RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 FAM193AP78312 1265 aa17■□□□□ 0.31
VARS2-211ENST00000541562 TMCO3Q6UWJ1 677 aa17■□□□□ 0.31
VARS2-211ENST00000541562 TMTC2Q8N394 836 aa17■□□□□ 0.31
VARS2-211ENST00000541562 ARHGEF1Q92888 912 aaKnown RBP17■□□□□ 0.31
VARS2-211ENST00000541562 PHF20Q9BVI0 1012 aa17■□□□□ 0.31
VARS2-211ENST00000541562 IL17RBQ9NRM6 502 aa17■□□□□ 0.31
VARS2-211ENST00000541562 PRCPP42785 496 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 CYP27A1Q02318 531 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 NCAPH2Q6IBW4 605 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 ANKRD13CQ8N6S4 541 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 KRT9P35527 623 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 DMTNQ08495 405 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 KRT31Q15323 416 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 LRRC41Q15345 812 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 KRT222Q8N1A0 295 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 MLKLQ8NB16 471 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 TRIM47Q96LD4 638 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 TIGD1Q96MW7 591 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 SRRTQ9BXP5 876 aaKnown RBP16.99■□□□□ 0.31
VARS2-211ENST00000541562 RNF26Q9BY78 433 aaPredicted RBP16.99■□□□□ 0.31
VARS2-211ENST00000541562 PARP3Q9Y6F1 533 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 KIF1AQ12756 1690 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 NAPAP54920 295 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 FAM196AQ6ZSG2 479 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 SLC35F6Q8N357 371 aa16.99■□□□□ 0.31
VARS2-211ENST00000541562 BSDC1Q9NW68 430 aaPredicted RBP16.99■□□□□ 0.31
VARS2-211ENST00000541562 SPATA31A1Q5TZJ5 1347 aa16.98■□□□□ 0.31
VARS2-211ENST00000541562 MARCH6O60337 910 aa16.98■□□□□ 0.31
VARS2-211ENST00000541562 SLFN14P0C7P3 912 aa16.98■□□□□ 0.31
VARS2-211ENST00000541562 TMEM139Q8IV31 216 aa16.98■□□□□ 0.31
VARS2-211ENST00000541562 FBXL16Q8N461 479 aa16.98■□□□□ 0.31
VARS2-211ENST00000541562 ZSCAN12O43309 604 aa16.98■□□□□ 0.31
VARS2-211ENST00000541562 UFL1O94874 794 aa16.98■□□□□ 0.31
VARS2-211ENST00000541562 FCER1AP12319 257 aa16.98■□□□□ 0.31
VARS2-211ENST00000541562 FILIP1LQ4L180 1135 aa16.98■□□□□ 0.31
VARS2-211ENST00000541562 ARHGAP6O43182 974 aa16.98■□□□□ 0.31
VARS2-211ENST00000541562 TCP10Q12799 353 aa16.98■□□□□ 0.31
VARS2-211ENST00000541562 DOK7Q18PE1 504 aa16.98■□□□□ 0.31
VARS2-211ENST00000541562 SHROOM1Q2M3G4 852 aaPredicted RBP16.98■□□□□ 0.31
VARS2-211ENST00000541562 SLC30A10Q6XR72 485 aa16.98■□□□□ 0.31
VARS2-211ENST00000541562 SLC39A2Q9NP94 309 aa16.98■□□□□ 0.31
VARS2-211ENST00000541562 CNTNAP5Q8WYK1 1306 aa16.97■□□□□ 0.31
VARS2-211ENST00000541562 MACROD2A1Z1Q3 448 aa16.97■□□□□ 0.31
VARS2-211ENST00000541562 B4DLN1 442 aa16.97■□□□□ 0.31
VARS2-211ENST00000541562 ARID5AQ03989 594 aa16.97■□□□□ 0.31
VARS2-211ENST00000541562 FUT2Q10981 343 aa16.97■□□□□ 0.31
VARS2-211ENST00000541562 NPY5RQ15761 445 aa16.97■□□□□ 0.31
VARS2-211ENST00000541562 TPTE2Q6XPS3 522 aa16.97■□□□□ 0.31
VARS2-211ENST00000541562 ZNF512BQ96KM6 892 aaPredicted RBP16.97■□□□□ 0.31
VARS2-211ENST00000541562 PPP1R3GB7ZBB8 358 aa16.97■□□□□ 0.31
VARS2-211ENST00000541562 DNAAF5Q86Y56 855 aa16.97■□□□□ 0.31
VARS2-211ENST00000541562 GSPT2Q8IYD1 628 aaKnown RBP16.97■□□□□ 0.31
VARS2-211ENST00000541562 BLIDQ8IZY5 108 aa16.97■□□□□ 0.31
VARS2-211ENST00000541562 IQUBQ8NA54 791 aa16.97■□□□□ 0.31
VARS2-211ENST00000541562 SMCR8Q8TEV9 937 aaPredicted RBP16.97■□□□□ 0.31
VARS2-211ENST00000541562 BPIFA3Q9BQP9 254 aa16.97■□□□□ 0.31
VARS2-211ENST00000541562 TRIM34Q9BYJ4 488 aa16.97■□□□□ 0.31
VARS2-211ENST00000541562 DUSP10Q9Y6W6 482 aa16.97■□□□□ 0.31
VARS2-211ENST00000541562 CYTH3O43739 400 aa16.96■□□□□ 0.31
VARS2-211ENST00000541562 RNASE9P60153 205 aaKnown RBP16.96■□□□□ 0.31
VARS2-211ENST00000541562 UBE4AQ14139 1066 aa16.96■□□□□ 0.31
VARS2-211ENST00000541562 SLC35G1Q2M3R5 365 aa16.96■□□□□ 0.31
VARS2-211ENST00000541562 RTCBQ9Y3I0 505 aaKnown RBP16.96■□□□□ 0.31
VARS2-211ENST00000541562 RTL9Q8NET4 1388 aa16.96■□□□□ 0.31
VARS2-211ENST00000541562 TOGARAM1Q9Y4F4 1720 aa16.96■□□□□ 0.31
VARS2-211ENST00000541562 PNPLA7Q6ZV29 1317 aa16.96■□□□□ 0.31
VARS2-211ENST00000541562 A0A0U1RQG5 324 aaPredicted RBP16.96■□□□□ 0.31
VARS2-211ENST00000541562 PRPF3O43395 683 aaKnown RBP16.96■□□□□ 0.31
VARS2-211ENST00000541562 GYPCP04921 128 aa16.96■□□□□ 0.31
VARS2-211ENST00000541562 ASIC1P78348 528 aa16.96■□□□□ 0.31
VARS2-211ENST00000541562 CCDC155Q8N6L0 562 aa16.96■□□□□ 0.31
VARS2-211ENST00000541562 ENOX1Q8TC92 643 aaKnown RBP16.96■□□□□ 0.31
VARS2-211ENST00000541562 PSDA5PKW4 1024 aaPredicted RBP16.95■□□□□ 0.3
VARS2-211ENST00000541562 KCNJ18B7U540 433 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 KLRF2D3W0D1 207 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 KCNJ12Q14500 433 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 RCSD1Q6JBY9 416 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 RGS22Q8NE09 1264 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 PIGSQ96S52 555 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 PARD6BQ9BYG5 372 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 DACH1Q9UI36 760 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 SCAF8Q9UPN6 1271 aaKnown RBP16.95■□□□□ 0.3
VARS2-211ENST00000541562 CCDC175P0C221 793 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 ST5P78524 1137 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 NR1I3Q14994 352 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 UBE2SQ16763 222 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 SPATA1Q5VX52 437 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 DTHD1Q6ZMT9 781 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 NOL10Q9BSC4 688 aaKnown RBP16.95■□□□□ 0.3
VARS2-211ENST00000541562 ANKRD65E5RJM6 399 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 RPN1P04843 607 aaKnown RBP16.95■□□□□ 0.3
VARS2-211ENST00000541562 PNMA6AP0CW24 399 aaPredicted RBP16.95■□□□□ 0.3
VARS2-211ENST00000541562 LRRC15Q8TF66 581 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 SMARCAL1Q9NZC9 954 aa16.95■□□□□ 0.3
VARS2-211ENST00000541562 SASH3O75995 380 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 GTF2IP78347 998 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 TEX11Q8IYF3 940 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 PCDHAC2Q9Y5I4 1007 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 MYH13Q9UKX3 1938 aa16.94■□□□□ 0.3
VARS2-211ENST00000541562 ZNF18P17022 549 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms