RNA–Protein interactions for RNA: ENST00000539276.6

ATP2A2-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-204ENST00000539276 PANX2Q96RD6 677 aa17.61■□□□□ 0.41
ATP2A2-204ENST00000539276 SLAIN2Q9P270 581 aa17.61■□□□□ 0.41
ATP2A2-204ENST00000539276 BCCIPQ9P287 314 aaKnown RBP eCLIP17.61■□□□□ 0.41
ATP2A2-204ENST00000539276 TMCO5BA8MYB1 307 aa17.61■□□□□ 0.41
ATP2A2-204ENST00000539276 SUSD4Q5VX71 490 aa17.61■□□□□ 0.41
ATP2A2-204ENST00000539276 BLIDQ8IZY5 108 aa17.61■□□□□ 0.41
ATP2A2-204ENST00000539276 BAZ2BQ9UIF8 2168 aaKnown RBP17.61■□□□□ 0.41
ATP2A2-204ENST00000539276 GOLGA8HP0CJ92 632 aa17.61■□□□□ 0.41
ATP2A2-204ENST00000539276 KCNJ6P48051 423 aa17.61■□□□□ 0.41
ATP2A2-204ENST00000539276 SPTY2D1Q68D10 685 aaPredicted RBP17.61■□□□□ 0.41
ATP2A2-204ENST00000539276 DHX37Q8IY37 1157 aaKnown RBP17.61■□□□□ 0.41
ATP2A2-204ENST00000539276 AFAP1L1Q8TED9 768 aa17.61■□□□□ 0.41
ATP2A2-204ENST00000539276 IFT81Q8WYA0 676 aa17.61■□□□□ 0.41
ATP2A2-204ENST00000539276 MRFAP1Q9Y605 127 aa17.61■□□□□ 0.41
ATP2A2-204ENST00000539276 IBSPP21815 317 aaPredicted RBP17.6■□□□□ 0.41
ATP2A2-204ENST00000539276 TNNI2P48788 182 aa17.6■□□□□ 0.41
ATP2A2-204ENST00000539276 TYW1BQ6NUM6 668 aa17.6■□□□□ 0.41
ATP2A2-204ENST00000539276 EPB41L4AQ9HCS5 686 aaPredicted RBP17.6■□□□□ 0.41
ATP2A2-204ENST00000539276 SLIT1O75093 1534 aa17.6■□□□□ 0.41
ATP2A2-204ENST00000539276 ATP8B1O43520 1251 aa17.6■□□□□ 0.41
ATP2A2-204ENST00000539276 MAATS1Q7Z4T9 603 aa17.6■□□□□ 0.41
ATP2A2-204ENST00000539276 SETDB2Q96T68 719 aa17.6■□□□□ 0.41
ATP2A2-204ENST00000539276 C6orf50Q9HD87 102 aa17.6■□□□□ 0.41
ATP2A2-204ENST00000539276 ADAM21Q9UKJ8 722 aa17.6■□□□□ 0.41
ATP2A2-204ENST00000539276 CUL4BQ13620 913 aa17.6■□□□□ 0.41
ATP2A2-204ENST00000539276 SPATA31A3Q5VYP0 1347 aa17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 B4DLN1 442 aa17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 ZEB2O60315 1214 aa17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 PARP1P09874 1014 aaKnown RBP17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 ANKRD13CQ8N6S4 541 aa17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 STAG1Q8WVM7 1258 aa17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 NMT2O60551 498 aa17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 HSF2BPO75031 334 aa17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 ST5P78524 1137 aa17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 ZSCAN29Q8IWY8 852 aaPredicted RBP17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 SECISBP2LQ93073 1101 aaKnown RBP17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 STK36Q9NRP7 1315 aa17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 H7C1D1 291 aa17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 SND1Q7KZF4 910 aaKnown RBP eCLIP17.59■□□□□ 0.412e-7■■■□□ 15.3
ATP2A2-204ENST00000539276 C2CD5Q86YS7 1000 aa17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 PNMA1Q8ND90 353 aa17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 FAM76AQ8TAV0 307 aa17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 HPSEQ9Y251 543 aa17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 MEGF6O75095 1541 aa17.59■□□□□ 0.41
ATP2A2-204ENST00000539276 LDHBP07195 334 aaKnown RBP17.58■□□□□ 0.41
ATP2A2-204ENST00000539276 H2AFXP16104 143 aaPredicted RBP17.58■□□□□ 0.41
ATP2A2-204ENST00000539276 TRIM28Q13263 835 aaKnown RBP17.58■□□□□ 0.41
ATP2A2-204ENST00000539276 ENAHQ8N8S7 591 aaPredicted RBP17.58■□□□□ 0.41
ATP2A2-204ENST00000539276 HAUS4Q9H6D7 363 aa17.58■□□□□ 0.41
ATP2A2-204ENST00000539276 TRIM49BA6NDI0 452 aa17.58■□□□□ 0.4
ATP2A2-204ENST00000539276 LDHCP07864 332 aa17.58■□□□□ 0.4
ATP2A2-204ENST00000539276 CDR1P51861 262 aa17.58■□□□□ 0.4
ATP2A2-204ENST00000539276 CABP7Q86V35 215 aa17.58■□□□□ 0.4
ATP2A2-204ENST00000539276 CYP27A1Q02318 531 aa17.58■□□□□ 0.4
ATP2A2-204ENST00000539276 RNF187Q5TA31 235 aaPredicted RBP17.58■□□□□ 0.4
ATP2A2-204ENST00000539276 RAD9BQ6WBX8 426 aa17.58■□□□□ 0.4
ATP2A2-204ENST00000539276 MICALL1Q8N3F8 863 aa17.58■□□□□ 0.4
ATP2A2-204ENST00000539276 F8W031 263 aaPredicted RBP17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 EIF6P56537 245 aaKnown RBP17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 MAP3K9P80192 1104 aa17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 ZNF579Q8NAF0 562 aaKnown RBP17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 CSF1RP07333 972 aa17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 PLA2G4AP47712 749 aa17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 PICALMQ13492 652 aa17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 SPAG5Q96R06 1193 aa17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 FHOD1Q9Y613 1164 aa17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 ANKRD65E5RJM6 399 aa17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 C6orf229H3BNL8 230 aa17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 IL6STP40189 918 aaPredicted RBP17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 RRP36Q96EU6 259 aaKnown RBP17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 MAP3K14Q99558 947 aa17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 GNA11P29992 359 aa17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 FXR1P51114 621 aaKnown RBP eCLIP17.57■□□□□ 0.42e-6■■■□□ 18.7
ATP2A2-204ENST00000539276 KCNQ4P56696 695 aa17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 MRPS25P82663 173 aaKnown RBP17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 KRT79Q5XKE5 535 aa17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 MAPKAPK5Q8IW41 473 aa17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 NLRC4Q9NPP4 1024 aa17.57■□□□□ 0.4
ATP2A2-204ENST00000539276 GOLGA6CA6NDK9 693 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 TRAF5O00463 557 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 PRPF3O43395 683 aaKnown RBP17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 SRGAP2O75044 1071 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 NDUFA10O95299 355 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 GOLGA6DP0CG33 693 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 TECP42680 631 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 CASP8Q14790 479 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 ALX1Q15699 326 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 SV2BQ7L1I2 683 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 TUBGCP2Q9BSJ2 902 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 IFIH1Q9BYX4 1025 aaKnown RBP17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 GOLGA6AQ9NYA3 693 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 AKAP12Q02952 1782 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 GOLGA6BA6NDN3 693 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 DNM2P50570 870 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 FAM204AQ9H8W3 233 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 C1orf167Q5SNV9 1468 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 EBAG9O00559 213 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 MAGEA1P43355 309 aa17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 TOB1P50616 345 aaPredicted RBP17.56■□□□□ 0.4
ATP2A2-204ENST00000539276 RRAGAQ7L523 313 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms