RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 PUS7LQ9H0K6 701 aaKnown RBP17.16■□□□□ 0.34
SEMA4D-222ENST00000540183 SLC4A4Q9Y6R1 1079 aa17.16■□□□□ 0.34
SEMA4D-222ENST00000540183 SEPT4O43236 478 aa17.15■□□□□ 0.34
SEMA4D-222ENST00000540183 PGK2P07205 417 aa17.15■□□□□ 0.34
SEMA4D-222ENST00000540183 MS4A1P11836 297 aa17.15■□□□□ 0.34
SEMA4D-222ENST00000540183 CTR9Q6PD62 1173 aa17.15■□□□□ 0.34
SEMA4D-222ENST00000540183 SLC39A5Q6ZMH5 540 aa17.15■□□□□ 0.34
SEMA4D-222ENST00000540183 MB21D1Q8N884 522 aa17.15■□□□□ 0.34
SEMA4D-222ENST00000540183 FERMT2Q96AC1 680 aa17.15■□□□□ 0.34
SEMA4D-222ENST00000540183 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.15■□□□□ 0.34
SEMA4D-222ENST00000540183 MROH8Q9H579 483 aa17.15■□□□□ 0.34
SEMA4D-222ENST00000540183 EYSQ5T1H1 3165 aa17.15■□□□□ 0.34
SEMA4D-222ENST00000540183 WDR46O15213 610 aaKnown RBP17.14■□□□□ 0.33
SEMA4D-222ENST00000540183 RAD21O60216 631 aa17.14■□□□□ 0.33
SEMA4D-222ENST00000540183 ADCYAP1R1P41586 468 aa17.14■□□□□ 0.33
SEMA4D-222ENST00000540183 UBE3CQ15386 1083 aa17.14■□□□□ 0.33
SEMA4D-222ENST00000540183 TRIM60Q495X7 471 aa17.14■□□□□ 0.33
SEMA4D-222ENST00000540183 FAM47AQ5JRC9 791 aa17.14■□□□□ 0.33
SEMA4D-222ENST00000540183 FAM83BQ5T0W9 1011 aa17.14■□□□□ 0.33
SEMA4D-222ENST00000540183 FAM161BQ96MY7 647 aa17.14■□□□□ 0.33
SEMA4D-222ENST00000540183 LBHD1Q9BQE6 289 aaPredicted RBP17.14■□□□□ 0.33
SEMA4D-222ENST00000540183 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.14■□□□□ 0.33
SEMA4D-222ENST00000540183 STXBP5LQ9Y2K9 1186 aa17.14■□□□□ 0.33
SEMA4D-222ENST00000540183 CUL9Q8IWT3 2517 aa17.13■□□□□ 0.33
SEMA4D-222ENST00000540183 KBTBD13C9JR72 458 aa17.13■□□□□ 0.33
SEMA4D-222ENST00000540183 FCER1AP12319 257 aa17.13■□□□□ 0.33
SEMA4D-222ENST00000540183 TAL1P17542 331 aaPredicted RBP17.13■□□□□ 0.33
SEMA4D-222ENST00000540183 LRRC41Q15345 812 aa17.13■□□□□ 0.33
SEMA4D-222ENST00000540183 SH3RF1Q7Z6J0 888 aa17.13■□□□□ 0.33
SEMA4D-222ENST00000540183 ABRAQ8N0Z2 381 aa17.13■□□□□ 0.33
SEMA4D-222ENST00000540183 ARRDC4Q8NCT1 418 aa17.13■□□□□ 0.33
SEMA4D-222ENST00000540183 CCDC17Q96LX7 622 aa17.13■□□□□ 0.33
SEMA4D-222ENST00000540183 NUP88Q99567 741 aaPredicted RBP17.13■□□□□ 0.33
SEMA4D-222ENST00000540183 SH2D4AQ9H788 454 aa17.13■□□□□ 0.33
SEMA4D-222ENST00000540183 PRDM5Q9NQX1 630 aaPredicted RBP17.13■□□□□ 0.33
SEMA4D-222ENST00000540183 ADAMTS5Q9UNA0 930 aa17.13■□□□□ 0.33
SEMA4D-222ENST00000540183 C9orf50Q5SZB4 431 aa17.12■□□□□ 0.33
SEMA4D-222ENST00000540183 TSHZ3Q63HK5 1081 aa17.12■□□□□ 0.33
SEMA4D-222ENST00000540183 REPS2Q8NFH8 660 aa17.12■□□□□ 0.33
SEMA4D-222ENST00000540183 LENG1Q96BZ8 264 aaPredicted RBP17.12■□□□□ 0.33
SEMA4D-222ENST00000540183 GUCD1Q96NT3 240 aa17.12■□□□□ 0.33
SEMA4D-222ENST00000540183 MMP19Q99542 508 aa17.12■□□□□ 0.33
SEMA4D-222ENST00000540183 VWA5AO00534 786 aa17.11■□□□□ 0.33
SEMA4D-222ENST00000540183 SHHQ15465 462 aa17.11■□□□□ 0.33
SEMA4D-222ENST00000540183 RIOX2Q8IUF8 465 aa17.11■□□□□ 0.33
SEMA4D-222ENST00000540183 AMOTL1Q8IY63 956 aa17.11■□□□□ 0.33
SEMA4D-222ENST00000540183 BADQ92934 168 aa17.11■□□□□ 0.33
SEMA4D-222ENST00000540183 STRBPQ96SI9 672 aaKnown RBP17.11■□□□□ 0.33
SEMA4D-222ENST00000540183 LRRCC1Q9C099 1032 aa17.11■□□□□ 0.33
SEMA4D-222ENST00000540183 KANSL2Q9H9L4 492 aa17.11■□□□□ 0.33
SEMA4D-222ENST00000540183 PDLIM7Q9NR12 457 aa17.11■□□□□ 0.33
SEMA4D-222ENST00000540183 SLC5A4Q9NY91 659 aa17.11■□□□□ 0.33
SEMA4D-222ENST00000540183 PRKAG2Q9UGJ0 569 aa17.11■□□□□ 0.33
SEMA4D-222ENST00000540183 ZNF214Q9UL59 606 aaPredicted RBP17.11■□□□□ 0.33
SEMA4D-222ENST00000540183 PPP1R9AQ9ULJ8 1098 aa17.11■□□□□ 0.33
SEMA4D-222ENST00000540183 CDH23Q9H251 3354 aa17.11■□□□□ 0.33
SEMA4D-222ENST00000540183 TRIM43BA6NCK2 446 aa17.1■□□□□ 0.33
SEMA4D-222ENST00000540183 POTEB2H3BUK9 544 aa17.1■□□□□ 0.33
SEMA4D-222ENST00000540183 SLC25A27O95847 323 aa17.1■□□□□ 0.33
SEMA4D-222ENST00000540183 PGK1P00558 417 aa17.1■□□□□ 0.33
SEMA4D-222ENST00000540183 STAT3P40763 770 aa17.1■□□□□ 0.33
SEMA4D-222ENST00000540183 SNX17Q15036 470 aa17.1■□□□□ 0.33
SEMA4D-222ENST00000540183 ZNF792Q3KQV3 632 aa17.1■□□□□ 0.33
SEMA4D-222ENST00000540183 TRIM43Q96BQ3 446 aaPredicted RBP17.1■□□□□ 0.33
SEMA4D-222ENST00000540183 RCAN3Q9UKA8 241 aa17.1■□□□□ 0.33
SEMA4D-222ENST00000540183 GSG1L2A8MUP6 293 aa17.09■□□□□ 0.33
SEMA4D-222ENST00000540183 RASA1P20936 1047 aa17.09■□□□□ 0.33
SEMA4D-222ENST00000540183 DDRGK1Q96HY6 314 aa17.09■□□□□ 0.33
SEMA4D-222ENST00000540183 TINF2Q9BSI4 451 aa17.09■□□□□ 0.33
SEMA4D-222ENST00000540183 GOPCQ9HD26 462 aa17.09■□□□□ 0.33
SEMA4D-222ENST00000540183 XPNPEP3Q9NQH7 507 aa17.09■□□□□ 0.33
SEMA4D-222ENST00000540183 MINDY4BA8MYZ0 360 aa17.08■□□□□ 0.32
SEMA4D-222ENST00000540183 ZNF865P0CJ78 1059 aaPredicted RBP17.08■□□□□ 0.32
SEMA4D-222ENST00000540183 ITGB8P26012 769 aa17.08■□□□□ 0.32
SEMA4D-222ENST00000540183 TLE2Q04725 743 aa17.08■□□□□ 0.32
SEMA4D-222ENST00000540183 KCTD2Q14681 263 aa17.08■□□□□ 0.32
SEMA4D-222ENST00000540183 ZSCAN25Q6NSZ9 544 aa17.08■□□□□ 0.32
SEMA4D-222ENST00000540183 OSBP2Q969R2 916 aa17.08■□□□□ 0.32
SEMA4D-222ENST00000540183 EPB41L4AQ9HCS5 686 aaPredicted RBP17.08■□□□□ 0.32
SEMA4D-222ENST00000540183 ARPP21Q9UBL0 812 aaPredicted RBP17.08■□□□□ 0.32
SEMA4D-222ENST00000540183 RIPK3Q9Y572 518 aa17.08■□□□□ 0.32
SEMA4D-222ENST00000540183 NDUFB10O96000 172 aa17.07■□□□□ 0.32
SEMA4D-222ENST00000540183 SLC4A3P48751 1232 aa17.07■□□□□ 0.32
SEMA4D-222ENST00000540183 ECHDC1Q9NTX5 307 aa17.07■□□□□ 0.32
SEMA4D-222ENST00000540183 PHF24Q9UPV7 400 aa17.07■□□□□ 0.32
SEMA4D-222ENST00000540183 PRUNE2Q8WUY3 3088 aa17.07■□□□□ 0.32
SEMA4D-222ENST00000540183 ROBO3Q96MS0 1386 aa17.06■□□□□ 0.32
SEMA4D-222ENST00000540183 M0R2C6 588 aa17.06■□□□□ 0.32
SEMA4D-222ENST00000540183 PRDM1O75626 825 aa17.06■□□□□ 0.32
SEMA4D-222ENST00000540183 RARBP10826 455 aa17.06■□□□□ 0.32
SEMA4D-222ENST00000540183 EPHB4P54760 987 aa17.06■□□□□ 0.32
SEMA4D-222ENST00000540183 IRX5P78411 483 aaPredicted RBP17.06■□□□□ 0.32
SEMA4D-222ENST00000540183 SBK1Q52WX2 424 aa17.06■□□□□ 0.32
SEMA4D-222ENST00000540183 FAM109BQ6ICB4 259 aaPredicted RBP17.06■□□□□ 0.32
SEMA4D-222ENST00000540183 SNRNP48Q6IEG0 339 aaKnown RBP17.06■□□□□ 0.32
SEMA4D-222ENST00000540183 SLF1Q9BQI6 1058 aa17.06■□□□□ 0.32
SEMA4D-222ENST00000540183 MKNK2Q9HBH9 465 aa17.06■□□□□ 0.32
SEMA4D-222ENST00000540183 A0A1W2PQ45 241 aaPredicted RBP17.05■□□□□ 0.32
SEMA4D-222ENST00000540183 A0A1W2PQY0 241 aa17.05■□□□□ 0.32
SEMA4D-222ENST00000540183 F5H6K3 240 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms