RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 ARHGAP29Q52LW3 1261 aa7.89□□□□□ -1.15
PROM1-219ENST00000539194 DACH1Q9UI36 760 aa7.89□□□□□ -1.15
PROM1-219ENST00000539194 MAD2L2Q9UI95 211 aa7.89□□□□□ -1.15
PROM1-219ENST00000539194 ZC3H4Q9UPT8 1303 aaKnown RBP7.89□□□□□ -1.15
PROM1-219ENST00000539194 CYTH3O43739 400 aa7.89□□□□□ -1.15
PROM1-219ENST00000539194 SART3Q15020 963 aaKnown RBP7.89□□□□□ -1.15
PROM1-219ENST00000539194 AMIGO3Q86WK7 504 aa7.89□□□□□ -1.15
PROM1-219ENST00000539194 FAM177A1Q8N128 213 aaPredicted RBP7.89□□□□□ -1.15
PROM1-219ENST00000539194 RABGGTAQ92696 567 aa7.89□□□□□ -1.15
PROM1-219ENST00000539194 CELF1Q92879 486 aaKnown RBP7.89□□□□□ -1.15
PROM1-219ENST00000539194 DHX58Q96C10 678 aa7.89□□□□□ -1.15
PROM1-219ENST00000539194 IQSEC3Q9UPP2 1182 aaPredicted RBP7.89□□□□□ -1.15
PROM1-219ENST00000539194 ZNF330Q9Y3S2 320 aaPredicted RBP7.89□□□□□ -1.15
PROM1-219ENST00000539194 SYNRGQ9UMZ2 1314 aa7.89□□□□□ -1.15
PROM1-219ENST00000539194 PTGDRQ13258 359 aa7.89□□□□□ -1.15
PROM1-219ENST00000539194 MEA1Q16626 185 aa7.89□□□□□ -1.15
PROM1-219ENST00000539194 WDR59Q6PJI9 974 aa7.89□□□□□ -1.15
PROM1-219ENST00000539194 CCDC51Q96ER9 411 aa7.89□□□□□ -1.15
PROM1-219ENST00000539194 PURBQ96QR8 312 aaKnown RBP7.89□□□□□ -1.15
PROM1-219ENST00000539194 DNAJC7Q99615 494 aa7.89□□□□□ -1.15
PROM1-219ENST00000539194 CARD6Q9BX69 1037 aa7.89□□□□□ -1.15
PROM1-219ENST00000539194 EPC1Q9H2F5 836 aa7.89□□□□□ -1.15
PROM1-219ENST00000539194 KBTBD4Q9NVX7 518 aa7.89□□□□□ -1.15
PROM1-219ENST00000539194 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.89□□□□□ -1.15
PROM1-219ENST00000539194 KAT6BQ8WYB5 2073 aa7.88□□□□□ -1.15
PROM1-219ENST00000539194 AKR1B15C9JRZ8 316 aaPredicted RBP7.88□□□□□ -1.15
PROM1-219ENST00000539194 BMS1Q14692 1282 aaKnown RBP7.88□□□□□ -1.15
PROM1-219ENST00000539194 KRT31Q15323 416 aa7.88□□□□□ -1.15
PROM1-219ENST00000539194 C15orf52Q6ZUT6 534 aaKnown RBP7.88□□□□□ -1.15
PROM1-219ENST00000539194 ATP8A2Q9NTI2 1148 aa7.88□□□□□ -1.15
PROM1-219ENST00000539194 ABHD10Q9NUJ1 306 aa7.88□□□□□ -1.15
PROM1-219ENST00000539194 NIP7Q9Y221 180 aaKnown RBP eCLIP7.88□□□□□ -1.15
PROM1-219ENST00000539194 V9GY48 417 aaPredicted RBP7.88□□□□□ -1.15
PROM1-219ENST00000539194 GTF2E1P29083 439 aaPredicted RBP7.88□□□□□ -1.15
PROM1-219ENST00000539194 ATP6V1AP38606 617 aa7.88□□□□□ -1.15
PROM1-219ENST00000539194 IGHMBP2P38935 993 aaKnown RBP7.88□□□□□ -1.15
PROM1-219ENST00000539194 PMS1P54277 932 aaKnown RBP7.88□□□□□ -1.15
PROM1-219ENST00000539194 KCNB1Q14721 858 aa7.88□□□□□ -1.15
PROM1-219ENST00000539194 TTC38Q5R3I4 469 aa7.88□□□□□ -1.15
PROM1-219ENST00000539194 ZNF658Q5TYW1 1059 aaPredicted RBP7.88□□□□□ -1.15
PROM1-219ENST00000539194 ADSSL1Q8N142 457 aa7.88□□□□□ -1.15
PROM1-219ENST00000539194 HOOK1Q9UJC3 728 aaKnown RBP7.88□□□□□ -1.15
PROM1-219ENST00000539194 ZHX1Q9UKY1 873 aaPredicted RBP7.88□□□□□ -1.15
PROM1-219ENST00000539194 SCG2P13521 617 aa7.88□□□□□ -1.15
PROM1-219ENST00000539194 TCP11X2Q5H9J9 407 aa7.88□□□□□ -1.15
PROM1-219ENST00000539194 BEND6Q5SZJ8 279 aaPredicted RBP7.88□□□□□ -1.15
PROM1-219ENST00000539194 TXNRD3Q86VQ6 643 aa7.88□□□□□ -1.15
PROM1-219ENST00000539194 SMYD4Q8IYR2 804 aaPredicted RBP7.88□□□□□ -1.15
PROM1-219ENST00000539194 MYH4Q9Y623 1939 aa7.88□□□□□ -1.15
PROM1-219ENST00000539194 TULP2O00295 520 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 SAFBQ15424 915 aaKnown RBP eCLIP7.87□□□□□ -1.15
PROM1-219ENST00000539194 C12orf60Q5U649 245 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 ZSCAN29Q8IWY8 852 aaPredicted RBP7.87□□□□□ -1.15
PROM1-219ENST00000539194 DESI2Q9BSY9 194 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 PARD6BQ9BYG5 372 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 GTPBP6O43824 516 aaPredicted RBP7.87□□□□□ -1.15
PROM1-219ENST00000539194 CASP14P31944 242 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 LONP1P36776 959 aaKnown RBP7.87□□□□□ -1.15
PROM1-219ENST00000539194 IFIT1BQ5T764 474 aaKnown RBP7.87□□□□□ -1.15
PROM1-219ENST00000539194 TBC1D9BQ66K14 1250 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 SLC51AQ86UW1 340 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 PLIN4Q96Q06 1357 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 A0A1W2PQC6 194 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 hCG_1642624A0A1W2PR95 340 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 PALM3A6NDB9 673 aaPredicted RBP7.87□□□□□ -1.15
PROM1-219ENST00000539194 USP17L12C9JPN9 530 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 USP17L21D6R901 530 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 NKRFO15226 690 aaKnown RBP eCLIP7.87□□□□□ -1.15
PROM1-219ENST00000539194 RHOBTB3O94955 611 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 TXLNAP40222 546 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 GRM4Q14833 912 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 HSP90AA4PQ58FG1 418 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 RC3H1Q5TC82 1133 aaKnown RBP7.87□□□□□ -1.15
PROM1-219ENST00000539194 TTI2Q6NXR4 508 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 DGKHQ86XP1 1220 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 GIMAP8Q8ND71 665 aaPredicted RBP7.87□□□□□ -1.15
PROM1-219ENST00000539194 CTAGE1Q96RT6 745 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 DUSP9Q99956 384 aaKnown RBP7.87□□□□□ -1.15
PROM1-219ENST00000539194 UBAC1Q9BSL1 405 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 CCSER1Q9C0I3 900 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 LRP2BPQ9P2M1 347 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 PCDHA6Q9UN73 950 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 PCDHA8Q9Y5H6 950 aa7.87□□□□□ -1.15
PROM1-219ENST00000539194 KCNQ2O43526 872 aa7.86□□□□□ -1.15
PROM1-219ENST00000539194 SEC31AO94979 1220 aaKnown RBP7.86□□□□□ -1.15
PROM1-219ENST00000539194 TPM1P09493 284 aa7.86□□□□□ -1.15
PROM1-219ENST00000539194 CYP2D6P10635 497 aa7.86□□□□□ -1.15
PROM1-219ENST00000539194 PRPHP41219 470 aa7.86□□□□□ -1.15
PROM1-219ENST00000539194 PRCPP42785 496 aa7.86□□□□□ -1.15
PROM1-219ENST00000539194 PPP4CP60510 307 aa7.86□□□□□ -1.15
PROM1-219ENST00000539194 PPP2R3AQ06190 1150 aa7.86□□□□□ -1.15
PROM1-219ENST00000539194 EHHADHQ08426 723 aa7.86□□□□□ -1.15
PROM1-219ENST00000539194 CNNM4Q6P4Q7 775 aa7.86□□□□□ -1.15
PROM1-219ENST00000539194 ZNF572Q7Z3I7 529 aaPredicted RBP7.86□□□□□ -1.15
PROM1-219ENST00000539194 IGSF22Q8N9C0 903 aa7.86□□□□□ -1.15
PROM1-219ENST00000539194 PNKPQ96T60 521 aa7.86□□□□□ -1.15
PROM1-219ENST00000539194 ARPP21Q9UBL0 812 aaPredicted RBP7.86□□□□□ -1.15
PROM1-219ENST00000539194 CCDC151A5D8V7 595 aa7.86□□□□□ -1.15
PROM1-219ENST00000539194 STXBP3O00186 592 aa7.86□□□□□ -1.15
PROM1-219ENST00000539194 PRDX5P30044 214 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms