RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 REPS2Q8NFH8 660 aa15.67■□□□□ 0.1
SEMA4D-223ENST00000540475 ATG4CQ96DT6 458 aa15.67■□□□□ 0.1
SEMA4D-223ENST00000540475 MKNK2Q9HBH9 465 aa15.67■□□□□ 0.1
SEMA4D-223ENST00000540475 ZNF287Q9HBT7 754 aa15.67■□□□□ 0.1
SEMA4D-223ENST00000540475 LAMA3Q16787 3333 aa15.66■□□□□ 0.1
SEMA4D-223ENST00000540475 PLIN4Q96Q06 1357 aa15.66■□□□□ 0.1
SEMA4D-223ENST00000540475 FOXP2O15409 715 aa15.66■□□□□ 0.1
SEMA4D-223ENST00000540475 SLC25A27O95847 323 aa15.66■□□□□ 0.1
SEMA4D-223ENST00000540475 ADORA2AP29274 412 aa15.66■□□□□ 0.1
SEMA4D-223ENST00000540475 FXR1P51114 621 aaKnown RBP eCLIP15.66■□□□□ 0.1
SEMA4D-223ENST00000540475 ANKRD45Q5TZF3 282 aa15.66■□□□□ 0.1
SEMA4D-223ENST00000540475 MFSD14CQ5VZR4 134 aa15.66■□□□□ 0.1
SEMA4D-223ENST00000540475 CWC22Q9HCG8 908 aaKnown RBP15.66■□□□□ 0.1
SEMA4D-223ENST00000540475 PPP1R9AQ9ULJ8 1098 aa15.66■□□□□ 0.1
SEMA4D-223ENST00000540475 TRIOBPQ9H2D6 2365 aa15.66■□□□□ 0.1
SEMA4D-223ENST00000540475 SMCHD1A6NHR9 2005 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 F5H6K3 240 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 VWA5AO00534 786 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 EVI5O60447 810 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 COBLO75128 1261 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 TDO2P48775 406 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 PDE1AP54750 535 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 ATP2B2Q01814 1243 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 KLRC3Q07444 240 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 WDR78Q5VTH9 848 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 RIOX2Q8IUF8 465 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 SMC5Q8IY18 1101 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 EVI5LQ96CN4 794 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 FSD1Q9BTV5 496 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 NACAP1Q9BZK3 213 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 C11orf49Q9H6J7 331 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 FBXO28Q9NVF7 368 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 ZNF214Q9UL59 606 aaPredicted RBP15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 PFASO15067 1338 aa15.65■□□□□ 0.1
SEMA4D-223ENST00000540475 MSCO60682 206 aa15.64■□□□□ 0.09
SEMA4D-223ENST00000540475 DPP9Q86TI2 863 aa15.64■□□□□ 0.09
SEMA4D-223ENST00000540475 ZNF444Q8N0Y2 327 aaPredicted RBP15.64■□□□□ 0.09
SEMA4D-223ENST00000540475 TRPV1Q8NER1 839 aa15.64■□□□□ 0.09
SEMA4D-223ENST00000540475 NEDD1Q8NHV4 660 aa15.64■□□□□ 0.09
SEMA4D-223ENST00000540475 MTMR4Q9NYA4 1195 aa15.64■□□□□ 0.09
SEMA4D-223ENST00000540475 RBM27Q9P2N5 1060 aaKnown RBP15.64■□□□□ 0.09
SEMA4D-223ENST00000540475 A0A1W2PPC1 479 aa15.63■□□□□ 0.09
SEMA4D-223ENST00000540475 ATP2A1O14983 1001 aa15.63■□□□□ 0.09
SEMA4D-223ENST00000540475 NDUFB10O96000 172 aa15.63■□□□□ 0.09
SEMA4D-223ENST00000540475 APPP05067 770 aa15.63■□□□□ 0.09
SEMA4D-223ENST00000540475 CYBAP13498 195 aa15.63■□□□□ 0.09
SEMA4D-223ENST00000540475 FAM83BQ5T0W9 1011 aa15.63■□□□□ 0.09
SEMA4D-223ENST00000540475 CHRDL2Q6WN34 429 aa15.63■□□□□ 0.09
SEMA4D-223ENST00000540475 CEP95Q96GE4 821 aa15.63■□□□□ 0.09
SEMA4D-223ENST00000540475 SLC5A4Q9NY91 659 aa15.63■□□□□ 0.09
SEMA4D-223ENST00000540475 DDX20Q9UHI6 824 aaKnown RBP15.63■□□□□ 0.09
SEMA4D-223ENST00000540475 ANAPC4Q9UJX5 808 aa15.63■□□□□ 0.09
SEMA4D-223ENST00000540475 DIS3Q9Y2L1 958 aaKnown RBP15.63■□□□□ 0.09
SEMA4D-223ENST00000540475 TTLL1O95922 423 aa15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 FGRP09769 529 aa15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 FCER1AP12319 257 aa15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 CYP2C19P33261 490 aa15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 COPB2P35606 906 aa15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 STAT3P40763 770 aa15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 NOVP48745 357 aa15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 PDE4BQ07343 736 aa15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 PPARAQ07869 468 aa15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 ALX1Q15699 326 aa15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 NCAPG2Q86XI2 1143 aa15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 PRPF38AQ8NAV1 312 aaKnown RBP15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 GMCL1P1Q8NEA9 526 aa15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 MAML3Q96JK9 1138 aa15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 NAPBQ9H115 298 aa15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 HELLSQ9NRZ9 838 aa15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 CLIP2Q9UDT6 1046 aa15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.62■□□□□ 0.09
SEMA4D-223ENST00000540475 PRDM1O75626 825 aa15.61■□□□□ 0.09
SEMA4D-223ENST00000540475 SLC3A2P08195 630 aaKnown RBP15.61■□□□□ 0.09
SEMA4D-223ENST00000540475 BMP8BP34820 402 aa15.61■□□□□ 0.09
SEMA4D-223ENST00000540475 PLS1Q14651 629 aa15.61■□□□□ 0.09
SEMA4D-223ENST00000540475 STK11IPQ8N1F8 1099 aa15.61■□□□□ 0.09
SEMA4D-223ENST00000540475 SLF1Q9BQI6 1058 aa15.61■□□□□ 0.09
SEMA4D-223ENST00000540475 OSBPL3Q9H4L5 887 aa15.61■□□□□ 0.09
SEMA4D-223ENST00000540475 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
SEMA4D-223ENST00000540475 NRBP1Q9UHY1 535 aa15.61■□□□□ 0.09
SEMA4D-223ENST00000540475 SEPT4O43236 478 aa15.6■□□□□ 0.09
SEMA4D-223ENST00000540475 ZNF792Q3KQV3 632 aa15.6■□□□□ 0.09
SEMA4D-223ENST00000540475 NUP88Q99567 741 aaPredicted RBP15.6■□□□□ 0.09
SEMA4D-223ENST00000540475 GDF15Q99988 308 aa15.6■□□□□ 0.09
SEMA4D-223ENST00000540475 DNM1LO00429 736 aa15.59■□□□□ 0.09
SEMA4D-223ENST00000540475 TFAP4Q01664 338 aa15.59■□□□□ 0.09
SEMA4D-223ENST00000540475 VPS53Q5VIR6 699 aa15.59■□□□□ 0.09
SEMA4D-223ENST00000540475 CCDC129Q6ZRS4 1044 aa15.59■□□□□ 0.09
SEMA4D-223ENST00000540475 MMP19Q99542 508 aa15.59■□□□□ 0.09
SEMA4D-223ENST00000540475 TEX13BQ9BXU2 312 aa15.59■□□□□ 0.09
SEMA4D-223ENST00000540475 RWDD1Q9H446 243 aaPredicted RBP15.59■□□□□ 0.09
SEMA4D-223ENST00000540475 SLC38A10Q9HBR0 1119 aa15.59■□□□□ 0.09
SEMA4D-223ENST00000540475 FEM1BQ9UK73 627 aa15.59■□□□□ 0.09
SEMA4D-223ENST00000540475 LAMA2P24043 3122 aaKnown RBP15.58■□□□□ 0.08
SEMA4D-223ENST00000540475 DNAJC25-GNG10A0A024R161 153 aa15.58■□□□□ 0.08
SEMA4D-223ENST00000540475 PLA2G6O60733 806 aa15.58■□□□□ 0.08
SEMA4D-223ENST00000540475 IGHDP01880 384 aa15.58■□□□□ 0.08
SEMA4D-223ENST00000540475 TSPY3P0CV98 308 aa15.58■□□□□ 0.08
SEMA4D-223ENST00000540475 TSPY8P0CW00 308 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms