RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 SPC24Q8NBT2 197 aa16.21■□□□□ 0.19
ACTN1-205ENST00000538545 EPSTI1Q96J88 318 aa16.21■□□□□ 0.19
ACTN1-205ENST00000538545 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.21■□□□□ 0.19
ACTN1-205ENST00000538545 CDC25AP30304 524 aa16.2■□□□□ 0.18
ACTN1-205ENST00000538545 DPCR1Q3MIW9 517 aa16.2■□□□□ 0.18
ACTN1-205ENST00000538545 KCTD1Q719H9 257 aa16.2■□□□□ 0.18
ACTN1-205ENST00000538545 TOP1P11387 765 aaKnown RBP16.2■□□□□ 0.18
ACTN1-205ENST00000538545 RESP18Q5W5W9 173 aa16.2■□□□□ 0.18
ACTN1-205ENST00000538545 CASP1P29466 404 aa16.19■□□□□ 0.18
ACTN1-205ENST00000538545 RRP1BQ14684 758 aaKnown RBP16.19■□□□□ 0.18
ACTN1-205ENST00000538545 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.19■□□□□ 0.18
ACTN1-205ENST00000538545 KCNH3Q9ULD8 1083 aa16.19■□□□□ 0.18
ACTN1-205ENST00000538545 HPSEQ9Y251 543 aa16.19■□□□□ 0.18
ACTN1-205ENST00000538545 SIPA1L1O43166 1804 aa16.19■□□□□ 0.18
ACTN1-205ENST00000538545 A0A087X0B3 334 aa16.19■□□□□ 0.18
ACTN1-205ENST00000538545 TRIM75PA6NK02 468 aa16.19■□□□□ 0.18
ACTN1-205ENST00000538545 POLR2DO15514 142 aaKnown RBP16.19■□□□□ 0.18
ACTN1-205ENST00000538545 IGSF3O75054 1194 aa16.19■□□□□ 0.18
ACTN1-205ENST00000538545 HLA-DOAP06340 250 aa16.19■□□□□ 0.18
ACTN1-205ENST00000538545 FOXP4Q8IVH2 680 aaPredicted RBP16.19■□□□□ 0.18
ACTN1-205ENST00000538545 COA7Q96BR5 231 aa16.19■□□□□ 0.18
ACTN1-205ENST00000538545 ESPNB1AK53 854 aa16.18■□□□□ 0.18
ACTN1-205ENST00000538545 PTPREP23469 700 aa16.18■□□□□ 0.18
ACTN1-205ENST00000538545 PTGDRQ13258 359 aa16.18■□□□□ 0.18
ACTN1-205ENST00000538545 KIAA1468Q9P260 1216 aa16.18■□□□□ 0.18
ACTN1-205ENST00000538545 STXBP3O00186 592 aa16.18■□□□□ 0.18
ACTN1-205ENST00000538545 TAL1P17542 331 aaPredicted RBP16.18■□□□□ 0.18
ACTN1-205ENST00000538545 SEPT2Q15019 361 aa16.18■□□□□ 0.18
ACTN1-205ENST00000538545 INF2Q27J81 1249 aa16.18■□□□□ 0.18
ACTN1-205ENST00000538545 TTC38Q5R3I4 469 aa16.18■□□□□ 0.18
ACTN1-205ENST00000538545 BLIDQ8IZY5 108 aa16.18■□□□□ 0.18
ACTN1-205ENST00000538545 JMYQ8N9B5 988 aa16.18■□□□□ 0.18
ACTN1-205ENST00000538545 STAMQ92783 540 aa16.18■□□□□ 0.18
ACTN1-205ENST00000538545 VWA3AA6NCI4 1184 aa16.18■□□□□ 0.18
ACTN1-205ENST00000538545 CUTAO60888 179 aa16.18■□□□□ 0.18
ACTN1-205ENST00000538545 PTMAP06454 111 aaKnown RBP16.18■□□□□ 0.18
ACTN1-205ENST00000538545 SNAP25P60880 206 aa16.18■□□□□ 0.18
ACTN1-205ENST00000538545 METTL16Q86W50 562 aaKnown RBP16.18■□□□□ 0.18
ACTN1-205ENST00000538545 BRMS1Q9HCU9 246 aa16.18■□□□□ 0.18
ACTN1-205ENST00000538545 MYH4Q9Y623 1939 aa16.17■□□□□ 0.18
ACTN1-205ENST00000538545 PRR29P0C7W0 189 aa16.17■□□□□ 0.18
ACTN1-205ENST00000538545 VEZTQ9HBM0 779 aa16.17■□□□□ 0.18
ACTN1-205ENST00000538545 SERTAD1Q9UHV2 236 aa16.17■□□□□ 0.18
ACTN1-205ENST00000538545 SERPINA10Q9UK55 444 aa16.17■□□□□ 0.18
ACTN1-205ENST00000538545 IGKV6D-41A0A0C4DH26 115 aa16.17■□□□□ 0.18
ACTN1-205ENST00000538545 NAPAP54920 295 aa16.17■□□□□ 0.18
ACTN1-205ENST00000538545 IL17AQ16552 155 aa16.17■□□□□ 0.18
ACTN1-205ENST00000538545 NUP88Q99567 741 aaPredicted RBP16.17■□□□□ 0.18
ACTN1-205ENST00000538545 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.17■□□□□ 0.18
ACTN1-205ENST00000538545 TTLL1O95922 423 aa16.16■□□□□ 0.18
ACTN1-205ENST00000538545 EGFRP00533 1210 aa16.16■□□□□ 0.18
ACTN1-205ENST00000538545 CERKLQ49MI3 558 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-205ENST00000538545 CNNM3Q8NE01 707 aa16.16■□□□□ 0.18
ACTN1-205ENST00000538545 TMEM260Q9NX78 707 aa16.16■□□□□ 0.18
ACTN1-205ENST00000538545 PCDHA6Q9UN73 950 aa16.16■□□□□ 0.18
ACTN1-205ENST00000538545 PCDHA8Q9Y5H6 950 aa16.16■□□□□ 0.18
ACTN1-205ENST00000538545 EEF2P13639 858 aaKnown RBP16.16■□□□□ 0.18
ACTN1-205ENST00000538545 IQCB1Q15051 598 aa16.16■□□□□ 0.18
ACTN1-205ENST00000538545 STX1AQ16623 288 aa16.16■□□□□ 0.18
ACTN1-205ENST00000538545 CCDC96Q2M329 555 aa16.16■□□□□ 0.18
ACTN1-205ENST00000538545 UVSSAQ2YD98 709 aa16.16■□□□□ 0.18
ACTN1-205ENST00000538545 RBM26Q5T8P6 1007 aaKnown RBP16.16■□□□□ 0.18
ACTN1-205ENST00000538545 RSBN1LQ6PCB5 846 aaPredicted RBP16.16■□□□□ 0.18
ACTN1-205ENST00000538545 AOPEPQ8N6M6 819 aa16.16■□□□□ 0.18
ACTN1-205ENST00000538545 UIMC1Q96RL1 719 aa16.16■□□□□ 0.18
ACTN1-205ENST00000538545 CSRNP1Q96S65 589 aa16.16■□□□□ 0.18
ACTN1-205ENST00000538545 BARHL2Q9NY43 387 aa16.16■□□□□ 0.18
ACTN1-205ENST00000538545 CTAGE5O15320 804 aa16.15■□□□□ 0.18
ACTN1-205ENST00000538545 CCDC178Q5BJE1 867 aa16.15■□□□□ 0.18
ACTN1-205ENST00000538545 MIGA2Q7L4E1 593 aa16.15■□□□□ 0.18
ACTN1-205ENST00000538545 IDI2Q9BXS1 227 aa16.15■□□□□ 0.18
ACTN1-205ENST00000538545 TTC12Q9H892 705 aaPredicted RBP16.15■□□□□ 0.18
ACTN1-205ENST00000538545 PI4KBQ9UBF8 816 aa16.15■□□□□ 0.18
ACTN1-205ENST00000538545 BIN2Q9UBW5 565 aaPredicted RBP16.15■□□□□ 0.18
ACTN1-205ENST00000538545 PCDHA4Q9UN74 947 aa16.15■□□□□ 0.18
ACTN1-205ENST00000538545 BCS1LQ9Y276 419 aa16.15■□□□□ 0.18
ACTN1-205ENST00000538545 SRPRBQ9Y5M8 271 aaKnown RBP16.15■□□□□ 0.18
ACTN1-205ENST00000538545 GNAQP50148 359 aa16.15■□□□□ 0.18
ACTN1-205ENST00000538545 JAKMIP3Q5VZ66 844 aa16.15■□□□□ 0.18
ACTN1-205ENST00000538545 CCDC84Q86UT8 332 aaPredicted RBP16.15■□□□□ 0.18
ACTN1-205ENST00000538545 SIAH1Q8IUQ4 282 aa16.15■□□□□ 0.18
ACTN1-205ENST00000538545 RTKN2Q8IZC4 609 aa16.15■□□□□ 0.18
ACTN1-205ENST00000538545 RGS22Q8NE09 1264 aa16.15■□□□□ 0.18
ACTN1-205ENST00000538545 SUPT20HQ8NEM7 779 aa16.15■□□□□ 0.18
ACTN1-205ENST00000538545 SYMPKQ92797 1274 aaKnown RBP16.15■□□□□ 0.18
ACTN1-205ENST00000538545 DHX58Q96C10 678 aa16.15■□□□□ 0.18
ACTN1-205ENST00000538545 SMCO2A6NFE2 343 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 CXCL9Q07325 125 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 DHX40Q8IX18 779 aaKnown RBP16.14■□□□□ 0.17
ACTN1-205ENST00000538545 TRIM34Q9BYJ4 488 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 TMEM60Q9H2L4 133 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 PIM2Q9P1W9 311 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 SMCHD1A6NHR9 2005 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 PP2D1A8MPX8 630 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 PPP1R11O60927 126 aaPredicted RBP16.14■□□□□ 0.17
ACTN1-205ENST00000538545 AFMP43652 599 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 NOVP48745 357 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 NBPF9Q3BBW0 867 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 HSP90AA4PQ58FG1 418 aa16.14■□□□□ 0.17
ACTN1-205ENST00000538545 CC2D2BQ6DHV5 1058 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms