RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 TTF2Q9UNY4 1162 aaKnown RBP8.16□□□□□ -1.1
SUDS3-202ENST00000541280 CSADQ9Y600 493 aa8.16□□□□□ -1.1
SUDS3-202ENST00000541280 MST1RQ04912 1400 aa8.15□□□□□ -1.1
SUDS3-202ENST00000541280 YTHDC2Q9H6S0 1430 aaKnown RBP8.15□□□□□ -1.1
SUDS3-202ENST00000541280 NPHP3Q7Z494 1330 aa8.15□□□□□ -1.1
SUDS3-202ENST00000541280 LRFN4Q6PJG9 635 aa8.15□□□□□ -1.1
SUDS3-202ENST00000541280 ZNF574Q6ZN55 896 aaPredicted RBP8.15□□□□□ -1.1
SUDS3-202ENST00000541280 PLAGL2Q9UPG8 496 aa8.15□□□□□ -1.1
SUDS3-202ENST00000541280 RNF114Q9Y508 228 aa8.15□□□□□ -1.1
SUDS3-202ENST00000541280 NRXN1Q9ULB1 1477 aa8.14□□□□□ -1.11
SUDS3-202ENST00000541280 TMEM265A0A087WTH1 108 aa8.14□□□□□ -1.11
SUDS3-202ENST00000541280 LRIG2O94898 1065 aa8.14□□□□□ -1.11
SUDS3-202ENST00000541280 JUNBP17275 347 aaPredicted RBP8.14□□□□□ -1.11
SUDS3-202ENST00000541280 FUT4P22083 530 aa8.14□□□□□ -1.11
SUDS3-202ENST00000541280 CAP2P40123 477 aa8.14□□□□□ -1.11
SUDS3-202ENST00000541280 PTPN11Q06124 597 aaPredicted RBP8.14□□□□□ -1.11
SUDS3-202ENST00000541280 INPP5AQ14642 412 aa8.14□□□□□ -1.11
SUDS3-202ENST00000541280 EAPPQ56P03 285 aaPredicted RBP8.14□□□□□ -1.11
SUDS3-202ENST00000541280 ZNF772Q68DY9 489 aaPredicted RBP8.14□□□□□ -1.11
SUDS3-202ENST00000541280 TTBK2Q6IQ55 1244 aa8.14□□□□□ -1.11
SUDS3-202ENST00000541280 DNAJC14Q6Y2X3 702 aaPredicted RBP8.14□□□□□ -1.11
SUDS3-202ENST00000541280 KRTAP1-3Q8IUG1 177 aa8.14□□□□□ -1.11
SUDS3-202ENST00000541280 ZNF507Q8TCN5 953 aa8.14□□□□□ -1.11
SUDS3-202ENST00000541280 ELMO3Q96BJ8 720 aa8.14□□□□□ -1.11
SUDS3-202ENST00000541280 PRAM1Q96QH2 718 aa8.14□□□□□ -1.11
SUDS3-202ENST00000541280 DUSP9Q99956 384 aaKnown RBP8.14□□□□□ -1.11
SUDS3-202ENST00000541280 GTF2IRD1Q9UHL9 959 aa8.14□□□□□ -1.11
SUDS3-202ENST00000541280 SNX11Q9Y5W9 270 aa8.14□□□□□ -1.11
SUDS3-202ENST00000541280 SNCAIPQ9Y6H5 919 aa8.14□□□□□ -1.11
SUDS3-202ENST00000541280 STRCP1A6NGW2 1772 aa8.14□□□□□ -1.11
SUDS3-202ENST00000541280 C1orf167Q5SNV9 1468 aa8.13□□□□□ -1.11
SUDS3-202ENST00000541280 CD8BP10966 210 aa8.13□□□□□ -1.11
SUDS3-202ENST00000541280 BNIP3Q12983 259 aa8.13□□□□□ -1.11
SUDS3-202ENST00000541280 LCE3BQ5TA77 95 aa8.13□□□□□ -1.11
SUDS3-202ENST00000541280 MEX3CQ5U5Q3 659 aaKnown RBP8.13□□□□□ -1.11
SUDS3-202ENST00000541280 ARMCX6Q7L4S7 300 aa8.13□□□□□ -1.11
SUDS3-202ENST00000541280 NPAS4Q8IUM7 802 aa8.13□□□□□ -1.11
SUDS3-202ENST00000541280 HRASLS5Q96KN8 279 aa8.13□□□□□ -1.11
SUDS3-202ENST00000541280 ORAI2Q96SN7 254 aa8.13□□□□□ -1.11
SUDS3-202ENST00000541280 TACC3Q9Y6A5 838 aa8.13□□□□□ -1.11
SUDS3-202ENST00000541280 CHD2O14647 1828 aaKnown RBP8.13□□□□□ -1.11
SUDS3-202ENST00000541280 EIF3AQ14152 1382 aaKnown RBP8.12□□□□□ -1.11
SUDS3-202ENST00000541280 EOMESO95936 686 aa8.12□□□□□ -1.11
SUDS3-202ENST00000541280 CDC37L1Q7L3B6 337 aa8.12□□□□□ -1.11
SUDS3-202ENST00000541280 HDXQ7Z353 690 aa8.12□□□□□ -1.11
SUDS3-202ENST00000541280 PLPPR2Q96GM1 343 aa8.12□□□□□ -1.11
SUDS3-202ENST00000541280 WNT10AQ9GZT5 417 aa8.12□□□□□ -1.11
SUDS3-202ENST00000541280 PICK1Q9NRD5 415 aa8.12□□□□□ -1.11
SUDS3-202ENST00000541280 NRXN3Q9Y4C0 1643 aa8.11□□□□□ -1.11
SUDS3-202ENST00000541280 KIF1BO60333 1816 aa8.11□□□□□ -1.11
SUDS3-202ENST00000541280 PLCL1Q15111 1095 aa8.11□□□□□ -1.11
SUDS3-202ENST00000541280 CCDC85BQ15834 202 aaPredicted RBP8.11□□□□□ -1.11
SUDS3-202ENST00000541280 ZNF792Q3KQV3 632 aa8.11□□□□□ -1.11
SUDS3-202ENST00000541280 AGMOQ6ZNB7 445 aa8.11□□□□□ -1.11
SUDS3-202ENST00000541280 ASIC4Q96FT7 647 aa8.11□□□□□ -1.11
SUDS3-202ENST00000541280 RNF19AQ9NV58 838 aa8.11□□□□□ -1.11
SUDS3-202ENST00000541280 XRN1Q8IZH2 1706 aaKnown RBP8.1□□□□□ -1.11
SUDS3-202ENST00000541280 PDIA4P13667 645 aaKnown RBP8.1□□□□□ -1.11
SUDS3-202ENST00000541280 ST13P50502 369 aaKnown RBP8.1□□□□□ -1.11
SUDS3-202ENST00000541280 DAB2P98082 770 aa8.1□□□□□ -1.11
SUDS3-202ENST00000541280 SLBPQ14493 270 aaKnown RBP eCLIP8.1□□□□□ -1.11
SUDS3-202ENST00000541280 AOC3Q16853 763 aa8.1□□□□□ -1.11
SUDS3-202ENST00000541280 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.1□□□□□ -1.11
SUDS3-202ENST00000541280 ARHGAP27Q6ZUM4 889 aa8.1□□□□□ -1.11
SUDS3-202ENST00000541280 C22orf34Q6ZV56 151 aa8.1□□□□□ -1.11
SUDS3-202ENST00000541280 SPACA3Q8IXA5 215 aa8.1□□□□□ -1.11
SUDS3-202ENST00000541280 RGS17Q9UGC6 210 aaPredicted RBP8.1□□□□□ -1.11
SUDS3-202ENST00000541280 MAPK8IP1Q9UQF2 711 aa8.1□□□□□ -1.11
SUDS3-202ENST00000541280 PLEKHH1Q9ULM0 1364 aa8.1□□□□□ -1.11
SUDS3-202ENST00000541280 PRAMEF27A3QJZ7 478 aa8.09□□□□□ -1.11
SUDS3-202ENST00000541280 GFRA2O00451 464 aa8.09□□□□□ -1.11
SUDS3-202ENST00000541280 SLITRK5O94991 958 aa8.09□□□□□ -1.11
SUDS3-202ENST00000541280 PAPLNO95428 1278 aa8.09□□□□□ -1.11
SUDS3-202ENST00000541280 LIG3P49916 1009 aa8.09□□□□□ -1.11
SUDS3-202ENST00000541280 SAFB2Q14151 953 aaKnown RBP eCLIP8.09□□□□□ -1.11
SUDS3-202ENST00000541280 WIPI1Q5MNZ9 446 aaPredicted RBP8.09□□□□□ -1.11
SUDS3-202ENST00000541280 KRT28Q7Z3Y7 464 aa8.09□□□□□ -1.11
SUDS3-202ENST00000541280 AEBP1Q8IUX7 1158 aa8.09□□□□□ -1.11
SUDS3-202ENST00000541280 FBRSQ9HAH7 460 aa8.09□□□□□ -1.11
SUDS3-202ENST00000541280 ASXL1Q8IXJ9 1541 aa8.08□□□□□ -1.12
SUDS3-202ENST00000541280 AHDC1Q5TGY3 1603 aaPredicted RBP8.08□□□□□ -1.12
SUDS3-202ENST00000541280 CLCN7P51798 805 aa8.08□□□□□ -1.12
SUDS3-202ENST00000541280 NKPD1Q17RQ9 610 aa8.08□□□□□ -1.12
SUDS3-202ENST00000541280 TMC4Q7Z404 712 aa8.08□□□□□ -1.12
SUDS3-202ENST00000541280 FBXO33Q7Z6M2 555 aa8.08□□□□□ -1.12
SUDS3-202ENST00000541280 MFSD2AQ8NA29 543 aa8.08□□□□□ -1.12
SUDS3-202ENST00000541280 DDX17Q92841 729 aaKnown RBP8.08□□□□□ -1.12
SUDS3-202ENST00000541280 NOC4LQ9BVI4 516 aaKnown RBP8.08□□□□□ -1.12
SUDS3-202ENST00000541280 FOXQ1Q9C009 403 aa8.08□□□□□ -1.12
SUDS3-202ENST00000541280 MBNL3Q9NUK0 354 aaKnown RBP8.08□□□□□ -1.12
SUDS3-202ENST00000541280 PARP2Q9UGN5 583 aa8.08□□□□□ -1.12
SUDS3-202ENST00000541280 DLC1Q96QB1 1528 aa8.08□□□□□ -1.12
SUDS3-202ENST00000541280 ROBO1Q9Y6N7 1651 aa8.08□□□□□ -1.12
SUDS3-202ENST00000541280 MED1Q15648 1581 aaPredicted RBP8.07□□□□□ -1.12
SUDS3-202ENST00000541280 ANKARQ7Z5J8 1434 aa8.07□□□□□ -1.12
SUDS3-202ENST00000541280 RLBP1P12271 317 aa8.07□□□□□ -1.12
SUDS3-202ENST00000541280 ITIH2P19823 946 aa8.07□□□□□ -1.12
SUDS3-202ENST00000541280 ANGEL2Q5VTE6 544 aaKnown RBP8.07□□□□□ -1.12
SUDS3-202ENST00000541280 ATG4DQ86TL0 474 aaPredicted RBP8.07□□□□□ -1.12
SUDS3-202ENST00000541280 HID1Q8IV36 788 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms