RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 NKX2-3Q8TAU0 364 aa10.9□□□□□ -0.66
SNHG1-215ENST00000540904 RAET1EQ8TD07 263 aa10.9□□□□□ -0.66
SNHG1-215ENST00000540904 ESR2Q92731 530 aa10.9□□□□□ -0.66
SNHG1-215ENST00000540904 CHMP4CQ96CF2 233 aa10.9□□□□□ -0.66
SNHG1-215ENST00000540904 ATG4CQ96DT6 458 aa10.9□□□□□ -0.66
SNHG1-215ENST00000540904 FBXO28Q9NVF7 368 aa10.9□□□□□ -0.66
SNHG1-215ENST00000540904 BTBD7Q9P203 1132 aa10.9□□□□□ -0.66
SNHG1-215ENST00000540904 ISY1Q9ULR0 285 aaKnown RBP10.9□□□□□ -0.66
SNHG1-215ENST00000540904 SYNPO2Q9UMS6 1093 aa10.9□□□□□ -0.66
SNHG1-215ENST00000540904 GABRQQ9UN88 632 aa10.9□□□□□ -0.66
SNHG1-215ENST00000540904 RABGAP1Q9Y3P9 1069 aa10.9□□□□□ -0.66
SNHG1-215ENST00000540904 MYH8P13535 1937 aa10.9□□□□□ -0.67
SNHG1-215ENST00000540904 B4E1Z4 1266 aa10.89□□□□□ -0.67
SNHG1-215ENST00000540904 KDM4AO75164 1064 aa10.89□□□□□ -0.67
SNHG1-215ENST00000540904 MAPK4P31152 587 aa10.89□□□□□ -0.67
SNHG1-215ENST00000540904 FLT3LGP49771 235 aa10.89□□□□□ -0.67
SNHG1-215ENST00000540904 CCNA1P78396 465 aa10.89□□□□□ -0.67
SNHG1-215ENST00000540904 PLS1Q14651 629 aa10.89□□□□□ -0.67
SNHG1-215ENST00000540904 WDR78Q5VTH9 848 aa10.89□□□□□ -0.67
SNHG1-215ENST00000540904 SLFN13Q68D06 897 aa10.89□□□□□ -0.67
SNHG1-215ENST00000540904 CASC1Q6TDU7 716 aa10.89□□□□□ -0.67
SNHG1-215ENST00000540904 SH3TC2Q8TF17 1288 aa10.89□□□□□ -0.67
SNHG1-215ENST00000540904 ESYT1Q9BSJ8 1104 aa10.89□□□□□ -0.67
SNHG1-215ENST00000540904 PORCNQ9H237 461 aa10.89□□□□□ -0.67
SNHG1-215ENST00000540904 CWC22Q9HCG8 908 aaKnown RBP10.89□□□□□ -0.67
SNHG1-215ENST00000540904 MTMR7Q9Y216 660 aa10.89□□□□□ -0.67
SNHG1-215ENST00000540904 ZSWIM8A7E2V4 1837 aa10.88□□□□□ -0.67
SNHG1-215ENST00000540904 MCCP23508 829 aa10.88□□□□□ -0.67
SNHG1-215ENST00000540904 SLC1A4P43007 532 aa10.88□□□□□ -0.67
SNHG1-215ENST00000540904 FXR2P51116 673 aaKnown RBP eCLIP10.88□□□□□ -0.67
SNHG1-215ENST00000540904 NBPF11Q86T75 865 aa10.88□□□□□ -0.67
SNHG1-215ENST00000540904 MB21D1Q8N884 522 aa10.88□□□□□ -0.67
SNHG1-215ENST00000540904 MAP4K1Q92918 833 aa10.88□□□□□ -0.67
SNHG1-215ENST00000540904 SLF1Q9BQI6 1058 aa10.88□□□□□ -0.67
SNHG1-215ENST00000540904 ZKSCAN3Q9BRR0 538 aa10.88□□□□□ -0.67
SNHG1-215ENST00000540904 SPATC1LQ9H0A9 340 aa10.88□□□□□ -0.67
SNHG1-215ENST00000540904 CNNM2Q9H8M5 875 aa10.88□□□□□ -0.67
SNHG1-215ENST00000540904 ANO2Q9NQ90 1003 aa10.88□□□□□ -0.67
SNHG1-215ENST00000540904 TCP11L1Q9NUJ3 509 aa10.88□□□□□ -0.67
SNHG1-215ENST00000540904 ZSWIM5Q9P217 1185 aa10.88□□□□□ -0.67
SNHG1-215ENST00000540904 PPP1R9AQ9ULJ8 1098 aa10.88□□□□□ -0.67
SNHG1-215ENST00000540904 GREB1LQ9C091 1923 aaPredicted RBP10.88□□□□□ -0.67
SNHG1-215ENST00000540904 VWA5AO00534 786 aa10.87□□□□□ -0.67
SNHG1-215ENST00000540904 CDC45O75419 566 aa10.87□□□□□ -0.67
SNHG1-215ENST00000540904 MYCP01106 439 aaPredicted RBP10.87□□□□□ -0.67
SNHG1-215ENST00000540904 CYP21A2P08686 494 aa10.87□□□□□ -0.67
SNHG1-215ENST00000540904 TOP1P11387 765 aaKnown RBP10.87□□□□□ -0.67
SNHG1-215ENST00000540904 BMP3P12645 472 aa10.87□□□□□ -0.67
SNHG1-215ENST00000540904 GRK4P32298 578 aa10.87□□□□□ -0.67
SNHG1-215ENST00000540904 NOVP48745 357 aa10.87□□□□□ -0.67
SNHG1-215ENST00000540904 SOX10P56693 466 aa10.87□□□□□ -0.67
SNHG1-215ENST00000540904 IKQ13123 557 aaPredicted RBP10.87□□□□□ -0.67
SNHG1-215ENST00000540904 GPR142Q7Z601 462 aa10.87□□□□□ -0.67
SNHG1-215ENST00000540904 PLEKHH3Q7Z736 793 aa10.87□□□□□ -0.67
SNHG1-215ENST00000540904 IQCA1Q86XH1 822 aa10.87□□□□□ -0.67
SNHG1-215ENST00000540904 PRPF38AQ8NAV1 312 aaKnown RBP10.87□□□□□ -0.67
SNHG1-215ENST00000540904 KIFC2Q96AC6 838 aa10.87□□□□□ -0.67
SNHG1-215ENST00000540904 ARMC5Q96C12 935 aa10.87□□□□□ -0.67
SNHG1-215ENST00000540904 GMCL1Q96IK5 515 aa10.87□□□□□ -0.67
SNHG1-215ENST00000540904 TMEM47Q9BQJ4 181 aa10.87□□□□□ -0.67
SNHG1-215ENST00000540904 MOV10L1Q9BXT6 1211 aaKnown RBP10.87□□□□□ -0.67
SNHG1-215ENST00000540904 KRT23Q9C075 422 aa10.87□□□□□ -0.67
SNHG1-215ENST00000540904 LSG1Q9H089 658 aaKnown RBP10.87□□□□□ -0.67
SNHG1-215ENST00000540904 BIN2Q9UBW5 565 aaPredicted RBP10.87□□□□□ -0.67
SNHG1-215ENST00000540904 FEM1BQ9UK73 627 aa10.87□□□□□ -0.67
SNHG1-215ENST00000540904 RBM8AQ9Y5S9 174 aaKnown RBP10.87□□□□□ -0.67
SNHG1-215ENST00000540904 TMEM232C9JQI7 657 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 ADCY3O60266 1144 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 ATXN8OSP0DMR3 200 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 ELNP15502 786 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 NT5C2P49902 561 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 TRDNQ13061 729 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 IRF5Q13568 498 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 TMEM132BQ14DG7 1078 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 CCDC96Q2M329 555 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 RCSD1Q6JBY9 416 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 KCTD1Q719H9 257 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 RASGRP2Q7LDG7 609 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 NCAPG2Q86XI2 1143 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 SLAIN1Q8ND83 568 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 SOCS4Q8WXH5 440 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 ZNF333Q96JL9 665 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 TTC14Q96N46 770 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 ZSCAN10Q96SZ4 725 aaPredicted RBP10.86□□□□□ -0.67
SNHG1-215ENST00000540904 NUDT12Q9BQG2 462 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 UBAC1Q9BSL1 405 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 GJD2Q9UKL4 321 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 ADAMTS5Q9UNA0 930 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 CTDP1Q9Y5B0 961 aaPredicted RBP10.86□□□□□ -0.67
SNHG1-215ENST00000540904 TAF6LQ9Y6J9 622 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 IVNS1ABPQ9Y6Y0 642 aa10.86□□□□□ -0.67
SNHG1-215ENST00000540904 E7EWF7 191 aa10.85□□□□□ -0.67
SNHG1-215ENST00000540904 ZBED4O75132 1171 aa10.85□□□□□ -0.67
SNHG1-215ENST00000540904 ERCC3P19447 782 aa10.85□□□□□ -0.67
SNHG1-215ENST00000540904 CYP2B6P20813 491 aa10.85□□□□□ -0.67
SNHG1-215ENST00000540904 STAT2P52630 851 aa10.85□□□□□ -0.67
SNHG1-215ENST00000540904 CCDC178Q5BJE1 867 aa10.85□□□□□ -0.67
SNHG1-215ENST00000540904 RALYLQ86SE5 291 aaKnown RBP10.85□□□□□ -0.67
SNHG1-215ENST00000540904 DGKHQ86XP1 1220 aa10.85□□□□□ -0.67
SNHG1-215ENST00000540904 CHURC1Q8WUH1 139 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms