RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 CUTAO60888 179 aa25.77■■□□□ 1.72
HOMER3-204ENST00000539827 PFKFB1P16118 471 aa25.77■■□□□ 1.72
HOMER3-204ENST00000539827 TYW1BQ6NUM6 668 aa25.77■■□□□ 1.72
HOMER3-204ENST00000539827 SHC4Q6S5L8 630 aa25.77■■□□□ 1.72
HOMER3-204ENST00000539827 HEATR3Q7Z4Q2 680 aa25.77■■□□□ 1.72
HOMER3-204ENST00000539827 OGFOD1Q8N543 542 aa25.77■■□□□ 1.72
HOMER3-204ENST00000539827 SGIP1Q9BQI5 828 aa25.77■■□□□ 1.72
HOMER3-204ENST00000539827 SH3GLB2Q9NR46 395 aa25.77■■□□□ 1.72
HOMER3-204ENST00000539827 TMOD2Q9NZR1 351 aa25.77■■□□□ 1.72
HOMER3-204ENST00000539827 BCS1LQ9Y276 419 aa25.77■■□□□ 1.72
HOMER3-204ENST00000539827 BRCA1P38398 1863 aaKnown RBP25.77■■□□□ 1.72
HOMER3-204ENST00000539827 ZNF70Q9UC06 446 aaPredicted RBP25.76■■□□□ 1.72
HOMER3-204ENST00000539827 MRVI1Q9Y6F6 885 aa25.76■■□□□ 1.72
HOMER3-204ENST00000539827 GREB1LQ9C091 1923 aaPredicted RBP25.76■■□□□ 1.71
HOMER3-204ENST00000539827 CTAGE5O15320 804 aa25.76■■□□□ 1.71
HOMER3-204ENST00000539827 HOMER1Q86YM7 354 aa25.76■■□□□ 1.71
HOMER3-204ENST00000539827 GPCPD1Q9NPB8 672 aa25.76■■□□□ 1.71
HOMER3-204ENST00000539827 NOL7Q9UMY1 257 aaKnown RBP25.76■■□□□ 1.71
HOMER3-204ENST00000539827 NFKBIEO00221 500 aa25.75■■□□□ 1.71
HOMER3-204ENST00000539827 SASS6Q6UVJ0 657 aa25.75■■□□□ 1.71
HOMER3-204ENST00000539827 BLIDQ8IZY5 108 aa25.75■■□□□ 1.71
HOMER3-204ENST00000539827 KRI1Q8N9T8 703 aaKnown RBP25.75■■□□□ 1.71
HOMER3-204ENST00000539827 FER1L6Q2WGJ9 1857 aa25.75■■□□□ 1.71
HOMER3-204ENST00000539827 TRIM75PA6NK02 468 aa25.75■■□□□ 1.71
HOMER3-204ENST00000539827 STXBP3O00186 592 aa25.75■■□□□ 1.71
HOMER3-204ENST00000539827 WNT7AO00755 349 aa25.75■■□□□ 1.71
HOMER3-204ENST00000539827 CALML3P27482 149 aa25.75■■□□□ 1.71
HOMER3-204ENST00000539827 TATDN1Q6P1N9 297 aa25.75■■□□□ 1.71
HOMER3-204ENST00000539827 PIK3AP1Q6ZUJ8 805 aa25.75■■□□□ 1.71
HOMER3-204ENST00000539827 AGBL3Q8NEM8 1001 aa25.75■■□□□ 1.71
HOMER3-204ENST00000539827 CEP131Q9UPN4 1083 aa25.75■■□□□ 1.71
HOMER3-204ENST00000539827 ATRNL1Q5VV63 1379 aa25.74■■□□□ 1.71
HOMER3-204ENST00000539827 ZNF202O95125 648 aa25.74■■□□□ 1.71
HOMER3-204ENST00000539827 GRIN1Q05586 938 aa25.74■■□□□ 1.71
HOMER3-204ENST00000539827 CCDC173Q0VFZ6 552 aa25.74■■□□□ 1.71
HOMER3-204ENST00000539827 CIAPIN1Q6FI81 312 aa25.74■■□□□ 1.71
HOMER3-204ENST00000539827 RRP36Q96EU6 259 aaKnown RBP25.74■■□□□ 1.71
HOMER3-204ENST00000539827 PIGSQ96S52 555 aa25.74■■□□□ 1.71
HOMER3-204ENST00000539827 BARHL2Q9NY43 387 aa25.74■■□□□ 1.71
HOMER3-204ENST00000539827 FBXO2Q9UK22 296 aaPredicted RBP25.74■■□□□ 1.71
HOMER3-204ENST00000539827 PCDHA4Q9UN74 947 aa25.74■■□□□ 1.71
HOMER3-204ENST00000539827 CD2APQ9Y5K6 639 aa25.74■■□□□ 1.71
HOMER3-204ENST00000539827 GDF11O95390 407 aa25.73■■□□□ 1.71
HOMER3-204ENST00000539827 SNHG28P0DPA3 235 aa25.73■■□□□ 1.71
HOMER3-204ENST00000539827 ASPRV1Q53RT3 343 aa25.73■■□□□ 1.71
HOMER3-204ENST00000539827 RESP18Q5W5W9 173 aa25.73■■□□□ 1.71
HOMER3-204ENST00000539827 JDP2Q8WYK2 163 aa25.73■■□□□ 1.71
HOMER3-204ENST00000539827 SDF4Q9BRK5 362 aa25.73■■□□□ 1.71
HOMER3-204ENST00000539827 MYH4Q9Y623 1939 aa25.73■■□□□ 1.71
HOMER3-204ENST00000539827 PTPREP23469 700 aa25.73■■□□□ 1.71
HOMER3-204ENST00000539827 SMARCA1P28370 1054 aa25.73■■□□□ 1.71
HOMER3-204ENST00000539827 ZNF174Q15697 407 aa25.73■■□□□ 1.71
HOMER3-204ENST00000539827 SPECC1Q5M775 1068 aa25.73■■□□□ 1.71
HOMER3-204ENST00000539827 RASGRP4Q8TDF6 673 aa25.73■■□□□ 1.71
HOMER3-204ENST00000539827 ERCC4Q92889 916 aaPredicted RBP25.73■■□□□ 1.71
HOMER3-204ENST00000539827 CSRNP1Q96S65 589 aa25.73■■□□□ 1.71
HOMER3-204ENST00000539827 SEPT2Q15019 361 aa25.72■■□□□ 1.71
HOMER3-204ENST00000539827 UVSSAQ2YD98 709 aa25.72■■□□□ 1.71
HOMER3-204ENST00000539827 TTC38Q5R3I4 469 aa25.72■■□□□ 1.71
HOMER3-204ENST00000539827 METTL16Q86W50 562 aaKnown RBP25.72■■□□□ 1.71
HOMER3-204ENST00000539827 CCDC148Q8NFR7 591 aa25.72■■□□□ 1.71
HOMER3-204ENST00000539827 PPP1R9BQ96SB3 815 aa25.72■■□□□ 1.71
HOMER3-204ENST00000539827 RIOX1Q9H6W3 641 aa25.72■■□□□ 1.71
HOMER3-204ENST00000539827 VEZTQ9HBM0 779 aa25.72■■□□□ 1.71
HOMER3-204ENST00000539827 HPSEQ9Y251 543 aa25.72■■□□□ 1.71
HOMER3-204ENST00000539827 EEF2P13639 858 aaKnown RBP25.71■■□□□ 1.71
HOMER3-204ENST00000539827 PTGER2P43116 358 aa25.71■■□□□ 1.71
HOMER3-204ENST00000539827 SPDYE2Q495Y8 402 aa25.71■■□□□ 1.71
HOMER3-204ENST00000539827 ANO6Q4KMQ2 910 aa25.71■■□□□ 1.71
HOMER3-204ENST00000539827 SEC63Q9UGP8 760 aaKnown RBP25.71■■□□□ 1.71
HOMER3-204ENST00000539827 SHTN1A0MZ66 631 aa25.71■■□□□ 1.71
HOMER3-204ENST00000539827 SYKP43405 635 aa25.71■■□□□ 1.71
HOMER3-204ENST00000539827 ZNF543Q08ER8 600 aa25.71■■□□□ 1.71
HOMER3-204ENST00000539827 COL2A1P02458 1487 aaPredicted RBP25.7■■□□□ 1.71
HOMER3-204ENST00000539827 SOCS7O14512 581 aa25.7■■□□□ 1.7
HOMER3-204ENST00000539827 NAPAP54920 295 aa25.7■■□□□ 1.7
HOMER3-204ENST00000539827 RASSF7Q02833 373 aa25.7■■□□□ 1.7
HOMER3-204ENST00000539827 CCDC96Q2M329 555 aa25.7■■□□□ 1.7
HOMER3-204ENST00000539827 ABCB5Q2M3G0 1257 aa25.7■■□□□ 1.7
HOMER3-204ENST00000539827 PPP4R3BQ5MIZ7 849 aa25.7■■□□□ 1.7
HOMER3-204ENST00000539827 TTBK2Q6IQ55 1244 aa25.7■■□□□ 1.7
HOMER3-204ENST00000539827 FAM151AQ8WW52 585 aa25.7■■□□□ 1.7
HOMER3-204ENST00000539827 KANSL2Q9H9L4 492 aa25.7■■□□□ 1.7
HOMER3-204ENST00000539827 RAD21O60216 631 aa25.69■■□□□ 1.7
HOMER3-204ENST00000539827 JAG1P78504 1218 aa25.69■■□□□ 1.7
HOMER3-204ENST00000539827 RRP1BQ14684 758 aaKnown RBP25.69■■□□□ 1.7
HOMER3-204ENST00000539827 PCDHA6Q9UN73 950 aa25.69■■□□□ 1.7
HOMER3-204ENST00000539827 PCDHA8Q9Y5H6 950 aa25.69■■□□□ 1.7
HOMER3-204ENST00000539827 SRPRBQ9Y5M8 271 aaKnown RBP25.69■■□□□ 1.7
HOMER3-204ENST00000539827 FAM237AA0A1B0GTK4 181 aa25.69■■□□□ 1.7
HOMER3-204ENST00000539827 DAGLBQ8NCG7 672 aa25.69■■□□□ 1.7
HOMER3-204ENST00000539827 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.69■■□□□ 1.7
HOMER3-204ENST00000539827 NYAP2Q9P242 653 aa25.69■■□□□ 1.7
HOMER3-204ENST00000539827 CNTNAP1P78357 1384 aa25.69■■□□□ 1.7
HOMER3-204ENST00000539827 A0A087WWV3 80 aa25.68■■□□□ 1.7
HOMER3-204ENST00000539827 M0R2N6 131 aa25.68■■□□□ 1.7
HOMER3-204ENST00000539827 TMEM179Q6ZVK1 233 aa25.68■■□□□ 1.7
HOMER3-204ENST00000539827 KCTD1Q719H9 257 aa25.68■■□□□ 1.7
HOMER3-204ENST00000539827 SIAH1Q8IUQ4 282 aa25.68■■□□□ 1.7
HOMER3-204ENST00000539827 MTMR14Q8NCE2 650 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms