RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 HELLSQ9NRZ9 838 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.89□□□□□ -1.31
CDKN3-206ENST00000541304 CACNA1SQ13698 1873 aa6.89□□□□□ -1.31
CDKN3-206ENST00000541304 DOCK2Q92608 1830 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 CNTNAP5Q8WYK1 1306 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 USP17L3A6NCW0 530 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 USP17L4A6NCW7 530 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 TMEM229AB2RXF0 380 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 NFKBIEO00221 500 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 GOLIM4O00461 696 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 LDHBP07195 334 aaKnown RBP6.88□□□□□ -1.31
CDKN3-206ENST00000541304 BMP4P12644 408 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 SKIP12755 728 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 GNAT2P19087 354 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 FGFR3P22607 806 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 ZAP70P43403 619 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 NT5C2P49902 561 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 EIF6P56537 245 aaKnown RBP6.88□□□□□ -1.31
CDKN3-206ENST00000541304 MTFR1Q15390 333 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 AOC3Q16853 763 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 TTLL5Q6EMB2 1281 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 USP17L1Q7RTZ2 530 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 DZIP1Q86YF9 867 aaKnown RBP6.88□□□□□ -1.31
CDKN3-206ENST00000541304 BEND7Q8N7W2 519 aaPredicted RBP6.88□□□□□ -1.31
CDKN3-206ENST00000541304 GOLGA6L1Q8N7Z2 621 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 APPBP2Q92624 585 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 KLRG1Q96E93 195 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 NOL10Q9BSC4 688 aaKnown RBP6.88□□□□□ -1.31
CDKN3-206ENST00000541304 NDFIP2Q9NV92 336 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 LRP2BPQ9P2M1 347 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 SERTAD1Q9UHV2 236 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 HDAC9Q9UKV0 1011 aa6.88□□□□□ -1.31
CDKN3-206ENST00000541304 TAF1P21675 1872 aa6.87□□□□□ -1.31
CDKN3-206ENST00000541304 COL1A1P02452 1464 aaPredicted RBP6.87□□□□□ -1.31
CDKN3-206ENST00000541304 ZMYM6O95789 1325 aa6.87□□□□□ -1.31
CDKN3-206ENST00000541304 FZD9O00144 591 aa6.87□□□□□ -1.31
CDKN3-206ENST00000541304 RNF113AO15541 343 aaKnown RBP6.87□□□□□ -1.31
CDKN3-206ENST00000541304 RAD21O60216 631 aa6.87□□□□□ -1.31
CDKN3-206ENST00000541304 LZTS3O60299 673 aaPredicted RBP6.87□□□□□ -1.31
CDKN3-206ENST00000541304 IDH1O75874 414 aaKnown RBP6.87□□□□□ -1.31
CDKN3-206ENST00000541304 BAG3O95817 575 aa6.87□□□□□ -1.31
CDKN3-206ENST00000541304 CYP2E1P05181 493 aaPredicted RBP6.87□□□□□ -1.31
CDKN3-206ENST00000541304 KLRK1P26718 216 aa6.87□□□□□ -1.31
CDKN3-206ENST00000541304 GPR162Q16538 588 aa6.87□□□□□ -1.31
CDKN3-206ENST00000541304 MFSD14BQ5SR56 506 aa6.87□□□□□ -1.31
CDKN3-206ENST00000541304 SLCO4C1Q6ZQN7 724 aa6.87□□□□□ -1.31
CDKN3-206ENST00000541304 TXNRD3Q86VQ6 643 aa6.87□□□□□ -1.31
CDKN3-206ENST00000541304 NLRP8Q86W28 1048 aa6.87□□□□□ -1.31
CDKN3-206ENST00000541304 OGFOD1Q8N543 542 aa6.87□□□□□ -1.31
CDKN3-206ENST00000541304 BCL11AQ9H165 835 aa6.87□□□□□ -1.31
CDKN3-206ENST00000541304 ZNF277Q9NRM2 450 aaPredicted RBP6.87□□□□□ -1.31
CDKN3-206ENST00000541304 DNAAF2Q9NVR5 837 aaKnown RBP6.87□□□□□ -1.31
CDKN3-206ENST00000541304 NOD1Q9Y239 953 aa6.87□□□□□ -1.31
CDKN3-206ENST00000541304 MYH13Q9UKX3 1938 aa6.87□□□□□ -1.31
CDKN3-206ENST00000541304 PSME4Q14997 1843 aa6.87□□□□□ -1.31
CDKN3-206ENST00000541304 A6NJY4 79 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 SNAP23O00161 211 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 BNIP3LO60238 219 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 VIL1P09327 827 aaKnown RBP6.86□□□□□ -1.31
CDKN3-206ENST00000541304 PDE6AP16499 860 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 MCCP23508 829 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 CHMLP26374 656 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 ADD2P35612 726 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 GTF2IP78347 998 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 CHAF1AQ13111 956 aaPredicted RBP6.86□□□□□ -1.31
CDKN3-206ENST00000541304 MCMDC2Q4G0Z9 681 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 DACT2Q5SW24 774 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 SLC9C2Q5TAH2 1124 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 TSHZ3Q63HK5 1081 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 CIAPIN1Q6FI81 312 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 NAA16Q6N069 864 aaPredicted RBP6.86□□□□□ -1.31
CDKN3-206ENST00000541304 GIMAP6Q6P9H5 292 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 HHIPL2Q6UWX4 724 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 KIAA1211Q6ZU35 1233 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 ARHGAP27Q6ZUM4 889 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 GPC2Q8N158 579 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 DPF2Q92785 391 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 ALG2Q9H553 416 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 DBNDD1Q9H9R9 158 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 ZDHHC3Q9NYG2 299 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 RAI14Q9P0K7 980 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 ABCF2Q9UG63 623 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 SERPINA10Q9UK55 444 aa6.86□□□□□ -1.31
CDKN3-206ENST00000541304 IQSEC3Q9UPP2 1182 aaPredicted RBP6.86□□□□□ -1.31
CDKN3-206ENST00000541304 MROH7-TTC4A0A0A0MT08 1334 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 GAKO14976 1311 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 CCDC171Q6TFL3 1326 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 USP17L5A8MUK1 530 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 SHISA8B8ZZ34 492 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 BACH1O14867 736 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 SGSM2O43147 1006 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 NCOA4Q13772 614 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 C8orf34Q49A92 452 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 ZMYM1Q5SVZ6 1142 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 OLFM4Q6UX06 510 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 ZNF295-AS1Q8N0V1 137 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 GALNT6Q8NCL4 622 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 TEKT1Q969V4 418 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 AIDAQ96BJ3 306 aa6.85□□□□□ -1.31
CDKN3-206ENST00000541304 NSUN4Q96CB9 384 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms