RNA–Protein interactions for RNA: ENST00000539891.5

SLC3A2-215, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best)

Gene SLC3A2, Length 1,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-215ENST00000539891 INHAP05111 366 aa12.82□□□□□ -0.36
SLC3A2-215ENST00000539891 GJB1P08034 283 aa12.82□□□□□ -0.36
SLC3A2-215ENST00000539891 CCL5P13501 91 aa12.82□□□□□ -0.36
SLC3A2-215ENST00000539891 EN2P19622 333 aaPredicted RBP12.82□□□□□ -0.36
SLC3A2-215ENST00000539891 NOVP48745 357 aa12.82□□□□□ -0.36
SLC3A2-215ENST00000539891 FAM83BQ5T0W9 1011 aa12.82□□□□□ -0.36
SLC3A2-215ENST00000539891 TRMT44Q8IYL2 757 aaKnown RBP12.82□□□□□ -0.36
SLC3A2-215ENST00000539891 SHCBP1Q8NEM2 672 aa12.82□□□□□ -0.36
SLC3A2-215ENST00000539891 NKX2-3Q8TAU0 364 aa12.82□□□□□ -0.36
SLC3A2-215ENST00000539891 ATG4CQ96DT6 458 aa12.82□□□□□ -0.36
SLC3A2-215ENST00000539891 DSCC1Q9BVC3 393 aa12.82□□□□□ -0.36
SLC3A2-215ENST00000539891 MOV10L1Q9BXT6 1211 aaKnown RBP12.82□□□□□ -0.36
SLC3A2-215ENST00000539891 SPATC1LQ9H0A9 340 aa12.82□□□□□ -0.36
SLC3A2-215ENST00000539891 INCENPQ9NQS7 918 aa12.82□□□□□ -0.36
SLC3A2-215ENST00000539891 PPP1R9AQ9ULJ8 1098 aa12.82□□□□□ -0.36
SLC3A2-215ENST00000539891 SLC15A5A6NIM6 579 aa12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 TSPY2A6NKD2 308 aa12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 STRNO43815 780 aa12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 MYCP01106 439 aaPredicted RBP12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 HOXC6P09630 235 aa12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 CAPN2P17655 700 aa12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 PTPREP23469 700 aa12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 RGS2P41220 211 aa12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 NT5C2P49902 561 aa12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 MAP2K5Q13163 448 aa12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 GRB14Q14449 540 aa12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 STAG1Q8WVM7 1258 aa12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 RNF208Q9H0X6 261 aa12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 UNC93B1Q9H1C4 597 aa12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 IL17RBQ9NRM6 502 aa12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 FBXO28Q9NVF7 368 aa12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 PLXNA1Q9UIW2 1896 aa12.81□□□□□ -0.36
SLC3A2-215ENST00000539891 VWA5AO00534 786 aa12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 RANBP6O60518 1105 aaKnown RBP12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 CYP2B6P20813 491 aa12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 GJA8P48165 433 aa12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 TMEM132BQ14DG7 1078 aa12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 AKNAD1Q5T1N1 836 aa12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 PRPF38AQ8NAV1 312 aaKnown RBP12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 REPS2Q8NFH8 660 aa12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 TRIB2Q92519 343 aa12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 APBA2Q99767 749 aa12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 NBPF3Q9H094 633 aa12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 MROH8Q9H579 483 aa12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 CWC22Q9HCG8 908 aaKnown RBP12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 PAK6Q9NQU5 681 aaPredicted RBP12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 TCP11L1Q9NUJ3 509 aa12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 IVNS1ABPQ9Y6Y0 642 aa12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 RAD50Q92878 1312 aa12.8□□□□□ -0.36
SLC3A2-215ENST00000539891 ZNF213O14771 459 aa12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 RAD21O60216 631 aa12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 SLC25A27O95847 323 aa12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 ERCC3P19447 782 aa12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 HAND2P61296 217 aa12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 MAP3K21Q5TCX8 1036 aa12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 SLFN13Q68D06 897 aa12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 MFSD6Q6ZSS7 791 aa12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 CENPQQ7L2Z9 268 aaPredicted RBP12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 ABRAQ8N0Z2 381 aa12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 LRRC47Q8N1G4 583 aaKnown RBP12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 SHISA4Q96DD7 197 aa12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 GMCL1Q96IK5 515 aa12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 NUP88Q99567 741 aaPredicted RBP12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 SLF1Q9BQI6 1058 aa12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 RNF41Q9H4P4 317 aaPredicted RBP12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 FEM1BQ9UK73 627 aa12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 ZNF214Q9UL59 606 aaPredicted RBP12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 STX8Q9UNK0 236 aa12.79□□□□□ -0.36
SLC3A2-215ENST00000539891 NMT2O60551 498 aa12.78□□□□□ -0.36
SLC3A2-215ENST00000539891 SGPL1O95470 568 aa12.78□□□□□ -0.36
SLC3A2-215ENST00000539891 BMP3P12645 472 aa12.78□□□□□ -0.36
SLC3A2-215ENST00000539891 ZKSCAN1P17029 563 aaPredicted RBP12.78□□□□□ -0.36
SLC3A2-215ENST00000539891 CHMLP26374 656 aa12.78□□□□□ -0.36
SLC3A2-215ENST00000539891 COPB2P35606 906 aa12.78□□□□□ -0.36
SLC3A2-215ENST00000539891 PLS1Q14651 629 aa12.78□□□□□ -0.36
SLC3A2-215ENST00000539891 WDR78Q5VTH9 848 aa12.78□□□□□ -0.36
SLC3A2-215ENST00000539891 RIOX2Q8IUF8 465 aa12.78□□□□□ -0.36
SLC3A2-215ENST00000539891 TBC1D10CQ8IV04 446 aa12.78□□□□□ -0.36
SLC3A2-215ENST00000539891 RUFY2Q8WXA3 655 aa12.78□□□□□ -0.36
SLC3A2-215ENST00000539891 IL25Q9H293 177 aa12.78□□□□□ -0.36
SLC3A2-215ENST00000539891 CTNNA3Q9UI47 895 aa12.78□□□□□ -0.36
SLC3A2-215ENST00000539891 RPTORQ8N122 1335 aa12.78□□□□□ -0.36
SLC3A2-215ENST00000539891 FRMPD3Q5JV73 1810 aa12.77□□□□□ -0.36
SLC3A2-215ENST00000539891 ATP2A1O14983 1001 aa12.77□□□□□ -0.37
SLC3A2-215ENST00000539891 PLA2G6O60733 806 aa12.77□□□□□ -0.37
SLC3A2-215ENST00000539891 IGHA2P01877 340 aa12.77□□□□□ -0.37
SLC3A2-215ENST00000539891 FDX1P10109 184 aa12.77□□□□□ -0.37
SLC3A2-215ENST00000539891 STAT3P40763 770 aa12.77□□□□□ -0.37
SLC3A2-215ENST00000539891 TRIM32Q13049 653 aa12.77□□□□□ -0.37
SLC3A2-215ENST00000539891 IMMTQ16891 758 aaKnown RBP12.77□□□□□ -0.37
SLC3A2-215ENST00000539891 RRP12Q5JTH9 1297 aaKnown RBP12.77□□□□□ -0.37
SLC3A2-215ENST00000539891 U2AF1L4Q8WU68 220 aaKnown RBP12.77□□□□□ -0.37
SLC3A2-215ENST00000539891 TTC14Q96N46 770 aa12.77□□□□□ -0.37
SLC3A2-215ENST00000539891 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.77□□□□□ -0.376e-21■■■■□ 21.1
SLC3A2-215ENST00000539891 HMX1Q9NP08 348 aaPredicted RBP12.77□□□□□ -0.37
SLC3A2-215ENST00000539891 TOMM22Q9NS69 142 aa12.77□□□□□ -0.37
SLC3A2-215ENST00000539891 SMCHD1A6NHR9 2005 aa12.76□□□□□ -0.37
SLC3A2-215ENST00000539891 TOP1P11387 765 aaKnown RBP12.76□□□□□ -0.37
SLC3A2-215ENST00000539891 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
SLC3A2-215ENST00000539891 ADORA2AP29274 412 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms