RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 MAATS1Q7Z4T9 603 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 GPATCH11Q8N954 259 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 TBC1D16Q8TBP0 767 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 STAMQ92783 540 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 CRAMP1Q96RY5 1269 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 BCORQ6W2J9 1755 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 PDS5AQ29RF7 1337 aaKnown RBP11.26□□□□□ -0.61
TRAF1-202ENST00000540010 POLR2DO15514 142 aaKnown RBP11.26□□□□□ -0.61
TRAF1-202ENST00000540010 STAT6P42226 847 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 ZNF827Q17R98 1081 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 TBC1D22AQ8WUA7 517 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 FMNL1O95466 1100 aaPredicted RBP11.26□□□□□ -0.61
TRAF1-202ENST00000540010 PLCG2P16885 1265 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 TFAP4Q01664 338 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 ARID5AQ03989 594 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 TMC4Q7Z404 712 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 PROM2Q8N271 834 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 ENAHQ8N8S7 591 aaPredicted RBP11.26□□□□□ -0.61
TRAF1-202ENST00000540010 KRI1Q8N9T8 703 aaKnown RBP11.26□□□□□ -0.61
TRAF1-202ENST00000540010 VPS16Q9H269 839 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 ANAPC4Q9UJX5 808 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 KCNH3Q9ULD8 1083 aa11.26□□□□□ -0.61
TRAF1-202ENST00000540010 SCN7AQ01118 1682 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 PICALMQ13492 652 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 DOK7Q18PE1 504 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 TRMT44Q8IYL2 757 aaKnown RBP11.25□□□□□ -0.61
TRAF1-202ENST00000540010 CTAGE1Q96RT6 745 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 MMRN2Q9H8L6 949 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 RTEL1Q9NZ71 1219 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 KIF20AO95235 890 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 NPR1P16066 1061 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 MNAT1P51948 309 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 SF3B2Q13435 895 aaKnown RBP11.25□□□□□ -0.61
TRAF1-202ENST00000540010 GPIHBP1Q8IV16 184 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 DIS3L2Q8IYB7 885 aaKnown RBP11.25□□□□□ -0.61
TRAF1-202ENST00000540010 ZNF384Q8TF68 577 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 DYDC1Q8WWB3 177 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 NFE2L3Q9Y4A8 694 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.25□□□□□ -0.61
TRAF1-202ENST00000540010 TACC3Q9Y6A5 838 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 V9GY48 417 aaPredicted RBP11.25□□□□□ -0.61
TRAF1-202ENST00000540010 VWA3AA6NCI4 1184 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 SSR1P43307 286 aaKnown RBP11.25□□□□□ -0.61
TRAF1-202ENST00000540010 UBXN1Q04323 297 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 CRY2Q49AN0 593 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 DYNLL2Q96FJ2 89 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 ALS2CR12Q96Q35 445 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 TSG101Q99816 390 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 MTA3Q9BTC8 594 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 POLLQ9UGP5 575 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 PCDHA7Q9UN72 937 aa11.25□□□□□ -0.61
TRAF1-202ENST00000540010 NMT2O60551 498 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 KIF5BP33176 963 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 RBM28Q9NW13 759 aaKnown RBP11.24□□□□□ -0.61
TRAF1-202ENST00000540010 CICQ96RK0 1608 aaPredicted RBP11.24□□□□□ -0.61
TRAF1-202ENST00000540010 KIF28PB7ZC32 967 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 MCM7P33993 719 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 PPARDQ03181 441 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 PPP2R5BQ15173 497 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 PTPN21Q16825 1174 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 TMED8Q6PL24 325 aaPredicted RBP11.24□□□□□ -0.61
TRAF1-202ENST00000540010 CALML4Q96GE6 196 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 RABEP2Q9H5N1 569 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 MYO5AQ9Y4I1 1855 aaKnown RBP11.24□□□□□ -0.61
TRAF1-202ENST00000540010 COL4A1P02462 1669 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 CYLC1P35663 651 aaPredicted RBP11.24□□□□□ -0.61
TRAF1-202ENST00000540010 SPAG1Q07617 926 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 ZNF174Q15697 407 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 LONRF3Q496Y0 759 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 C2CD5Q86YS7 1000 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 SP8Q8IXZ3 490 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 CRACR2BQ8N4Y2 399 aaPredicted RBP11.24□□□□□ -0.61
TRAF1-202ENST00000540010 CEP112Q8N8E3 955 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 IGSF22Q8N9C0 903 aa11.24□□□□□ -0.61
TRAF1-202ENST00000540010 ANKRD62A6NC57 917 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 BTBD18B2RXH4 712 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 H0YIN7 160 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 UBE2Q2LH0YL09 131 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 PLSCR1O15162 318 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 WDHD1O75717 1129 aaPredicted RBP11.23□□□□□ -0.61
TRAF1-202ENST00000540010 LINC00301Q8NCQ3 95 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 RAB34Q9BZG1 259 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 MROH7-TTC4A0A0A0MT08 1334 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 PSMA7O14818 248 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 ASIC1P78348 528 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 TMEM266Q2M3C6 531 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 CERS3Q8IU89 383 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 CACTINQ8WUQ7 758 aaKnown RBP11.23□□□□□ -0.61
TRAF1-202ENST00000540010 EYA3Q99504 573 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 POLR3EQ9NVU0 708 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 STK32BQ9NY57 414 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 GOLGA6L7A0A1B0GV03 622 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 AKR1B15C9JRZ8 316 aaPredicted RBP11.23□□□□□ -0.61
TRAF1-202ENST00000540010 TUBB4AP04350 444 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 HOXA10P31260 410 aaPredicted RBP11.23□□□□□ -0.61
TRAF1-202ENST00000540010 GUCY1A2P33402 732 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 ADKP55263 362 aaKnown RBP11.23□□□□□ -0.61
TRAF1-202ENST00000540010 GRIK5Q16478 980 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 ADALQ6DHV7 355 aa11.23□□□□□ -0.61
TRAF1-202ENST00000540010 CCDC42Q96M95 316 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms