RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 PDZD8Q8NEN9 1154 aa7.87□□□□□ -1.15
CIT-211ENST00000541841 FOXP3Q9BZS1 431 aa7.87□□□□□ -1.15
CIT-211ENST00000541841 EPB41L4BQ9H329 900 aa7.87□□□□□ -1.15
CIT-211ENST00000541841 CNNM2Q9H8M5 875 aa7.87□□□□□ -1.15
CIT-211ENST00000541841 PCDHGB7Q9Y5F8 929 aa7.87□□□□□ -1.15
CIT-211ENST00000541841 EFEMP2O95967 443 aa7.86□□□□□ -1.15
CIT-211ENST00000541841 NBPF9Q3BBW0 867 aa7.86□□□□□ -1.15
CIT-211ENST00000541841 ZNF394Q53GI3 561 aa7.86□□□□□ -1.15
CIT-211ENST00000541841 CDCP2Q5VXM1 449 aa7.86□□□□□ -1.15
CIT-211ENST00000541841 ZPBP2Q6X784 338 aa7.86□□□□□ -1.15
CIT-211ENST00000541841 NLRC3Q7RTR2 1065 aa7.86□□□□□ -1.15
CIT-211ENST00000541841 TMEM192Q8IY95 271 aa7.86□□□□□ -1.15
CIT-211ENST00000541841 USHBP1Q8N6Y0 703 aa7.86□□□□□ -1.15
CIT-211ENST00000541841 NKD1Q969G9 470 aa7.86□□□□□ -1.15
CIT-211ENST00000541841 BACH2Q9BYV9 841 aa7.86□□□□□ -1.15
CIT-211ENST00000541841 ASCC2Q9H1I8 757 aaPredicted RBP7.86□□□□□ -1.15
CIT-211ENST00000541841 MEIS1O00470 390 aa7.85□□□□□ -1.15
CIT-211ENST00000541841 PSPNO60542 156 aa7.85□□□□□ -1.15
CIT-211ENST00000541841 FKTNO75072 461 aa7.85□□□□□ -1.15
CIT-211ENST00000541841 PRAMEF1O95521 474 aa7.85□□□□□ -1.15
CIT-211ENST00000541841 TSPAN15O95858 294 aa7.85□□□□□ -1.15
CIT-211ENST00000541841 RPL10P27635 214 aaKnown RBP7.85□□□□□ -1.15
CIT-211ENST00000541841 SPOCD1Q6ZMY3 1216 aa7.85□□□□□ -1.15
CIT-211ENST00000541841 KIAA0825Q8IV33 1275 aa7.85□□□□□ -1.15
CIT-211ENST00000541841 SIRT2Q8IXJ6 389 aa7.85□□□□□ -1.15
CIT-211ENST00000541841 SYTL5Q8TDW5 730 aaPredicted RBP7.85□□□□□ -1.15
CIT-211ENST00000541841 SPON2Q9BUD6 331 aa7.85□□□□□ -1.15
CIT-211ENST00000541841 G6PC3Q9BUM1 346 aa7.85□□□□□ -1.15
CIT-211ENST00000541841 PRDM14Q9GZV8 571 aa7.85□□□□□ -1.15
CIT-211ENST00000541841 GPR160Q9UJ42 338 aa7.85□□□□□ -1.15
CIT-211ENST00000541841 USP2O75604 605 aaPredicted RBP7.84□□□□□ -1.15
CIT-211ENST00000541841 RNF4P78317 190 aa7.84□□□□□ -1.15
CIT-211ENST00000541841 WAPLQ7Z5K2 1190 aa7.84□□□□□ -1.15
CIT-211ENST00000541841 OXR1Q8N573 874 aa7.84□□□□□ -1.15
CIT-211ENST00000541841 SREK1Q8WXA9 508 aaKnown RBP7.84□□□□□ -1.15
CIT-211ENST00000541841 TCTN2Q96GX1 697 aa7.84□□□□□ -1.15
CIT-211ENST00000541841 DRC1Q96MC2 740 aa7.84□□□□□ -1.15
CIT-211ENST00000541841 SLC6A18Q96N87 628 aa7.84□□□□□ -1.15
CIT-211ENST00000541841 C8orf37Q96NL8 207 aa7.84□□□□□ -1.15
CIT-211ENST00000541841 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.84□□□□□ -1.15
CIT-211ENST00000541841 FITM1A5D6W6 292 aa7.83□□□□□ -1.16
CIT-211ENST00000541841 NOTOA8MTQ0 251 aa7.83□□□□□ -1.16
CIT-211ENST00000541841 CLEC3AO75596 197 aa7.83□□□□□ -1.16
CIT-211ENST00000541841 RECKO95980 971 aa7.83□□□□□ -1.16
CIT-211ENST00000541841 NME1P15531 152 aaKnown RBP7.83□□□□□ -1.16
CIT-211ENST00000541841 CFPP27918 469 aa7.83□□□□□ -1.16
CIT-211ENST00000541841 ZNF76P36508 570 aa7.83□□□□□ -1.16
CIT-211ENST00000541841 ZNF165P49910 485 aa7.83□□□□□ -1.16
CIT-211ENST00000541841 ZNF605Q86T29 641 aa7.83□□□□□ -1.16
CIT-211ENST00000541841 SLITRK4Q8IW52 837 aa7.83□□□□□ -1.16
CIT-211ENST00000541841 DHX38Q92620 1227 aaKnown RBP7.83□□□□□ -1.16
CIT-211ENST00000541841 SYTL4Q96C24 671 aaPredicted RBP7.83□□□□□ -1.16
CIT-211ENST00000541841 PPP1R16BQ96T49 567 aa7.83□□□□□ -1.16
CIT-211ENST00000541841 NT5C1AQ9BXI3 368 aa7.83□□□□□ -1.16
CIT-211ENST00000541841 ZMYM5Q9UJ78 669 aa7.83□□□□□ -1.16
CIT-211ENST00000541841 TCFL5Q9UL49 500 aa7.83□□□□□ -1.16
CIT-211ENST00000541841 TMEM82A0PJX8 343 aa7.82□□□□□ -1.16
CIT-211ENST00000541841 ETV2O00321 342 aaPredicted RBP7.82□□□□□ -1.16
CIT-211ENST00000541841 NFIBO00712 420 aa7.82□□□□□ -1.16
CIT-211ENST00000541841 SYPP08247 313 aa7.82□□□□□ -1.16
CIT-211ENST00000541841 VAMP1P23763 118 aa7.82□□□□□ -1.16
CIT-211ENST00000541841 FANCCQ00597 558 aa7.82□□□□□ -1.16
CIT-211ENST00000541841 USP48Q86UV5 1035 aa7.82□□□□□ -1.16
CIT-211ENST00000541841 C1QL4Q86Z23 238 aa7.82□□□□□ -1.16
CIT-211ENST00000541841 REXO1Q8N1G1 1221 aaKnown RBP7.82□□□□□ -1.16
CIT-211ENST00000541841 BHLHE22Q8NFJ8 381 aaPredicted RBP7.82□□□□□ -1.16
CIT-211ENST00000541841 LINC01599Q8WXQ3 324 aa7.82□□□□□ -1.16
CIT-211ENST00000541841 SLC9A7Q96T83 725 aa7.82□□□□□ -1.16
CIT-211ENST00000541841 MKRN2Q9H000 416 aaKnown RBP7.82□□□□□ -1.16
CIT-211ENST00000541841 GFOD1Q9NXC2 390 aa7.82□□□□□ -1.16
CIT-211ENST00000541841 ZNF281Q9Y2X9 895 aa7.82□□□□□ -1.16
CIT-211ENST00000541841 NPIPB6E9PJ23 425 aa7.81□□□□□ -1.16
CIT-211ENST00000541841 BBS9Q3SYG4 887 aa7.81□□□□□ -1.16
CIT-211ENST00000541841 ATG14Q6ZNE5 492 aa7.81□□□□□ -1.16
CIT-211ENST00000541841 LRRC56Q8IYG6 542 aaPredicted RBP7.81□□□□□ -1.16
CIT-211ENST00000541841 DAGLBQ8NCG7 672 aa7.81□□□□□ -1.16
CIT-211ENST00000541841 SHISA4Q96DD7 197 aa7.81□□□□□ -1.16
CIT-211ENST00000541841 INTS4Q96HW7 963 aaKnown RBP7.81□□□□□ -1.16
CIT-211ENST00000541841 SSU72P8A0A1W2PR75 194 aa7.8□□□□□ -1.16
CIT-211ENST00000541841 MEIS3P2A8K0S8 358 aa7.8□□□□□ -1.16
CIT-211ENST00000541841 TMEM253P0C7T8 217 aa7.8□□□□□ -1.16
CIT-211ENST00000541841 ACRP10323 421 aa7.8□□□□□ -1.16
CIT-211ENST00000541841 ZC3H6P61129 1189 aaKnown RBP7.8□□□□□ -1.16
CIT-211ENST00000541841 DUSP4Q13115 394 aa7.8□□□□□ -1.16
CIT-211ENST00000541841 KIR3DS1Q14943 382 aa7.8□□□□□ -1.16
CIT-211ENST00000541841 NR0B2Q15466 257 aa7.8□□□□□ -1.16
CIT-211ENST00000541841 LCE4AQ5TA78 99 aa7.8□□□□□ -1.16
CIT-211ENST00000541841 RNF111Q6ZNA4 994 aa7.8□□□□□ -1.16
CIT-211ENST00000541841 ANKLE2Q86XL3 938 aa7.8□□□□□ -1.16
CIT-211ENST00000541841 LILRA2Q8N149 483 aa7.8□□□□□ -1.16
CIT-211ENST00000541841 ZNF655Q8N720 491 aaPredicted RBP7.8□□□□□ -1.16
CIT-211ENST00000541841 ANKS4BQ8N8V4 417 aa7.8□□□□□ -1.16
CIT-211ENST00000541841 ENOX1Q8TC92 643 aaKnown RBP7.8□□□□□ -1.16
CIT-211ENST00000541841 FAM86C1Q9NVL1 165 aa7.8□□□□□ -1.16
CIT-211ENST00000541841 PPP1R1BQ9UD71 204 aaPredicted RBP7.8□□□□□ -1.16
CIT-211ENST00000541841 YBX2Q9Y2T7 364 aaKnown RBP7.8□□□□□ -1.16
CIT-211ENST00000541841 C9IYK1 514 aa7.79□□□□□ -1.16
CIT-211ENST00000541841 TNFRSF10CO14798 259 aa7.79□□□□□ -1.16
CIT-211ENST00000541841 SIGLEC6O43699 453 aa7.79□□□□□ -1.16
CIT-211ENST00000541841 PDE6BP35913 854 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms