RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 PIK3AP1Q6ZUJ8 805 aa23.06■■□□□ 1.28
OTUB1-210ENST00000541478 HEATR3Q7Z4Q2 680 aa23.06■■□□□ 1.28
OTUB1-210ENST00000541478 VPS33BQ9H267 617 aa23.06■■□□□ 1.28
OTUB1-210ENST00000541478 PDHBP11177 359 aa23.05■■□□□ 1.28
OTUB1-210ENST00000541478 WWC2Q6AWC2 1192 aa23.05■■□□□ 1.28
OTUB1-210ENST00000541478 CNNM3Q8NE01 707 aa23.05■■□□□ 1.28
OTUB1-210ENST00000541478 TRIM34Q9BYJ4 488 aa23.05■■□□□ 1.28
OTUB1-210ENST00000541478 RTN4Q9NQC3 1192 aaKnown RBP23.05■■□□□ 1.28
OTUB1-210ENST00000541478 YDJCA8MPS7 323 aa23.05■■□□□ 1.28
OTUB1-210ENST00000541478 VEGFAP15692 232 aaPredicted RBP23.05■■□□□ 1.28
OTUB1-210ENST00000541478 MSNP26038 577 aaKnown RBP23.05■■□□□ 1.28
OTUB1-210ENST00000541478 BECN2A8MW95 431 aa23.04■■□□□ 1.28
OTUB1-210ENST00000541478 hCG_1984214I3L0E3 225 aa23.04■■□□□ 1.28
OTUB1-210ENST00000541478 STXBP3O00186 592 aa23.04■■□□□ 1.28
OTUB1-210ENST00000541478 DPEP1P16444 411 aa23.04■■□□□ 1.28
OTUB1-210ENST00000541478 R3HDM1Q15032 1099 aaKnown RBP23.04■■□□□ 1.28
OTUB1-210ENST00000541478 SLC35G1Q2M3R5 365 aa23.04■■□□□ 1.28
OTUB1-210ENST00000541478 KRBA2Q6ZNG9 492 aa23.04■■□□□ 1.28
OTUB1-210ENST00000541478 C11orf57Q6ZUT1 292 aaPredicted RBP23.04■■□□□ 1.28
OTUB1-210ENST00000541478 ZSCAN29Q8IWY8 852 aaPredicted RBP23.04■■□□□ 1.28
OTUB1-210ENST00000541478 ZNF713Q8N859 430 aaPredicted RBP23.04■■□□□ 1.28
OTUB1-210ENST00000541478 CCDC34Q96HJ3 373 aa23.04■■□□□ 1.28
OTUB1-210ENST00000541478 RRAGDQ9NQL2 400 aaPredicted RBP23.04■■□□□ 1.28
OTUB1-210ENST00000541478 FAM198AQ9UFP1 575 aa23.04■■□□□ 1.28
OTUB1-210ENST00000541478 PSME4Q14997 1843 aa23.04■■□□□ 1.28
OTUB1-210ENST00000541478 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.03■■□□□ 1.28
OTUB1-210ENST00000541478 SNHG28P0DPA3 235 aa23.03■■□□□ 1.28
OTUB1-210ENST00000541478 TCP10Q12799 353 aa23.03■■□□□ 1.28
OTUB1-210ENST00000541478 CLIP2Q9UDT6 1046 aa23.03■■□□□ 1.28
OTUB1-210ENST00000541478 KIF13BQ9NQT8 1826 aa23.03■■□□□ 1.28
OTUB1-210ENST00000541478 CCDC194A0A1B0GVG4 234 aa23.03■■□□□ 1.28
OTUB1-210ENST00000541478 MPHOSPH10O00566 681 aaKnown RBP23.03■■□□□ 1.28
OTUB1-210ENST00000541478 ENTPD3O75355 529 aa23.03■■□□□ 1.28
OTUB1-210ENST00000541478 ATP2C1P98194 919 aaPredicted RBP23.03■■□□□ 1.28
OTUB1-210ENST00000541478 IQCB1Q15051 598 aa23.03■■□□□ 1.28
OTUB1-210ENST00000541478 CFAP100Q494V2 611 aa23.03■■□□□ 1.28
OTUB1-210ENST00000541478 LRRC47Q8N1G4 583 aaKnown RBP23.03■■□□□ 1.28
OTUB1-210ENST00000541478 LARGE2Q8N3Y3 721 aa23.03■■□□□ 1.28
OTUB1-210ENST00000541478 ERCC4Q92889 916 aaPredicted RBP23.03■■□□□ 1.28
OTUB1-210ENST00000541478 USP17L5A8MUK1 530 aa23.02■■□□□ 1.28
OTUB1-210ENST00000541478 KCNA3P22001 575 aa23.02■■□□□ 1.28
OTUB1-210ENST00000541478 CACNB3P54284 484 aa23.02■■□□□ 1.28
OTUB1-210ENST00000541478 NLRP12P59046 1061 aa23.02■■□□□ 1.28
OTUB1-210ENST00000541478 KANK3Q6NY19 840 aa23.02■■□□□ 1.28
OTUB1-210ENST00000541478 RSBN1LQ6PCB5 846 aaPredicted RBP23.02■■□□□ 1.28
OTUB1-210ENST00000541478 FOXP4Q8IVH2 680 aaPredicted RBP23.02■■□□□ 1.28
OTUB1-210ENST00000541478 CSRNP2Q9H175 543 aa23.02■■□□□ 1.28
OTUB1-210ENST00000541478 RIOX1Q9H6W3 641 aa23.02■■□□□ 1.28
OTUB1-210ENST00000541478 HDAC9Q9UKV0 1011 aa23.02■■□□□ 1.28
OTUB1-210ENST00000541478 PCDHAC2Q9Y5I4 1007 aa23.02■■□□□ 1.28
OTUB1-210ENST00000541478 GREB1LQ9C091 1923 aaPredicted RBP23.02■■□□□ 1.28
OTUB1-210ENST00000541478 COL2A1P02458 1487 aaPredicted RBP23.01■■□□□ 1.27
OTUB1-210ENST00000541478 GNA11P29992 359 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 NAPAP54920 295 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 GRIN1Q05586 938 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 ZNF174Q15697 407 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 SPECC1Q5M775 1068 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 TYW1BQ6NUM6 668 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 RASGRP2Q7LDG7 609 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 ZFPM1Q8IX07 1006 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 BPIFA3Q9BQP9 254 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 ZMYND12Q9H0C1 365 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 TMOD2Q9NZR1 351 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 TUBE1Q9UJT0 475 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 M0R2N6 131 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 EIF6P56537 245 aaKnown RBP23.01■■□□□ 1.27
OTUB1-210ENST00000541478 TGFB2P61812 414 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 LONRF3Q496Y0 759 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 GPATCH4Q5T3I0 446 aaKnown RBP23.01■■□□□ 1.27
OTUB1-210ENST00000541478 HOMER1Q86YM7 354 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 C6orf50Q9HD87 102 aa23.01■■□□□ 1.27
OTUB1-210ENST00000541478 ATRNL1Q5VV63 1379 aa23■■□□□ 1.27
OTUB1-210ENST00000541478 DDTLA6NHG4 134 aaPredicted RBP23■■□□□ 1.27
OTUB1-210ENST00000541478 GOLGA6L6A8MZA4 724 aa23■■□□□ 1.27
OTUB1-210ENST00000541478 POLR2DO15514 142 aaKnown RBP23■■□□□ 1.27
OTUB1-210ENST00000541478 CLCN1P35523 988 aa23■■□□□ 1.27
OTUB1-210ENST00000541478 PTGDRQ13258 359 aa23■■□□□ 1.27
OTUB1-210ENST00000541478 CERKLQ49MI3 558 aaPredicted RBP23■■□□□ 1.27
OTUB1-210ENST00000541478 NOM1Q5C9Z4 860 aaKnown RBP23■■□□□ 1.27
OTUB1-210ENST00000541478 TDRD3Q9H7E2 651 aaKnown RBP23■■□□□ 1.27
OTUB1-210ENST00000541478 DNAJC18Q9H819 358 aa23■■□□□ 1.27
OTUB1-210ENST00000541478 AP5Z1O43299 807 aa22.99■■□□□ 1.27
OTUB1-210ENST00000541478 ARL6IP4Q66PJ3 421 aaKnown RBP22.99■■□□□ 1.27
OTUB1-210ENST00000541478 PCDHA6Q9UN73 950 aa22.99■■□□□ 1.27
OTUB1-210ENST00000541478 ZKSCAN5Q9Y2L8 839 aa22.99■■□□□ 1.27
OTUB1-210ENST00000541478 PCDHA8Q9Y5H6 950 aa22.99■■□□□ 1.27
OTUB1-210ENST00000541478 PSDA5PKW4 1024 aaPredicted RBP22.98■■□□□ 1.27
OTUB1-210ENST00000541478 VIL1P09327 827 aaKnown RBP22.98■■□□□ 1.27
OTUB1-210ENST00000541478 ZNF543Q08ER8 600 aa22.98■■□□□ 1.27
OTUB1-210ENST00000541478 DPCR1Q3MIW9 517 aa22.98■■□□□ 1.27
OTUB1-210ENST00000541478 OGFOD1Q8N543 542 aa22.98■■□□□ 1.27
OTUB1-210ENST00000541478 CPVLQ9H3G5 476 aa22.98■■□□□ 1.27
OTUB1-210ENST00000541478 ZNF277Q9NRM2 450 aaPredicted RBP22.98■■□□□ 1.27
OTUB1-210ENST00000541478 PIM2Q9P1W9 311 aa22.98■■□□□ 1.27
OTUB1-210ENST00000541478 FRMPD2Q68DX3 1309 aaPredicted RBP22.98■■□□□ 1.27
OTUB1-210ENST00000541478 SIPA1L1O43166 1804 aa22.98■■□□□ 1.27
OTUB1-210ENST00000541478 ESYT2A0FGR8 921 aa22.98■■□□□ 1.27
OTUB1-210ENST00000541478 WNT7AO00755 349 aa22.98■■□□□ 1.27
OTUB1-210ENST00000541478 POLD1P28340 1107 aa22.98■■□□□ 1.27
OTUB1-210ENST00000541478 MCM7P33993 719 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms