RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 NMRK2Q9NPI5 230 aa18.73■□□□□ 0.59
TRAF3-204ENST00000539721 PAPPA2Q9BXP8 1791 aa18.73■□□□□ 0.59
TRAF3-204ENST00000539721 UBE2Q2LH0YL09 131 aa18.73■□□□□ 0.59
TRAF3-204ENST00000539721 SLC1A4P43007 532 aa18.73■□□□□ 0.59
TRAF3-204ENST00000539721 GPATCH4Q5T3I0 446 aaKnown RBP18.73■□□□□ 0.59
TRAF3-204ENST00000539721 MAP1SQ66K74 1059 aaPredicted RBP18.73■□□□□ 0.59
TRAF3-204ENST00000539721 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.73■□□□□ 0.59
TRAF3-204ENST00000539721 TNPO1Q92973 898 aaKnown RBP18.73■□□□□ 0.59
TRAF3-204ENST00000539721 AIFM3Q96NN9 605 aa18.73■□□□□ 0.59
TRAF3-204ENST00000539721 V9GY48 417 aaPredicted RBP18.73■□□□□ 0.59
TRAF3-204ENST00000539721 BAZ2BQ9UIF8 2168 aaKnown RBP18.72■□□□□ 0.59
TRAF3-204ENST00000539721 hCG_1642624A0A1W2PR95 340 aa18.72■□□□□ 0.59
TRAF3-204ENST00000539721 NDUFB10O96000 172 aa18.72■□□□□ 0.59
TRAF3-204ENST00000539721 NOL9Q5SY16 702 aaKnown RBP18.72■□□□□ 0.59
TRAF3-204ENST00000539721 KCTD1Q719H9 257 aa18.72■□□□□ 0.59
TRAF3-204ENST00000539721 LDHDQ86WU2 507 aa18.72■□□□□ 0.59
TRAF3-204ENST00000539721 FEZ1Q99689 392 aa18.72■□□□□ 0.59
TRAF3-204ENST00000539721 SPZ1Q9BXG8 430 aa18.72■□□□□ 0.59
TRAF3-204ENST00000539721 RBM27Q9P2N5 1060 aaKnown RBP18.72■□□□□ 0.59
TRAF3-204ENST00000539721 IREB2P48200 963 aaKnown RBP18.71■□□□□ 0.59
TRAF3-204ENST00000539721 MAP3K9P80192 1104 aa18.71■□□□□ 0.59
TRAF3-204ENST00000539721 GUCY1B3Q02153 619 aa18.71■□□□□ 0.59
TRAF3-204ENST00000539721 ZYXQ15942 572 aaKnown RBP18.71■□□□□ 0.59
TRAF3-204ENST00000539721 PIBF1Q8WXW3 757 aa18.71■□□□□ 0.59
TRAF3-204ENST00000539721 GMCL1Q96IK5 515 aa18.71■□□□□ 0.59
TRAF3-204ENST00000539721 UBA5Q9GZZ9 404 aa18.71■□□□□ 0.59
TRAF3-204ENST00000539721 CPVLQ9H3G5 476 aa18.71■□□□□ 0.59
TRAF3-204ENST00000539721 PHIPQ8WWQ0 1821 aa18.71■□□□□ 0.59
TRAF3-204ENST00000539721 F13A1P00488 732 aa18.7■□□□□ 0.58
TRAF3-204ENST00000539721 PTPRAP18433 802 aa18.7■□□□□ 0.58
TRAF3-204ENST00000539721 SMARCA1P28370 1054 aa18.7■□□□□ 0.58
TRAF3-204ENST00000539721 TRIM29Q14134 588 aa18.7■□□□□ 0.58
TRAF3-204ENST00000539721 TTLL12Q14166 644 aaPredicted RBP18.7■□□□□ 0.58
TRAF3-204ENST00000539721 SLC35G1Q2M3R5 365 aa18.7■□□□□ 0.58
TRAF3-204ENST00000539721 VCPKMTQ9H867 229 aa18.7■□□□□ 0.58
TRAF3-204ENST00000539721 AS3MTQ9HBK9 375 aa18.7■□□□□ 0.58
TRAF3-204ENST00000539721 CYTH3O43739 400 aa18.7■□□□□ 0.58
TRAF3-204ENST00000539721 PKN1Q16512 942 aa18.7■□□□□ 0.58
TRAF3-204ENST00000539721 OTUD7BQ6GQQ9 843 aa18.7■□□□□ 0.58
TRAF3-204ENST00000539721 SPICE1Q8N0Z3 855 aa18.7■□□□□ 0.58
TRAF3-204ENST00000539721 BMP3P12645 472 aa18.69■□□□□ 0.58
TRAF3-204ENST00000539721 TTBK2Q6IQ55 1244 aa18.69■□□□□ 0.58
TRAF3-204ENST00000539721 FBXO18Q8NFZ0 1043 aa18.69■□□□□ 0.58
TRAF3-204ENST00000539721 NUP88Q99567 741 aaPredicted RBP18.69■□□□□ 0.58
TRAF3-204ENST00000539721 VAT1LQ9HCJ6 419 aa18.69■□□□□ 0.58
TRAF3-204ENST00000539721 GJB4Q9NTQ9 266 aa18.69■□□□□ 0.58
TRAF3-204ENST00000539721 CSADQ9Y600 493 aa18.69■□□□□ 0.58
TRAF3-204ENST00000539721 VGLL4Q14135 290 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 KIAA1755Q5JYT7 1200 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 KRT40Q6A162 431 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.68■□□□□ 0.58
TRAF3-204ENST00000539721 FERMT3Q86UX7 667 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 RGS22Q8NE09 1264 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 RRP36Q96EU6 259 aaKnown RBP18.68■□□□□ 0.58
TRAF3-204ENST00000539721 WDR18Q9BV38 432 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 RIOX1Q9H6W3 641 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.68■□□□□ 0.58
TRAF3-204ENST00000539721 USP17L10C9JJH3 530 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 TRAF5O00463 557 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 SCG2P13521 617 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 XBP1P17861 261 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 SLC16A2P36021 539 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 PFKFB3Q16875 520 aaPredicted RBP18.68■□□□□ 0.58
TRAF3-204ENST00000539721 MCTP1Q6DN14 999 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 ARMC9Q7Z3E5 817 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 HOMER1Q86YM7 354 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 KIAA1683Q9H0B3 1180 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 SEC63Q9UGP8 760 aaKnown RBP18.68■□□□□ 0.58
TRAF3-204ENST00000539721 SNCAIPQ9Y6H5 919 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 ZHX2Q9Y6X8 837 aa18.68■□□□□ 0.58
TRAF3-204ENST00000539721 SPP2Q13103 211 aa18.67■□□□□ 0.58
TRAF3-204ENST00000539721 IKQ13123 557 aaPredicted RBP18.67■□□□□ 0.58
TRAF3-204ENST00000539721 MOB2Q70IA6 237 aa18.67■□□□□ 0.58
TRAF3-204ENST00000539721 ANKRD13AQ8IZ07 590 aa18.67■□□□□ 0.58
TRAF3-204ENST00000539721 ADGRF4Q8IZF3 695 aa18.67■□□□□ 0.58
TRAF3-204ENST00000539721 ZNF280CQ8ND82 737 aa18.67■□□□□ 0.58
TRAF3-204ENST00000539721 ZNF408Q9H9D4 720 aa18.67■□□□□ 0.58
TRAF3-204ENST00000539721 TMEM232C9JQI7 657 aa18.66■□□□□ 0.58
TRAF3-204ENST00000539721 USP14P54578 494 aa18.66■□□□□ 0.58
TRAF3-204ENST00000539721 MTMR2Q13614 643 aa18.66■□□□□ 0.58
TRAF3-204ENST00000539721 MAP3K11Q16584 847 aa18.66■□□□□ 0.58
TRAF3-204ENST00000539721 FAM83BQ5T0W9 1011 aa18.66■□□□□ 0.58
TRAF3-204ENST00000539721 PIGSQ96S52 555 aa18.66■□□□□ 0.58
TRAF3-204ENST00000539721 VPS54Q9P1Q0 977 aa18.66■□□□□ 0.58
TRAF3-204ENST00000539721 MYH15Q9Y2K3 1946 aa18.65■□□□□ 0.58
TRAF3-204ENST00000539721 FMR1Q06787 632 aaKnown RBP eCLIP18.65■□□□□ 0.58
TRAF3-204ENST00000539721 GBP4Q96PP9 640 aa18.65■□□□□ 0.58
TRAF3-204ENST00000539721 JMJD4Q9H9V9 463 aa18.65■□□□□ 0.58
TRAF3-204ENST00000539721 ATP6V1DQ9Y5K8 247 aa18.65■□□□□ 0.58
TRAF3-204ENST00000539721 TRIM75PA6NK02 468 aa18.65■□□□□ 0.58
TRAF3-204ENST00000539721 BACE1P56817 501 aa18.65■□□□□ 0.58
TRAF3-204ENST00000539721 RESTQ13127 1097 aa18.65■□□□□ 0.58
TRAF3-204ENST00000539721 FOXD4L6Q3SYB3 417 aaPredicted RBP18.65■□□□□ 0.58
TRAF3-204ENST00000539721 FOXD4L3Q6VB84 417 aaPredicted RBP18.65■□□□□ 0.58
TRAF3-204ENST00000539721 LPAR1Q92633 364 aa18.65■□□□□ 0.58
TRAF3-204ENST00000539721 GPKOWQ92917 476 aaPredicted RBP eCLIP18.65■□□□□ 0.58
TRAF3-204ENST00000539721 ZSCAN16Q9H4T2 348 aaPredicted RBP18.65■□□□□ 0.58
TRAF3-204ENST00000539721 ELP3Q9H9T3 547 aa18.65■□□□□ 0.58
TRAF3-204ENST00000539721 KCNJ14Q9UNX9 436 aa18.65■□□□□ 0.58
TRAF3-204ENST00000539721 MMP1P03956 469 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms