RNA–Protein interactions for RNA: ENST00000540768.5

NUP85-203, Transcript of nucleoporin 85, humanhuman

TSL 2 BASIC

Gene NUP85, Length 1,926 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-203ENST00000540768 DYNLL2Q96FJ2 89 aa11.29□□□□□ -0.6
NUP85-203ENST00000540768 CCDC94Q9BW85 323 aaPredicted RBP11.29□□□□□ -0.6
NUP85-203ENST00000540768 NRDCO43847 1150 aa11.28□□□□□ -0.6
NUP85-203ENST00000540768 USP5P45974 858 aa11.28□□□□□ -0.6
NUP85-203ENST00000540768 GSTO1P78417 241 aa11.28□□□□□ -0.6
NUP85-203ENST00000540768 GRM4Q14833 912 aa11.28□□□□□ -0.6
NUP85-203ENST00000540768 E2F4Q16254 413 aa11.28□□□□□ -0.6
NUP85-203ENST00000540768 IL17AQ16552 155 aa11.28□□□□□ -0.6
NUP85-203ENST00000540768 PIK3AP1Q6ZUJ8 805 aa11.28□□□□□ -0.6
NUP85-203ENST00000540768 TMEM139Q8IV31 216 aa11.28□□□□□ -0.6
NUP85-203ENST00000540768 TRMT44Q8IYL2 757 aaKnown RBP11.28□□□□□ -0.6
NUP85-203ENST00000540768 KIF18AQ8NI77 898 aa11.28□□□□□ -0.6
NUP85-203ENST00000540768 KAT14Q9H8E8 782 aa11.28□□□□□ -0.6
NUP85-203ENST00000540768 SH3GLB2Q9NR46 395 aa11.28□□□□□ -0.6
NUP85-203ENST00000540768 TCP11L1Q9NUJ3 509 aa11.28□□□□□ -0.6
NUP85-203ENST00000540768 VWA3AA6NCI4 1184 aa11.27□□□□□ -0.6
NUP85-203ENST00000540768 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.6
NUP85-203ENST00000540768 AFMP43652 599 aa11.27□□□□□ -0.6
NUP85-203ENST00000540768 CUL4BQ13620 913 aa11.27□□□□□ -0.6
NUP85-203ENST00000540768 DIXDC1Q155Q3 683 aa11.27□□□□□ -0.6
NUP85-203ENST00000540768 PTPN21Q16825 1174 aa11.27□□□□□ -0.6
NUP85-203ENST00000540768 SLC35G1Q2M3R5 365 aa11.27□□□□□ -0.6
NUP85-203ENST00000540768 SLC4A8Q2Y0W8 1093 aa11.27□□□□□ -0.6
NUP85-203ENST00000540768 C4orf32Q8N8J7 132 aa11.27□□□□□ -0.6
NUP85-203ENST00000540768 CNBD1Q8NA66 436 aa11.27□□□□□ -0.6
NUP85-203ENST00000540768 PNMA1Q8ND90 353 aa11.27□□□□□ -0.6
NUP85-203ENST00000540768 CCDC34Q96HJ3 373 aa11.27□□□□□ -0.6
NUP85-203ENST00000540768 GSDMAQ96QA5 445 aa11.27□□□□□ -0.6
NUP85-203ENST00000540768 SAMSN1Q9NSI8 373 aaKnown RBP11.27□□□□□ -0.6
NUP85-203ENST00000540768 MAD2L2Q9UI95 211 aa11.27□□□□□ -0.6
NUP85-203ENST00000540768 M0R2N6 131 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 NPHP1O15259 732 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 BAG3O95817 575 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 TUBB4AP04350 444 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 CALML3P27482 149 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 CASP1P29466 404 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 GPSM2P81274 684 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 GOLGA8FQ08AF8 430 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 GOLGA8DPQ0D2H9 430 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 NAA30Q147X3 362 aaPredicted RBP11.27□□□□□ -0.61
NUP85-203ENST00000540768 NR1I3Q14994 352 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 GLIPR1L2Q4G1C9 344 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 HSP90AA4PQ58FG1 418 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 CCDC178Q5BJE1 867 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 PRR5LQ6MZQ0 368 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 APTXQ7Z2E3 356 aaKnown RBP11.27□□□□□ -0.61
NUP85-203ENST00000540768 ZNF804AQ7Z570 1209 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 STAG2Q8N3U4 1231 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 PDCL2Q8N4E4 241 aa11.27□□□□□ -0.61
NUP85-203ENST00000540768 GPR101Q96P66 508 aaPredicted RBP11.27□□□□□ -0.61
NUP85-203ENST00000540768 RTFDC1Q9BY42 306 aaPredicted RBP11.27□□□□□ -0.61
NUP85-203ENST00000540768 FAM205AQ6ZU69 1335 aa11.26□□□□□ -0.61
NUP85-203ENST00000540768 USP17L3A6NCW0 530 aa11.26□□□□□ -0.61
NUP85-203ENST00000540768 USP17L4A6NCW7 530 aa11.26□□□□□ -0.61
NUP85-203ENST00000540768 PPP1R3GB7ZBB8 358 aa11.26□□□□□ -0.61
NUP85-203ENST00000540768 CCP110O43303 1012 aa11.26□□□□□ -0.61
NUP85-203ENST00000540768 CDK11BP21127 795 aaKnown RBP11.26□□□□□ -0.61
NUP85-203ENST00000540768 CRY2Q49AN0 593 aa11.26□□□□□ -0.61
NUP85-203ENST00000540768 SPATA1Q5VX52 437 aa11.26□□□□□ -0.61
NUP85-203ENST00000540768 PDXDC2PQ6P474 469 aa11.26□□□□□ -0.61
NUP85-203ENST00000540768 USP17L1Q7RTZ2 530 aa11.26□□□□□ -0.61
NUP85-203ENST00000540768 FCHSD1Q86WN1 690 aa11.26□□□□□ -0.61
NUP85-203ENST00000540768 BLIDQ8IZY5 108 aa11.26□□□□□ -0.61
NUP85-203ENST00000540768 NAV1Q8NEY1 1877 aa11.26□□□□□ -0.61
NUP85-203ENST00000540768 TGFBRAP1Q8WUH2 860 aa11.26□□□□□ -0.61
NUP85-203ENST00000540768 L2HGDHQ9H9P8 463 aa11.26□□□□□ -0.61
NUP85-203ENST00000540768 PCDHA4Q9UN74 947 aa11.26□□□□□ -0.61
NUP85-203ENST00000540768 BAZ2BQ9UIF8 2168 aaKnown RBP11.26□□□□□ -0.61
NUP85-203ENST00000540768 A0A1B0GTH6 734 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 LDHCP07864 332 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 ADRA2BP18089 450 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 MCM7P33993 719 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 GNAQP50148 359 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 CCDC93Q567U6 631 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 ARL6IP4Q66PJ3 421 aaKnown RBP11.25□□□□□ -0.61
NUP85-203ENST00000540768 SPECC1LQ69YQ0 1117 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 TYW1BQ6NUM6 668 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 REXO1L1PQ8IX06 675 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 TC2NQ8N9U0 490 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 GPKOWQ92917 476 aaPredicted RBP eCLIP11.25□□□□□ -0.61
NUP85-203ENST00000540768 MTRQ99707 1265 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 MKNK2Q9HBH9 465 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 ZNF215Q9UL58 517 aaPredicted RBP11.25□□□□□ -0.61
NUP85-203ENST00000540768 GPR75-ASB3A0A0A6YYF3 556 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 PALM3A6NDB9 673 aaPredicted RBP11.25□□□□□ -0.61
NUP85-203ENST00000540768 CYTH3O43739 400 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 PRKCSHP14314 528 aaPredicted RBP11.25□□□□□ -0.61
NUP85-203ENST00000540768 IL1R1P14778 569 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 RASA1P20936 1047 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 PPP4R3BQ5MIZ7 849 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 CDKAL1Q5VV42 579 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 TRIM65Q6PJ69 517 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 SYT10Q6XYQ8 523 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 IQUBQ8NA54 791 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 DAGLBQ8NCG7 672 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 SLC44A5Q8NCS7 719 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 PYM1Q9BRP8 204 aaKnown RBP11.25□□□□□ -0.61
NUP85-203ENST00000540768 CD209Q9NNX6 404 aa11.25□□□□□ -0.61
NUP85-203ENST00000540768 CDK5RAP2Q96SN8 1893 aa11.24□□□□□ -0.61
NUP85-203ENST00000540768 DDX60LQ5H9U9 1706 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms