RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 KCNA3P22001 575 aa16.95■□□□□ 0.3
ATL3-203ENST00000538786 GRIN1Q05586 938 aa16.95■□□□□ 0.3
ATL3-203ENST00000538786 NOM1Q5C9Z4 860 aaKnown RBP16.95■□□□□ 0.3
ATL3-203ENST00000538786 PPP4R3BQ5MIZ7 849 aa16.95■□□□□ 0.3
ATL3-203ENST00000538786 KRBA2Q6ZNG9 492 aa16.95■□□□□ 0.3
ATL3-203ENST00000538786 RASGRP2Q7LDG7 609 aa16.95■□□□□ 0.3
ATL3-203ENST00000538786 HEATR3Q7Z4Q2 680 aa16.95■□□□□ 0.3
ATL3-203ENST00000538786 FERMT2Q96AC1 680 aa16.95■□□□□ 0.3
ATL3-203ENST00000538786 FAM198AQ9UFP1 575 aa16.95■□□□□ 0.3
ATL3-203ENST00000538786 USP17L5A8MUK1 530 aa16.94■□□□□ 0.3
ATL3-203ENST00000538786 PDHBP11177 359 aa16.94■□□□□ 0.3
ATL3-203ENST00000538786 DPEP1P16444 411 aa16.94■□□□□ 0.3
ATL3-203ENST00000538786 CACNB3P54284 484 aa16.94■□□□□ 0.3
ATL3-203ENST00000538786 SPECC1Q5M775 1068 aa16.94■□□□□ 0.3
ATL3-203ENST00000538786 TYW1BQ6NUM6 668 aa16.94■□□□□ 0.3
ATL3-203ENST00000538786 RRP36Q96EU6 259 aaKnown RBP16.94■□□□□ 0.3
ATL3-203ENST00000538786 PI4KBQ9UBF8 816 aa16.94■□□□□ 0.3
ATL3-203ENST00000538786 M0R2N6 131 aa16.94■□□□□ 0.3
ATL3-203ENST00000538786 SNHG28P0DPA3 235 aa16.94■□□□□ 0.3
ATL3-203ENST00000538786 LONRF3Q496Y0 759 aa16.94■□□□□ 0.3
ATL3-203ENST00000538786 ASPRV1Q53RT3 343 aa16.94■□□□□ 0.3
ATL3-203ENST00000538786 CNNM3Q8NE01 707 aa16.94■□□□□ 0.3
ATL3-203ENST00000538786 CCDC12Q8WUD4 166 aaPredicted RBP16.94■□□□□ 0.3
ATL3-203ENST00000538786 CSRNP2Q9H175 543 aa16.94■□□□□ 0.3
ATL3-203ENST00000538786 CLIP2Q9UDT6 1046 aa16.94■□□□□ 0.3
ATL3-203ENST00000538786 TUBE1Q9UJT0 475 aa16.94■□□□□ 0.3
ATL3-203ENST00000538786 GOLGA6L19H0YKK7 550 aa16.93■□□□□ 0.3
ATL3-203ENST00000538786 WNT7AO00755 349 aa16.93■□□□□ 0.3
ATL3-203ENST00000538786 CLCN1P35523 988 aa16.93■□□□□ 0.3
ATL3-203ENST00000538786 NLRP12P59046 1061 aa16.93■□□□□ 0.3
ATL3-203ENST00000538786 ATP2C1P98194 919 aaPredicted RBP16.93■□□□□ 0.3
ATL3-203ENST00000538786 TCP10Q12799 353 aa16.93■□□□□ 0.3
ATL3-203ENST00000538786 ZNF174Q15697 407 aa16.93■□□□□ 0.3
ATL3-203ENST00000538786 RIOX1Q9H6W3 641 aa16.93■□□□□ 0.3
ATL3-203ENST00000538786 SEC63Q9UGP8 760 aaKnown RBP16.93■□□□□ 0.3
ATL3-203ENST00000538786 HOOK1Q9UJC3 728 aaKnown RBP16.93■□□□□ 0.3
ATL3-203ENST00000538786 A0A087WWV3 80 aa16.92■□□□□ 0.3
ATL3-203ENST00000538786 DDTLA6NHG4 134 aaPredicted RBP16.92■□□□□ 0.3
ATL3-203ENST00000538786 ADAMTS3O15072 1205 aa16.92■□□□□ 0.3
ATL3-203ENST00000538786 CFAP100Q494V2 611 aa16.92■□□□□ 0.3
ATL3-203ENST00000538786 LRRC47Q8N1G4 583 aaKnown RBP16.92■□□□□ 0.3
ATL3-203ENST00000538786 BPIFA3Q9BQP9 254 aa16.92■□□□□ 0.3
ATL3-203ENST00000538786 VPS33BQ9H267 617 aa16.92■□□□□ 0.3
ATL3-203ENST00000538786 CPVLQ9H3G5 476 aa16.92■□□□□ 0.3
ATL3-203ENST00000538786 DNAJC18Q9H819 358 aa16.92■□□□□ 0.3
ATL3-203ENST00000538786 ENTPD3O75355 529 aa16.92■□□□□ 0.3
ATL3-203ENST00000538786 MSNP26038 577 aaKnown RBP16.92■□□□□ 0.3
ATL3-203ENST00000538786 EIF6P56537 245 aaKnown RBP16.92■□□□□ 0.3
ATL3-203ENST00000538786 PTGDRQ13258 359 aa16.92■□□□□ 0.3
ATL3-203ENST00000538786 DPCR1Q3MIW9 517 aa16.92■□□□□ 0.3
ATL3-203ENST00000538786 SH3BP5LQ7L8J4 393 aa16.92■□□□□ 0.3
ATL3-203ENST00000538786 METTL16Q86W50 562 aaKnown RBP16.92■□□□□ 0.3
ATL3-203ENST00000538786 FOXP4Q8IVH2 680 aaPredicted RBP16.92■□□□□ 0.3
ATL3-203ENST00000538786 DHX40Q8IX18 779 aaKnown RBP16.92■□□□□ 0.3
ATL3-203ENST00000538786 ZMYND12Q9H0C1 365 aa16.92■□□□□ 0.3
ATL3-203ENST00000538786 PCDHA6Q9UN73 950 aa16.92■□□□□ 0.3
ATL3-203ENST00000538786 PCDHA8Q9Y5H6 950 aa16.92■□□□□ 0.3
ATL3-203ENST00000538786 CCDC194A0A1B0GVG4 234 aa16.91■□□□□ 0.3
ATL3-203ENST00000538786 BECN2A8MW95 431 aa16.91■□□□□ 0.3
ATL3-203ENST00000538786 hCG_1984214I3L0E3 225 aa16.91■□□□□ 0.3
ATL3-203ENST00000538786 MPHOSPH10O00566 681 aaKnown RBP16.91■□□□□ 0.3
ATL3-203ENST00000538786 RSBN1LQ6PCB5 846 aaPredicted RBP16.91■□□□□ 0.3
ATL3-203ENST00000538786 CLEC10AQ8IUN9 316 aa16.91■□□□□ 0.3
ATL3-203ENST00000538786 LARGE2Q8N3Y3 721 aa16.91■□□□□ 0.3
ATL3-203ENST00000538786 ZNF713Q8N859 430 aaPredicted RBP16.91■□□□□ 0.3
ATL3-203ENST00000538786 ZKSCAN5Q9Y2L8 839 aa16.91■□□□□ 0.3
ATL3-203ENST00000538786 POLR2DO15514 142 aaKnown RBP16.9■□□□□ 0.3
ATL3-203ENST00000538786 NAPAP54920 295 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 MDM2Q00987 491 aaPredicted RBP16.9■□□□□ 0.3
ATL3-203ENST00000538786 ZNF543Q08ER8 600 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 PNOCQ13519 176 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 SOGA3Q5TF21 947 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 TATDN1Q6P1N9 297 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 SARM1Q6SZW1 724 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 HOMER1Q86YM7 354 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 ZSCAN29Q8IWY8 852 aaPredicted RBP16.9■□□□□ 0.3
ATL3-203ENST00000538786 PRMT6Q96LA8 375 aaPredicted RBP16.9■□□□□ 0.3
ATL3-203ENST00000538786 PIGSQ96S52 555 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 TDRD3Q9H7E2 651 aaKnown RBP16.9■□□□□ 0.3
ATL3-203ENST00000538786 FRMPD2Q68DX3 1309 aaPredicted RBP16.9■□□□□ 0.3
ATL3-203ENST00000538786 ATRNL1Q5VV63 1379 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 BIN1O00499 593 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 VIL1P09327 827 aaKnown RBP16.9■□□□□ 0.3
ATL3-203ENST00000538786 GNA11P29992 359 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 CERKLQ49MI3 558 aaPredicted RBP16.9■□□□□ 0.3
ATL3-203ENST00000538786 KANK3Q6NY19 840 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 PLA2G4DQ86XP0 818 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 CCDC125Q86Z20 511 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 TRIM34Q9BYJ4 488 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 UBA5Q9GZZ9 404 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 VAT1LQ9HCJ6 419 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 C6orf50Q9HD87 102 aa16.9■□□□□ 0.3
ATL3-203ENST00000538786 ZNF277Q9NRM2 450 aaPredicted RBP16.9■□□□□ 0.3
ATL3-203ENST00000538786 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.9■□□□□ 0.3
ATL3-203ENST00000538786 COL2A1P02458 1487 aaPredicted RBP16.9■□□□□ 0.3
ATL3-203ENST00000538786 ESYT2A0FGR8 921 aa16.89■□□□□ 0.29
ATL3-203ENST00000538786 MCM7P33993 719 aa16.89■□□□□ 0.29
ATL3-203ENST00000538786 ZNF75DP51815 510 aa16.89■□□□□ 0.29
ATL3-203ENST00000538786 TGFB2P61812 414 aa16.89■□□□□ 0.29
ATL3-203ENST00000538786 ARL6IP4Q66PJ3 421 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms