00000542002 MYCP01106 439 aaPredicted RBP11.51□□□□□ -0.57
YBX3-212ENST00000542002 CYP21A2P08686 494 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 ELNP15502 786 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 MCCP23508 829 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 PRMT2P55345 433 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 SOX10P56693 466 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 COL9A3Q14050 684 aaPredicted RBP11.51□□□□□ -0.57
YBX3-212ENST00000542002 TMEM132BQ14DG7 1078 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 SLFN13Q68D06 897 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 GPR142Q7Z601 462 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 GMCL1P1Q8NEA9 526 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 REPS2Q8NFH8 660 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 RUFY2Q8WXA3 655 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 USP6NLQ92738 828 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 ZNF333Q96JL9 665 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 TMEM47Q9BQJ4 181 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 ZKSCAN3Q9BRR0 538 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 ESYT1Q9BSJ8 1104 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 MOV10L1Q9BXT6 1211 aaKnown RBP11.51□□□□□ -0.57
YBX3-212ENST00000542002 LSG1Q9H089 658 aaKnown RBP11.51□□□□□ -0.57
YBX3-212ENST00000542002 ZSWIM5Q9P217 1185 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 CTNNA3Q9UI47 895 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 PPP1R9AQ9ULJ8 1098 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 STX8Q9UNK0 236 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 RAD50Q92878 1312 aa11.51□□□□□ -0.57
YBX3-212ENST00000542002 POTEFA5A3E0 1075 aa11.5□□□□□ -0.57
YBX3-212ENST00000542002 B4E1Z4 1266 aa11.5□□□□□ -0.57
YBX3-212ENST00000542002 VWA5AO00534 786 aa11.5□□□□□ -0.57
YBX3-212ENST00000542002 ADCY3O60266 1144 aa11.5□□□□□ -0.57
YBX3-212ENST00000542002 KDM4AO75164 1064 aa11.5□□□□□ -0.57
YBX3-212ENST00000542002 MTFR1Q15390 333 aa11.5□□□□□ -0.57
YBX3-212ENST00000542002 IMMTQ16891 758 aaKnown RBP11.5□□□□□ -0.57
YBX3-212ENST00000542002 SLC9C1Q4G0N8 1177 aa11.5□□□□□ -0.57
YBX3-212ENST00000542002 MORN1Q5T089 497 aa11.5□□□□□ -0.57
YBX3-212ENST00000542002 STOX1Q6ZVD7 989 aa11.5□□□□□ -0.57
YBX3-212ENST00000542002 RAET1EQ8TD07 263 aa11.5□□□□□ -0.57
YBX3-212ENST00000542002 GTF3C2Q8WUA4 911 aaPredicted RBP11.5□□□□□ -0.57
YBX3-212ENST00000542002 COA7Q96BR5 231 aa11.5□□□□□ -0.57
YBX3-212ENST00000542002 SPATC1LQ9H0A9 340 aa11.5□□□□□ -0.57
YBX3-212ENST00000542002 SYNPO2Q9UMS6 1093 aa11.5□□□□□ -0.57
YBX3-212ENST00000542002 RLFQ13129 1914 aa11.49□□□□□ -0.57
YBX3-212ENST00000542002 PCP11498 1178 aaKnown RBP11.49□□□□□ -0.57
YBX3-212ENST00000542002 BMP3P12645 472 aa11.49□□□□□ -0.57
YBX3-212ENST00000542002 MAPK4P31152 587 aa11.49□□□□□ -0.57
YBX3-212ENST00000542002 GRK4P32298 578 aa11.49□□□□□ -0.57
YBX3-212ENST00000542002 TRIM32Q13049 653 aa11.49□□□□□ -0.57
YBX3-212ENST00000542002 IRF5Q13568 498 aa11.49□□□□□ -0.57
YBX3-212ENST00000542002 ERICH6BQ5W0A0 696 aa11.49□□□□□ -0.57
YBX3-212ENST00000542002 TTBK2Q6IQ55 1244 aa11.49□□□□□ -0.57
YBX3-212ENST00000542002 KCTD1Q719H9 257 aa11.49□□□□□ -0.57
YBX3-212ENST00000542002 CYB5R4Q7L1T6 521 aa11.49□□□□□ -0.57
YBX3-212ENST00000542002 PLEKHH3Q7Z736 793 aa11.49□□□□□ -0.57
YBX3-212ENST00000542002 ESR2Q92731 530 aa11.49□□□□□ -0.57
YBX3-212ENST00000542002 GMCL1Q96IK5 515 aa11.49□□□□□ -0.57
YBX3-212ENST00000542002 SLF1Q9BQI6 1058 aa11.49□□□□□ -0.57
YBX3-212ENST00000542002 RNF41Q9H4P4 317 aaPredicted RBP11.49□□□□□ -0.57
YBX3-212ENST00000542002 ZNF214Q9UL59 606 aaPredicted RBP11.49□□□□□ -0.57
YBX3-212ENST00000542002 TMEM232C9JQI7 657 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 E7EWF7 191 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 TOP1P11387 765 aaKnown RBP11.48□□□□□ -0.57
YBX3-212ENST00000542002 ERCC3P19447 782 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 CYP2B6P20813 491 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 PTPREP23469 700 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 SLC1A4P43007 532 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 RGS19P49795 217 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 SNAP25P60880 206 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 PLS1Q14651 629 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 CCL14Q16627 93 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 NBPF11Q86T75 865 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 MB21D1Q8N884 522 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 PRPF38AQ8NAV1 312 aaKnown RBP11.48□□□□□ -0.57
YBX3-212ENST00000542002 PXYLP1Q8TE99 480 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 ANKS1AQ92625 1134 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 KIFC2Q96AC6 838 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 TTC14Q96N46 770 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 MTMR7Q9Y216 660 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 RIPK3Q9Y572 518 aa11.48□□□□□ -0.57
YBX3-212ENST00000542002 RBM8AQ9Y5S9 174 aaKnown RBP11.48□□□□□ -0.57
YBX3-212ENST00000542002 COBLO75128 1261 aa11.47□□□□□ -0.57
YBX3-212ENST00000542002 EN2P19622 333 aaPredicted RBP11.47□□□□□ -0.57
YBX3-212ENST00000542002 STAT3P40763 770 aa11.47□□□□□ -0.57
YBX3-212ENST00000542002 CCNA1P78396 465 aa11.47□□□□□ -0.57
YBX3-212ENST00000542002 NECTIN1Q15223 517 aa11.47□□□□□ -0.57
YBX3-212ENST00000542002 WDR78Q5VTH9 848 aa11.47□□□□□ -0.57
YBX3-212ENST00000542002 DGKHQ86XP1 1220 aa11.47□□□□□ -0.57
YBX3-212ENST00000542002 ENAHQ8N8S7 591 aaPredicted RBP11.47□□□□□ -0.57
YBX3-212ENST00000542002 TRIB2Q92519 343 aa11.47□□□□□ -0.57
YBX3-212ENST00000542002 ZSCAN10Q96SZ4 725 aaPredicted RBP11.47□□□□□ -0.57
YBX3-212ENST00000542002 NUDT12Q9BQG2 462 aa11.47□□□□□ -0.57
YBX3-212ENST00000542002 SLC38A10Q9HBR0 1119 aa11.47□□□□□ -0.57
YBX3-212ENST00000542002 SENP2Q9HC62 589 aa11.47□□□□□ -0.57
YBX3-212ENST00000542002 FLRT1Q9NZU1 646 aa11.47□□□□□ -0.57
YBX3-212ENST00000542002 FEM1BQ9UK73 627 aa11.47□□□□□ -0.57
YBX3-212ENST00000542002 MKI67P46013 3256 aaKnown RBP11.47□□□□□ -0.57
YBX3-212ENST00000542002 ZNF536O15090 1300 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 FRMPD2Q68DX3 1309 aaPredicted RBP11.46□□□□□ -0.57
YBX3-212ENST00000542002 SLC15A5A6NIM6 579 aa11.46□□□□□ -0.57
YBX3-212ENST00000542002 IGHA2P01877 340 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms