RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 CASP2P42575 452 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 TPD52P55327 224 aaPredicted RBP6.92□□□□□ -1.3
LMO3-225ENST00000541295 MVPQ14764 893 aaKnown RBP6.92□□□□□ -1.3
LMO3-225ENST00000541295 NAA25Q14CX7 972 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 TTC39CQ8N584 583 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 CERKQ8TCT0 537 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 ATP6V1E2Q96A05 226 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 JPH2Q9BR39 696 aaPredicted RBP6.92□□□□□ -1.3
LMO3-225ENST00000541295 CORO1BQ9BR76 489 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 AVENQ9NQS1 362 aaPredicted RBP6.92□□□□□ -1.3
LMO3-225ENST00000541295 DMGDHQ9UI17 866 aaKnown RBP6.92□□□□□ -1.3
LMO3-225ENST00000541295 TRPC6Q9Y210 931 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 ZNF330Q9Y3S2 320 aaPredicted RBP6.92□□□□□ -1.3
LMO3-225ENST00000541295 SPO11Q9Y5K1 396 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 MST1RQ04912 1400 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 NPHP3Q7Z494 1330 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 SEMA3EO15041 775 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 P4HA2O15460 535 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 BNIP1Q12981 228 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 BOLA3Q53S33 107 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 ZNF530Q6P9A1 599 aaPredicted RBP6.92□□□□□ -1.3
LMO3-225ENST00000541295 TADA2BQ86TJ2 420 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 LRRC43Q8N309 656 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 CTAGE1Q96RT6 745 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 TPCN1Q9ULQ1 816 aa6.92□□□□□ -1.3
LMO3-225ENST00000541295 LMTK3Q96Q04 1460 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 GNAT3A8MTJ3 354 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 GTPBP6O43824 516 aaPredicted RBP6.91□□□□□ -1.3
LMO3-225ENST00000541295 MGEA5O60502 916 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 ATXN8OSP0DMR3 200 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 GYS1P13807 737 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 ALOX15P16050 662 aaPredicted RBP6.91□□□□□ -1.3
LMO3-225ENST00000541295 MRPL12P52815 198 aaKnown RBP6.91□□□□□ -1.3
LMO3-225ENST00000541295 BLVRAP53004 296 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 TUBA3CQ13748 450 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 DSTYKQ6XUX3 929 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 BATF3Q9NR55 127 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 DNAAF2Q9NVR5 837 aaKnown RBP6.91□□□□□ -1.3
LMO3-225ENST00000541295 SATB2Q9UPW6 733 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 STRCP1A6NGW2 1772 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 TARSL2A2RTX5 802 aaKnown RBP6.91□□□□□ -1.3
LMO3-225ENST00000541295 CTIFO43310 598 aaKnown RBP6.91□□□□□ -1.3
LMO3-225ENST00000541295 CSPG5O95196 566 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 CYP1A2P05177 515 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 HSPA8P11142 646 aaKnown RBP6.91□□□□□ -1.3
LMO3-225ENST00000541295 CORO7P57737 925 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 AP2B1P63010 937 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 G3BP1Q13283 466 aaKnown RBP eCLIP6.91□□□□□ -1.3
LMO3-225ENST00000541295 SMUG1Q53HV7 270 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 ZNF713Q8N859 430 aaPredicted RBP6.91□□□□□ -1.3
LMO3-225ENST00000541295 SPIRE2Q8WWL2 714 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 ATP6V0A1Q93050 837 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 UTP14AQ9BVJ6 771 aaKnown RBP6.91□□□□□ -1.3
LMO3-225ENST00000541295 FANCFQ9NPI8 374 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 AXIN2Q9Y2T1 843 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 PCDHB15Q9Y5E8 787 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 SQORQ9Y6N5 450 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 LTN1O94822 1766 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 RASA4BC9J798 803 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 SART1O43290 800 aaKnown RBP6.91□□□□□ -1.3
LMO3-225ENST00000541295 AHCYL1O43865 530 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 PPP1R12BO60237 982 aaPredicted RBP6.91□□□□□ -1.3
LMO3-225ENST00000541295 TMOD1P28289 359 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 HOXD11P31277 338 aaPredicted RBP6.91□□□□□ -1.3
LMO3-225ENST00000541295 SPDYCQ5MJ68 293 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 EMC10Q5UCC4 262 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 LILRB2Q8N423 598 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 PDCD7Q8N8D1 485 aaKnown RBP6.91□□□□□ -1.3
LMO3-225ENST00000541295 IQUBQ8NA54 791 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 NACAP1Q9BZK3 213 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 STK39Q9UEW8 545 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 MTUS1Q9ULD2 1270 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 CEP131Q9UPN4 1083 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 PRKAB1Q9Y478 270 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 SLC30A1Q9Y6M5 507 aa6.91□□□□□ -1.3
LMO3-225ENST00000541295 FAM177BA6PVY3 158 aa6.9□□□□□ -1.3
LMO3-225ENST00000541295 CHUKO15111 745 aa6.9□□□□□ -1.3
LMO3-225ENST00000541295 NEMFO60524 1076 aa6.9□□□□□ -1.3
LMO3-225ENST00000541295 SNX2O60749 519 aa6.9□□□□□ -1.3
LMO3-225ENST00000541295 ERLIN2O94905 339 aa6.9□□□□□ -1.3
LMO3-225ENST00000541295 PPP2R5CQ13362 524 aa6.9□□□□□ -1.3
LMO3-225ENST00000541295 LBRQ14739 615 aaKnown RBP6.9□□□□□ -1.3
LMO3-225ENST00000541295 TSHZ3Q63HK5 1081 aa6.9□□□□□ -1.3
LMO3-225ENST00000541295 POTEEQ6S8J3 1075 aa6.9□□□□□ -1.3
LMO3-225ENST00000541295 MPRIPQ6WCQ1 1025 aa6.9□□□□□ -1.3
LMO3-225ENST00000541295 BRSK1Q8TDC3 778 aa6.9□□□□□ -1.3
LMO3-225ENST00000541295 IPCEF1Q8WWN9 437 aaPredicted RBP6.9□□□□□ -1.3
LMO3-225ENST00000541295 MAML1Q92585 1016 aa6.9□□□□□ -1.3
LMO3-225ENST00000541295 SH3KBP1Q96B97 665 aa6.9□□□□□ -1.3
LMO3-225ENST00000541295 NAF1Q96HR8 494 aaKnown RBP6.9□□□□□ -1.3
LMO3-225ENST00000541295 PDRG1Q9NUG6 133 aa6.9□□□□□ -1.3
LMO3-225ENST00000541295 TMED5Q9Y3A6 229 aa6.9□□□□□ -1.3
LMO3-225ENST00000541295 RTL1A6NKG5 1358 aa6.9□□□□□ -1.3
LMO3-225ENST00000541295 KDM2BQ8NHM5 1336 aa6.9□□□□□ -1.31
LMO3-225ENST00000541295 ENO4A6NNW6 628 aa6.9□□□□□ -1.31
LMO3-225ENST00000541295 RPL13P26373 211 aaKnown RBP6.9□□□□□ -1.31
LMO3-225ENST00000541295 ACAP1Q15027 740 aa6.9□□□□□ -1.31
LMO3-225ENST00000541295 NKX1-1Q15270 411 aaPredicted RBP6.9□□□□□ -1.31
LMO3-225ENST00000541295 CCDC121Q6ZUS5 278 aa6.9□□□□□ -1.31
LMO3-225ENST00000541295 BRINP3Q76B58 766 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms