RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 COBLO75128 1261 aa10.84□□□□□ -0.67
CNOT4-212ENST00000541284 CYP2C19P33261 490 aa10.84□□□□□ -0.67
CNOT4-212ENST00000541284 ARHGAP25P42331 645 aa10.84□□□□□ -0.67
CNOT4-212ENST00000541284 LRRC15Q8TF66 581 aa10.84□□□□□ -0.67
CNOT4-212ENST00000541284 FAM84BQ96KN1 310 aaPredicted RBP10.84□□□□□ -0.67
CNOT4-212ENST00000541284 FUT8Q9BYC5 575 aa10.84□□□□□ -0.67
CNOT4-212ENST00000541284 LIMA1Q9UHB6 759 aaKnown RBP10.84□□□□□ -0.67
CNOT4-212ENST00000541284 NARFQ9UHQ1 456 aa10.84□□□□□ -0.67
CNOT4-212ENST00000541284 M0R2N6 131 aa10.84□□□□□ -0.67
CNOT4-212ENST00000541284 TFRCP02786 760 aaKnown RBP10.84□□□□□ -0.67
CNOT4-212ENST00000541284 IGHMBP2P38935 993 aaKnown RBP10.84□□□□□ -0.67
CNOT4-212ENST00000541284 FAM193AP78312 1265 aa10.84□□□□□ -0.67
CNOT4-212ENST00000541284 ZNF174Q15697 407 aa10.84□□□□□ -0.67
CNOT4-212ENST00000541284 CRY2Q49AN0 593 aa10.84□□□□□ -0.67
CNOT4-212ENST00000541284 IRF2BP1Q8IU81 584 aa10.84□□□□□ -0.67
CNOT4-212ENST00000541284 GPR161Q8N6U8 529 aaKnown RBP10.84□□□□□ -0.67
CNOT4-212ENST00000541284 ANKZF1Q9H8Y5 726 aa10.84□□□□□ -0.67
CNOT4-212ENST00000541284 FAM205AQ6ZU69 1335 aa10.84□□□□□ -0.67
CNOT4-212ENST00000541284 ROBO3Q96MS0 1386 aa10.84□□□□□ -0.67
CNOT4-212ENST00000541284 BAZ2BQ9UIF8 2168 aaKnown RBP10.84□□□□□ -0.67
CNOT4-212ENST00000541284 ORC4O43929 436 aa10.83□□□□□ -0.67
CNOT4-212ENST00000541284 DDAH1O94760 285 aa10.83□□□□□ -0.67
CNOT4-212ENST00000541284 PTGDRQ13258 359 aa10.83□□□□□ -0.67
CNOT4-212ENST00000541284 TTC38Q5R3I4 469 aa10.83□□□□□ -0.67
CNOT4-212ENST00000541284 ZNF771Q7L3S4 317 aaPredicted RBP10.83□□□□□ -0.67
CNOT4-212ENST00000541284 IGSF22Q8N9C0 903 aa10.83□□□□□ -0.67
CNOT4-212ENST00000541284 PARD6BQ9BYG5 372 aa10.83□□□□□ -0.67
CNOT4-212ENST00000541284 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.83□□□□□ -0.67
CNOT4-212ENST00000541284 PARP14Q460N5 1801 aa10.83□□□□□ -0.68
CNOT4-212ENST00000541284 ATP8B1O43520 1251 aa10.83□□□□□ -0.68
CNOT4-212ENST00000541284 RPS6KA4O75676 772 aa10.83□□□□□ -0.68
CNOT4-212ENST00000541284 KRT31Q15323 416 aa10.83□□□□□ -0.68
CNOT4-212ENST00000541284 STAMQ92783 540 aa10.83□□□□□ -0.68
CNOT4-212ENST00000541284 NSUN4Q96CB9 384 aaKnown RBP10.83□□□□□ -0.68
CNOT4-212ENST00000541284 NIP7Q9Y221 180 aaKnown RBP eCLIP10.83□□□□□ -0.68
CNOT4-212ENST00000541284 CDK11BP21127 795 aaKnown RBP10.83□□□□□ -0.68
CNOT4-212ENST00000541284 CDC25AP30304 524 aa10.83□□□□□ -0.68
CNOT4-212ENST00000541284 CASP14P31944 242 aa10.83□□□□□ -0.68
CNOT4-212ENST00000541284 IFIT1BQ5T764 474 aaKnown RBP10.83□□□□□ -0.68
CNOT4-212ENST00000541284 FBXO33Q7Z6M2 555 aa10.83□□□□□ -0.68
CNOT4-212ENST00000541284 MNS1Q8NEH6 495 aa10.83□□□□□ -0.68
CNOT4-212ENST00000541284 RABGGTAQ92696 567 aa10.83□□□□□ -0.68
CNOT4-212ENST00000541284 LRRC4BQ9NT99 713 aa10.83□□□□□ -0.68
CNOT4-212ENST00000541284 RBM28Q9NW13 759 aaKnown RBP10.83□□□□□ -0.68
CNOT4-212ENST00000541284 MINPP1Q9UNW1 487 aa10.83□□□□□ -0.68
CNOT4-212ENST00000541284 REXO2Q9Y3B8 237 aaKnown RBP10.83□□□□□ -0.68
CNOT4-212ENST00000541284 SLX4Q8IY92 1834 aa10.83□□□□□ -0.68
CNOT4-212ENST00000541284 ATP6V1AP38606 617 aa10.82□□□□□ -0.68
CNOT4-212ENST00000541284 ERFEQ4G0M1 354 aa10.82□□□□□ -0.68
CNOT4-212ENST00000541284 NAA15Q9BXJ9 866 aaKnown RBP10.82□□□□□ -0.68
CNOT4-212ENST00000541284 MAP2K7O14733 419 aa10.82□□□□□ -0.68
CNOT4-212ENST00000541284 CYP2D6P10635 497 aa10.82□□□□□ -0.68
CNOT4-212ENST00000541284 UBE4AQ14139 1066 aa10.82□□□□□ -0.68
CNOT4-212ENST00000541284 NAALADL2Q58DX5 795 aa10.82□□□□□ -0.68
CNOT4-212ENST00000541284 KLHL10Q6JEL2 608 aa10.82□□□□□ -0.68
CNOT4-212ENST00000541284 TYW1BQ6NUM6 668 aa10.82□□□□□ -0.68
CNOT4-212ENST00000541284 TMCO3Q6UWJ1 677 aa10.82□□□□□ -0.68
CNOT4-212ENST00000541284 BLZF1Q9H2G9 400 aa10.82□□□□□ -0.68
CNOT4-212ENST00000541284 ABCF2Q9UG63 623 aa10.82□□□□□ -0.68
CNOT4-212ENST00000541284 MKRN1Q9UHC7 482 aaKnown RBP10.82□□□□□ -0.68
CNOT4-212ENST00000541284 CTNND2Q9UQB3 1225 aa10.82□□□□□ -0.68
CNOT4-212ENST00000541284 CCDC175P0C221 793 aa10.82□□□□□ -0.68
CNOT4-212ENST00000541284 CREBRFQ8IUR6 639 aa10.82□□□□□ -0.68
CNOT4-212ENST00000541284 DCP1AQ9NPI6 582 aaPredicted RBP10.82□□□□□ -0.68
CNOT4-212ENST00000541284 BSDC1Q9NW68 430 aaPredicted RBP10.82□□□□□ -0.68
CNOT4-212ENST00000541284 USP17L12C9JPN9 530 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 USP17L21D6R901 530 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 PCP11498 1178 aaKnown RBP10.81□□□□□ -0.68
CNOT4-212ENST00000541284 AMPD2Q01433 879 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 PFKFB3Q16875 520 aaPredicted RBP10.81□□□□□ -0.68
CNOT4-212ENST00000541284 TBC1D9BQ66K14 1250 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 CATIPQ7Z7H3 387 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 ACRBPQ8NEB7 543 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 CELF1Q92879 486 aaKnown RBP10.81□□□□□ -0.68
CNOT4-212ENST00000541284 PNKPQ96T60 521 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 RAB21Q9UL25 225 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 TPM1P09493 284 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 TMED8Q6PL24 325 aaPredicted RBP10.81□□□□□ -0.68
CNOT4-212ENST00000541284 MSANTD4Q8NCY6 345 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 GJD4Q96KN9 370 aaPredicted RBP10.81□□□□□ -0.68
CNOT4-212ENST00000541284 LZTFL1Q9NQ48 299 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 ABHD10Q9NUJ1 306 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 RWDD2AQ9UIY3 292 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 H3BQF6 201 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 BMP15O95972 392 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 TXLNAP40222 546 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 USP5P45974 858 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 MECOMQ03112 1051 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 TEX35Q5T0J7 233 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 SRGAP1Q7Z6B7 1085 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 SLC51AQ86UW1 340 aa10.81□□□□□ -0.68
CNOT4-212ENST00000541284 CDC5LQ99459 802 aaKnown RBP10.81□□□□□ -0.68
CNOT4-212ENST00000541284 KLRC4O43908 158 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 CALM1P0DP23 149 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 CALM2P0DP24 149 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 CALM3P0DP25 149 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 SCG2P13521 617 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 PMS1P54277 932 aaKnown RBP10.8□□□□□ -0.68
CNOT4-212ENST00000541284 FAM47AQ5JRC9 791 aa10.8□□□□□ -0.68
CNOT4-212ENST00000541284 CCDC12Q8WUD4 166 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms