RNA–Protein interactions for RNA: ENST00000540898.1

FOXO3-203, Transcript of forkhead box O3, humanhuman

TSL 1 (best) BASIC

Gene FOXO3, Length 2,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXO3-203ENST00000540898 CLIP2Q9UDT6 1046 aa11.73□□□□□ -0.53
FOXO3-203ENST00000540898 TCP10L2B9ZVM9 353 aa11.73□□□□□ -0.53
FOXO3-203ENST00000540898 KLRF2D3W0D1 207 aa11.73□□□□□ -0.53
FOXO3-203ENST00000540898 RAD21O60216 631 aa11.73□□□□□ -0.53
FOXO3-203ENST00000540898 SCG2P13521 617 aa11.73□□□□□ -0.53
FOXO3-203ENST00000540898 PRELPP51888 382 aa11.73□□□□□ -0.53
FOXO3-203ENST00000540898 RCAN1P53805 252 aa11.73□□□□□ -0.53
FOXO3-203ENST00000540898 PLCB2Q00722 1185 aa11.73□□□□□ -0.53
FOXO3-203ENST00000540898 ANO6Q4KMQ2 910 aa11.73□□□□□ -0.53
FOXO3-203ENST00000540898 WWC2Q6AWC2 1192 aa11.73□□□□□ -0.53
FOXO3-203ENST00000540898 TTBK2Q6IQ55 1244 aa11.73□□□□□ -0.53
FOXO3-203ENST00000540898 C11orf57Q6ZUT1 292 aaPredicted RBP11.73□□□□□ -0.53
FOXO3-203ENST00000540898 MRPS27Q92552 414 aaKnown RBP11.73□□□□□ -0.53
FOXO3-203ENST00000540898 TNFRSF25Q93038 417 aa11.73□□□□□ -0.53
FOXO3-203ENST00000540898 RBM28Q9NW13 759 aaKnown RBP11.73□□□□□ -0.53
FOXO3-203ENST00000540898 MYH8P13535 1937 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 PALM3A6NDB9 673 aaPredicted RBP11.72□□□□□ -0.53
FOXO3-203ENST00000540898 BIN1O00499 593 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 YEATS4O95619 227 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 SLC16A2P36021 539 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 FAM160A1Q05DH4 1040 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 ZNF174Q15697 407 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 CCDC93Q567U6 631 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 HEATR3Q7Z4Q2 680 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 ANKS1AQ92625 1134 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 GPCPD1Q9NPB8 672 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 MTMR4Q9NYA4 1195 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 SUGT1Q9Y2Z0 365 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 CALM1P0DP23 149 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 CALM2P0DP24 149 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 CALM3P0DP25 149 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 IRX5P78411 483 aaPredicted RBP11.72□□□□□ -0.53
FOXO3-203ENST00000540898 PFKFB3Q16875 520 aaPredicted RBP11.72□□□□□ -0.53
FOXO3-203ENST00000540898 TMED8Q6PL24 325 aaPredicted RBP11.72□□□□□ -0.53
FOXO3-203ENST00000540898 CCDC73Q6ZRK6 1079 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 PIK3AP1Q6ZUJ8 805 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 C17orf53Q8N3J3 647 aaPredicted RBP11.72□□□□□ -0.53
FOXO3-203ENST00000540898 WASF1Q92558 559 aa11.72□□□□□ -0.53
FOXO3-203ENST00000540898 DDX19AQ9NUU7 478 aaKnown RBP11.72□□□□□ -0.53
FOXO3-203ENST00000540898 SAFBQ15424 915 aaKnown RBP eCLIP11.71□□□□□ -0.53
FOXO3-203ENST00000540898 NLGN2Q8NFZ4 835 aa11.71□□□□□ -0.53
FOXO3-203ENST00000540898 KCNG4Q8TDN1 519 aa11.71□□□□□ -0.53
FOXO3-203ENST00000540898 PIGSQ96S52 555 aa11.71□□□□□ -0.53
FOXO3-203ENST00000540898 TCP11L1Q9NUJ3 509 aa11.71□□□□□ -0.53
FOXO3-203ENST00000540898 KRT2P35908 639 aa11.71□□□□□ -0.54
FOXO3-203ENST00000540898 NLRP5P59047 1200 aa11.71□□□□□ -0.54
FOXO3-203ENST00000540898 RASSF7Q02833 373 aa11.71□□□□□ -0.54
FOXO3-203ENST00000540898 MAPK8IP2Q13387 824 aaPredicted RBP11.71□□□□□ -0.54
FOXO3-203ENST00000540898 RBM43Q6ZSC3 357 aaKnown RBP11.71□□□□□ -0.54
FOXO3-203ENST00000540898 KCTD1Q719H9 257 aa11.71□□□□□ -0.54
FOXO3-203ENST00000540898 GRAMD1CQ8IYS0 662 aa11.71□□□□□ -0.54
FOXO3-203ENST00000540898 PDILTQ8N807 584 aa11.71□□□□□ -0.54
FOXO3-203ENST00000540898 FOXP1Q9H334 677 aaPredicted RBP11.71□□□□□ -0.54
FOXO3-203ENST00000540898 ASTN2O75129 1339 aaPredicted RBP11.7□□□□□ -0.54
FOXO3-203ENST00000540898 IGKV6D-41A0A0C4DH26 115 aa11.7□□□□□ -0.54
FOXO3-203ENST00000540898 NFKBIEO00221 500 aa11.7□□□□□ -0.54
FOXO3-203ENST00000540898 KINO60870 393 aaKnown RBP11.7□□□□□ -0.54
FOXO3-203ENST00000540898 ZNF202O95125 648 aa11.7□□□□□ -0.54
FOXO3-203ENST00000540898 PDHBP11177 359 aa11.7□□□□□ -0.54
FOXO3-203ENST00000540898 SNAP25P60880 206 aa11.7□□□□□ -0.54
FOXO3-203ENST00000540898 CCDC84Q86UT8 332 aaPredicted RBP11.7□□□□□ -0.54
FOXO3-203ENST00000540898 SIAH1Q8IUQ4 282 aa11.7□□□□□ -0.54
FOXO3-203ENST00000540898 NUP88Q99567 741 aaPredicted RBP11.7□□□□□ -0.54
FOXO3-203ENST00000540898 FBXO2Q9UK22 296 aaPredicted RBP11.7□□□□□ -0.54
FOXO3-203ENST00000540898 A0A087X0B3 334 aa11.7□□□□□ -0.54
FOXO3-203ENST00000540898 CDC25AP30304 524 aa11.7□□□□□ -0.54
FOXO3-203ENST00000540898 CXCL9Q07325 125 aa11.7□□□□□ -0.54
FOXO3-203ENST00000540898 SEPT2Q15019 361 aa11.7□□□□□ -0.54
FOXO3-203ENST00000540898 ATL3Q6DD88 541 aa11.7□□□□□ -0.54
FOXO3-203ENST00000540898 GMLQ99445 158 aa11.7□□□□□ -0.54
FOXO3-203ENST00000540898 CBX8Q9HC52 389 aa11.7□□□□□ -0.54
FOXO3-203ENST00000540898 BCS1LQ9Y276 419 aa11.7□□□□□ -0.54
FOXO3-203ENST00000540898 TOP1P11387 765 aaKnown RBP11.69□□□□□ -0.54
FOXO3-203ENST00000540898 CASP1P29466 404 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 KIF5BP33176 963 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 NBPF9Q3BBW0 867 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 LONRF3Q496Y0 759 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 RSBN1LQ6PCB5 846 aaPredicted RBP11.69□□□□□ -0.54
FOXO3-203ENST00000540898 ANKRD7Q92527 254 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 COA7Q96BR5 231 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 EPSTI1Q96J88 318 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 A0A1W2PQ27 194 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 A0A1W2PQ64 194 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 A0A1W2PQD8 194 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 STXBP3O00186 592 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 PARP1P09874 1014 aaKnown RBP11.69□□□□□ -0.54
FOXO3-203ENST00000540898 CCDC192P0DO97 292 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 PNOCQ13519 176 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 IL17AQ16552 155 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 RBM26Q5T8P6 1007 aaKnown RBP11.69□□□□□ -0.54
FOXO3-203ENST00000540898 UIMC1Q96RL1 719 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 SDF4Q9BRK5 362 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 TMEM39BQ9GZU3 492 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 CSRNP2Q9H175 543 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 VEZTQ9HBM0 779 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 PIM2Q9P1W9 311 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 SERPINA10Q9UK55 444 aa11.69□□□□□ -0.54
FOXO3-203ENST00000540898 SPDYE2BA6NHP3 402 aa11.68□□□□□ -0.54
FOXO3-203ENST00000540898 PPP1R11O60927 126 aaPredicted RBP11.68□□□□□ -0.54
FOXO3-203ENST00000540898 SPDYE6P0CI01 402 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms