RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 EFCC1Q9HA90 598 aa18.57■□□□□ 0.56
RPAIN-206ENST00000539417 SENP2Q9HC62 589 aa18.57■□□□□ 0.56
RPAIN-206ENST00000539417 ERVK-9P63128 1117 aa18.56■□□□□ 0.56
RPAIN-206ENST00000539417 ERVK-24P63145 666 aa18.56■□□□□ 0.56
RPAIN-206ENST00000539417 LBX2Q6XYB7 198 aa18.56■□□□□ 0.56
RPAIN-206ENST00000539417 MB21D2Q8IYB1 491 aaPredicted RBP18.56■□□□□ 0.56
RPAIN-206ENST00000539417 TNS4Q8IZW8 715 aa18.56■□□□□ 0.56
RPAIN-206ENST00000539417 ZSCAN10Q96SZ4 725 aaPredicted RBP18.56■□□□□ 0.56
RPAIN-206ENST00000539417 CNNM2Q9H8M5 875 aa18.56■□□□□ 0.56
RPAIN-206ENST00000539417 GABRQQ9UN88 632 aa18.56■□□□□ 0.56
RPAIN-206ENST00000539417 COL11A1P12107 1806 aaPredicted RBP18.56■□□□□ 0.56
RPAIN-206ENST00000539417 TNKSO95271 1327 aa18.56■□□□□ 0.56
RPAIN-206ENST00000539417 FMNL1O95466 1100 aaPredicted RBP18.55■□□□□ 0.56
RPAIN-206ENST00000539417 TOP1P11387 765 aaKnown RBP18.55■□□□□ 0.56
RPAIN-206ENST00000539417 SEC23AQ15436 765 aa18.55■□□□□ 0.56
RPAIN-206ENST00000539417 KCTD1Q719H9 257 aa18.55■□□□□ 0.56
RPAIN-206ENST00000539417 GPHNQ9NQX3 736 aaPredicted RBP18.55■□□□□ 0.56
RPAIN-206ENST00000539417 SYNPO2Q9UMS6 1093 aa18.55■□□□□ 0.56
RPAIN-206ENST00000539417 BMP3P12645 472 aa18.54■□□□□ 0.56
RPAIN-206ENST00000539417 GPRC5AQ8NFJ5 357 aa18.54■□□□□ 0.56
RPAIN-206ENST00000539417 PPP1R9AQ9ULJ8 1098 aa18.54■□□□□ 0.56
RPAIN-206ENST00000539417 ADAMTS5Q9UNA0 930 aa18.54■□□□□ 0.56
RPAIN-206ENST00000539417 RABGAP1Q9Y3P9 1069 aa18.54■□□□□ 0.56
RPAIN-206ENST00000539417 DOCK3Q8IZD9 2030 aa18.54■□□□□ 0.56
RPAIN-206ENST00000539417 KIF22Q14807 665 aa18.53■□□□□ 0.56
RPAIN-206ENST00000539417 TMEM132BQ14DG7 1078 aa18.53■□□□□ 0.56
RPAIN-206ENST00000539417 ADCK5Q3MIX3 580 aa18.53■□□□□ 0.56
RPAIN-206ENST00000539417 TTBK2Q6IQ55 1244 aa18.53■□□□□ 0.56
RPAIN-206ENST00000539417 IQCA1Q86XH1 822 aa18.53■□□□□ 0.56
RPAIN-206ENST00000539417 DGKHQ86XP1 1220 aa18.53■□□□□ 0.56
RPAIN-206ENST00000539417 REPS2Q8NFH8 660 aa18.53■□□□□ 0.56
RPAIN-206ENST00000539417 NCOA7Q8NI08 942 aa18.53■□□□□ 0.56
RPAIN-206ENST00000539417 ANKS1AQ92625 1134 aa18.53■□□□□ 0.56
RPAIN-206ENST00000539417 GMCL1Q96IK5 515 aa18.53■□□□□ 0.56
RPAIN-206ENST00000539417 TTC14Q96N46 770 aa18.53■□□□□ 0.56
RPAIN-206ENST00000539417 HOXC10Q9NYD6 342 aa18.53■□□□□ 0.56
RPAIN-206ENST00000539417 PTPN22Q9Y2R2 807 aa18.53■□□□□ 0.56
RPAIN-206ENST00000539417 FRMPD2Q68DX3 1309 aaPredicted RBP18.53■□□□□ 0.56
RPAIN-206ENST00000539417 PLXNB2O15031 1838 aa18.53■□□□□ 0.56
RPAIN-206ENST00000539417 TMEM232C9JQI7 657 aa18.52■□□□□ 0.56
RPAIN-206ENST00000539417 SLC1A4P43007 532 aa18.52■□□□□ 0.56
RPAIN-206ENST00000539417 PRKCZQ05513 592 aa18.52■□□□□ 0.56
RPAIN-206ENST00000539417 TRDNQ13061 729 aa18.52■□□□□ 0.56
RPAIN-206ENST00000539417 SLF1Q9BQI6 1058 aa18.52■□□□□ 0.56
RPAIN-206ENST00000539417 PTCH2Q9Y6C5 1203 aa18.52■□□□□ 0.56
RPAIN-206ENST00000539417 VWA5AO00534 786 aa18.52■□□□□ 0.55
RPAIN-206ENST00000539417 PDHBP11177 359 aa18.52■□□□□ 0.55
RPAIN-206ENST00000539417 FCGRTP55899 365 aa18.52■□□□□ 0.55
RPAIN-206ENST00000539417 SNAP25P60880 206 aa18.52■□□□□ 0.55
RPAIN-206ENST00000539417 PPP4R3BQ5MIZ7 849 aa18.52■□□□□ 0.55
RPAIN-206ENST00000539417 RALYLQ86SE5 291 aaKnown RBP18.52■□□□□ 0.55
RPAIN-206ENST00000539417 KIFC2Q96AC6 838 aa18.52■□□□□ 0.55
RPAIN-206ENST00000539417 UBAC1Q9BSL1 405 aa18.52■□□□□ 0.55
RPAIN-206ENST00000539417 ISY1Q9ULR0 285 aaKnown RBP18.52■□□□□ 0.55
RPAIN-206ENST00000539417 GTF3C3Q9Y5Q9 886 aa18.52■□□□□ 0.55
RPAIN-206ENST00000539417 MYPNQ86TC9 1320 aa18.51■□□□□ 0.55
RPAIN-206ENST00000539417 TNPO2O14787 897 aaKnown RBP18.51■□□□□ 0.55
RPAIN-206ENST00000539417 SLC16A2P36021 539 aa18.51■□□□□ 0.55
RPAIN-206ENST00000539417 FBXO46Q6PJ61 603 aaPredicted RBP18.51■□□□□ 0.55
RPAIN-206ENST00000539417 PNMA1Q8ND90 353 aa18.51■□□□□ 0.55
RPAIN-206ENST00000539417 GTF3C2Q8WUA4 911 aaPredicted RBP18.51■□□□□ 0.55
RPAIN-206ENST00000539417 KCNB2Q92953 911 aa18.51■□□□□ 0.55
RPAIN-206ENST00000539417 MOV10L1Q9BXT6 1211 aaKnown RBP18.51■□□□□ 0.55
RPAIN-206ENST00000539417 LRRC2Q9BYS8 371 aa18.51■□□□□ 0.55
RPAIN-206ENST00000539417 CPVLQ9H3G5 476 aa18.51■□□□□ 0.55
RPAIN-206ENST00000539417 GPCPD1Q9NPB8 672 aa18.51■□□□□ 0.55
RPAIN-206ENST00000539417 SRRDQ9UH36 339 aa18.51■□□□□ 0.55
RPAIN-206ENST00000539417 FEM1BQ9UK73 627 aa18.51■□□□□ 0.55
RPAIN-206ENST00000539417 IFIT3O14879 490 aaKnown RBP18.5■□□□□ 0.55
RPAIN-206ENST00000539417 SEC24BO95487 1268 aa18.5■□□□□ 0.55
RPAIN-206ENST00000539417 GOLGA8HP0CJ92 632 aa18.5■□□□□ 0.55
RPAIN-206ENST00000539417 SNHG28P0DPA3 235 aa18.5■□□□□ 0.55
RPAIN-206ENST00000539417 CPA1P15085 419 aa18.5■□□□□ 0.55
RPAIN-206ENST00000539417 TAL1P17542 331 aaPredicted RBP18.5■□□□□ 0.55
RPAIN-206ENST00000539417 HSPA4P34932 840 aa18.5■□□□□ 0.55
RPAIN-206ENST00000539417 NT5C2P49902 561 aa18.5■□□□□ 0.55
RPAIN-206ENST00000539417 PLS1Q14651 629 aa18.5■□□□□ 0.55
RPAIN-206ENST00000539417 CCDC96Q2M329 555 aa18.5■□□□□ 0.55
RPAIN-206ENST00000539417 PRPF38AQ8NAV1 312 aaKnown RBP18.5■□□□□ 0.55
RPAIN-206ENST00000539417 IGDCC4Q8TDY8 1250 aa18.5■□□□□ 0.55
RPAIN-206ENST00000539417 DCAF4Q8WV16 495 aa18.5■□□□□ 0.55
RPAIN-206ENST00000539417 ABHD8Q96I13 439 aa18.5■□□□□ 0.55
RPAIN-206ENST00000539417 USP26Q9BXU7 913 aa18.5■□□□□ 0.55
RPAIN-206ENST00000539417 SPATC1LQ9H0A9 340 aa18.5■□□□□ 0.55
RPAIN-206ENST00000539417 GJD2Q9UKL4 321 aa18.5■□□□□ 0.55
RPAIN-206ENST00000539417 ZNF214Q9UL59 606 aaPredicted RBP18.5■□□□□ 0.55
RPAIN-206ENST00000539417 HPS5Q9UPZ3 1129 aa18.5■□□□□ 0.55
RPAIN-206ENST00000539417 PRC1O43663 620 aa18.49■□□□□ 0.55
RPAIN-206ENST00000539417 IFIT1BQ5T764 474 aaKnown RBP18.49■□□□□ 0.55
RPAIN-206ENST00000539417 TCEANC2Q96MN5 208 aa18.49■□□□□ 0.55
RPAIN-206ENST00000539417 KAT14Q9H8E8 782 aa18.49■□□□□ 0.55
RPAIN-206ENST00000539417 SNX14Q9Y5W7 946 aa18.49■□□□□ 0.55
RPAIN-206ENST00000539417 REC8O95072 547 aa18.48■□□□□ 0.55
RPAIN-206ENST00000539417 FLT3LGP49771 235 aa18.48■□□□□ 0.55
RPAIN-206ENST00000539417 STAT2P52630 851 aa18.48■□□□□ 0.55
RPAIN-206ENST00000539417 ZNF543Q08ER8 600 aa18.48■□□□□ 0.55
RPAIN-206ENST00000539417 PKN2Q16513 984 aaKnown RBP18.48■□□□□ 0.55
RPAIN-206ENST00000539417 TSGA10IPQ3SY00 556 aa18.48■□□□□ 0.55
RPAIN-206ENST00000539417 GPR142Q7Z601 462 aa18.48■□□□□ 0.55
RPAIN-206ENST00000539417 SLC38A10Q9HBR0 1119 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms