RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 ERVK-24P63145 666 aa8.91□□□□□ -0.98
TTR-203ENST00000541025 ATP2B2Q01814 1243 aa8.91□□□□□ -0.98
TTR-203ENST00000541025 SCARA3Q6AZY7 606 aa8.91□□□□□ -0.98
TTR-203ENST00000541025 STK11IPQ8N1F8 1099 aa8.91□□□□□ -0.98
TTR-203ENST00000541025 RNF214Q8ND24 703 aa8.91□□□□□ -0.98
TTR-203ENST00000541025 OSBPL7Q9BZF2 842 aa8.91□□□□□ -0.98
TTR-203ENST00000541025 CBX8Q9HC52 389 aa8.91□□□□□ -0.98
TTR-203ENST00000541025 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.91□□□□□ -0.98
TTR-203ENST00000541025 SBNO1A3KN83 1393 aa8.9□□□□□ -0.98
TTR-203ENST00000541025 POLR3AO14802 1390 aaPredicted RBP8.9□□□□□ -0.98
TTR-203ENST00000541025 SBNO2Q9Y2G9 1366 aa8.9□□□□□ -0.98
TTR-203ENST00000541025 FAM87AP0C7U9 286 aa8.9□□□□□ -0.98
TTR-203ENST00000541025 HCLS1P14317 486 aaPredicted RBP8.9□□□□□ -0.98
TTR-203ENST00000541025 CDK5R2Q13319 367 aa8.9□□□□□ -0.98
TTR-203ENST00000541025 GPBAR1Q8TDU6 330 aa8.9□□□□□ -0.98
TTR-203ENST00000541025 MISP3Q96FF7 219 aa8.9□□□□□ -0.98
TTR-203ENST00000541025 FRMD6Q96NE9 622 aa8.9□□□□□ -0.98
TTR-203ENST00000541025 KRTAP4-12Q9BQ66 201 aa8.9□□□□□ -0.98
TTR-203ENST00000541025 SSU72Q9NP77 194 aaKnown RBP8.9□□□□□ -0.98
TTR-203ENST00000541025 SPG7Q9UQ90 795 aa8.9□□□□□ -0.98
TTR-203ENST00000541025 NRAPQ86VF7 1730 aa8.9□□□□□ -0.98
TTR-203ENST00000541025 MYOM1P52179 1685 aa8.9□□□□□ -0.98
TTR-203ENST00000541025 NWD2Q9ULI1 1742 aa8.89□□□□□ -0.99
TTR-203ENST00000541025 TRIM37O94972 964 aa8.89□□□□□ -0.99
TTR-203ENST00000541025 LRRC14Q15048 493 aa8.89□□□□□ -0.99
TTR-203ENST00000541025 TPTE2Q6XPS3 522 aa8.89□□□□□ -0.99
TTR-203ENST00000541025 FLCNQ8NFG4 579 aa8.89□□□□□ -0.99
TTR-203ENST00000541025 GOLGA2P5Q9HBQ8 144 aa8.89□□□□□ -0.99
TTR-203ENST00000541025 SLC5A6Q9Y289 635 aa8.89□□□□□ -0.99
TTR-203ENST00000541025 RNF114Q9Y508 228 aa8.89□□□□□ -0.99
TTR-203ENST00000541025 ACEP12821 1306 aa8.88□□□□□ -0.99
TTR-203ENST00000541025 EVC2Q86UK5 1308 aa8.88□□□□□ -0.99
TTR-203ENST00000541025 ENC1O14682 589 aa8.88□□□□□ -0.99
TTR-203ENST00000541025 MEX3CQ5U5Q3 659 aaKnown RBP8.88□□□□□ -0.99
TTR-203ENST00000541025 CBLL1Q75N03 491 aa8.88□□□□□ -0.99
TTR-203ENST00000541025 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.88□□□□□ -0.99
TTR-203ENST00000541025 NGDNQ8NEJ9 315 aaKnown RBP8.88□□□□□ -0.99
TTR-203ENST00000541025 ACSBG1Q96GR2 724 aa8.88□□□□□ -0.99
TTR-203ENST00000541025 MKNK2Q9HBH9 465 aa8.88□□□□□ -0.99
TTR-203ENST00000541025 PAK6Q9NQU5 681 aaPredicted RBP8.88□□□□□ -0.99
TTR-203ENST00000541025 WWC3Q9ULE0 1092 aa8.88□□□□□ -0.99
TTR-203ENST00000541025 RGPD5Q99666 1765 aa8.88□□□□□ -0.99
TTR-203ENST00000541025 USP47Q96K76 1375 aa8.87□□□□□ -0.99
TTR-203ENST00000541025 COL14A1Q05707 1796 aaKnown RBP8.87□□□□□ -0.99
TTR-203ENST00000541025 ST20-MTHFSA0A0A6YYL1 179 aa8.87□□□□□ -0.99
TTR-203ENST00000541025 NEFMP07197 916 aa8.87□□□□□ -0.99
TTR-203ENST00000541025 NETO1Q8TDF5 533 aa8.87□□□□□ -0.99
TTR-203ENST00000541025 BCL7CQ8WUZ0 217 aaPredicted RBP8.87□□□□□ -0.99
TTR-203ENST00000541025 ISL2Q96A47 359 aa8.87□□□□□ -0.99
TTR-203ENST00000541025 C8orf37Q96NL8 207 aa8.87□□□□□ -0.99
TTR-203ENST00000541025 TESK2Q96S53 571 aa8.87□□□□□ -0.99
TTR-203ENST00000541025 CYP8B1Q9UNU6 501 aa8.87□□□□□ -0.99
TTR-203ENST00000541025 CD163L1Q9NR16 1453 aa8.87□□□□□ -0.99
TTR-203ENST00000541025 USP54Q70EL1 1684 aa8.87□□□□□ -0.99
TTR-203ENST00000541025 ARHGEF10O15013 1369 aa8.86□□□□□ -0.99
TTR-203ENST00000541025 AFF2P51816 1311 aa8.86□□□□□ -0.99
TTR-203ENST00000541025 SETDB2Q96T68 719 aa8.86□□□□□ -0.99
TTR-203ENST00000541025 DUSP23Q9BVJ7 150 aa8.86□□□□□ -0.99
TTR-203ENST00000541025 C12orf49Q9H741 205 aa8.86□□□□□ -0.99
TTR-203ENST00000541025 FAM8A1Q9UBU6 413 aa8.86□□□□□ -0.99
TTR-203ENST00000541025 BRWD3Q6RI45 1802 aa8.86□□□□□ -0.99
TTR-203ENST00000541025 USP6P35125 1406 aa8.86□□□□□ -0.99
TTR-203ENST00000541025 SSH2Q76I76 1423 aa8.86□□□□□ -0.99
TTR-203ENST00000541025 KIF20BQ96Q89 1820 aa8.85□□□□□ -0.99
TTR-203ENST00000541025 LLGL2Q6P1M3 1020 aa8.85□□□□□ -0.99
TTR-203ENST00000541025 GRIN3AQ8TCU5 1115 aa8.85□□□□□ -0.99
TTR-203ENST00000541025 VAV3Q9UKW4 847 aa8.85□□□□□ -0.99
TTR-203ENST00000541025 LTN1O94822 1766 aa8.85□□□□□ -0.99
TTR-203ENST00000541025 BCL9LQ86UU0 1499 aa8.84□□□□□ -0.99
TTR-203ENST00000541025 FANCGO15287 622 aa8.84□□□□□ -0.99
TTR-203ENST00000541025 PAGE1O75459 146 aa8.84□□□□□ -0.99
TTR-203ENST00000541025 GLI3P10071 1580 aa8.84□□□□□ -0.99
TTR-203ENST00000541025 RING1Q06587 406 aa8.84□□□□□ -0.99
TTR-203ENST00000541025 CPSF1Q10570 1443 aaKnown RBP8.84□□□□□ -0.99
TTR-203ENST00000541025 COL19A1Q14993 1142 aa8.84□□□□□ -0.99
TTR-203ENST00000541025 MPRIPQ6WCQ1 1025 aa8.84□□□□□ -0.99
TTR-203ENST00000541025 SND1Q7KZF4 910 aaKnown RBP eCLIP8.84□□□□□ -0.992e-11■■■■■ 51
TTR-203ENST00000541025 LMO7Q8WWI1 1683 aa8.84□□□□□ -0.99
TTR-203ENST00000541025 SLIT2O94813 1529 aa8.84□□□□□ -0.99
TTR-203ENST00000541025 COL18A1P39060 1754 aa8.84□□□□□ -1
TTR-203ENST00000541025 LEFTY1O75610 366 aa8.83□□□□□ -1
TTR-203ENST00000541025 JUNBP17275 347 aaPredicted RBP8.83□□□□□ -1
TTR-203ENST00000541025 FGD1P98174 961 aa8.83□□□□□ -1
TTR-203ENST00000541025 PRKCQQ04759 706 aa8.83□□□□□ -1
TTR-203ENST00000541025 GZF1Q9H116 711 aaPredicted RBP8.83□□□□□ -1
TTR-203ENST00000541025 SLIT3O75094 1523 aa8.83□□□□□ -1
TTR-203ENST00000541025 LDHBP07195 334 aaKnown RBP8.82□□□□□ -1
TTR-203ENST00000541025 P4HBP07237 508 aaKnown RBP8.82□□□□□ -1
TTR-203ENST00000541025 PPM1JQ5JR12 505 aa8.82□□□□□ -1
TTR-203ENST00000541025 ARHGAP27Q6ZUM4 889 aa8.82□□□□□ -1
TTR-203ENST00000541025 SV2BQ7L1I2 683 aa8.82□□□□□ -1
TTR-203ENST00000541025 SPRED2Q7Z698 418 aa8.82□□□□□ -1
TTR-203ENST00000541025 C12orf40Q86WS4 652 aa8.82□□□□□ -1
TTR-203ENST00000541025 PLD6Q8N2A8 252 aaKnown RBP8.82□□□□□ -1
TTR-203ENST00000541025 FAM181AQ8N9Y4 354 aa8.82□□□□□ -1
TTR-203ENST00000541025 KCT2Q8NC54 265 aa8.82□□□□□ -1
TTR-203ENST00000541025 ASIC4Q96FT7 647 aa8.82□□□□□ -1
TTR-203ENST00000541025 PICK1Q9NRD5 415 aa8.82□□□□□ -1
TTR-203ENST00000541025 ATRNO75882 1429 aa8.81□□□□□ -1
TTR-203ENST00000541025 TMEM265A0A087WTH1 108 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms