RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 RRP1BQ14684 758 aaKnown RBP12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 GPATCH4Q5T3I0 446 aaKnown RBP12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 USP17L2Q6R6M4 530 aa12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 PHKBQ93100 1093 aa12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 MKL1Q969V6 931 aa12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 RRP36Q96EU6 259 aaKnown RBP12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 ELP3Q9H9T3 547 aa12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 RBM27Q9P2N5 1060 aaKnown RBP12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 ZNF112Q9UJU3 913 aa12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 HPS5Q9UPZ3 1129 aa12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 MYH4Q9Y623 1939 aa12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 TRPM7Q96QT4 1865 aa12.36□□□□□ -0.43
TNFRSF1A-211ENST00000538363 TRIM75PA6NK02 468 aa12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 UBE2Q2LH0YL09 131 aa12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 JAK2O60674 1132 aa12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 DTNBO60941 627 aa12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 CELF2O95319 508 aaKnown RBP12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 BMP3P12645 472 aa12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 CDC27P30260 824 aa12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 GUCY1A2P33402 732 aa12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 TROAPQ12815 778 aa12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 SPP2Q13103 211 aa12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 SHROOM1Q2M3G4 852 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 FOXD4L5Q5VV16 416 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 MCTP1Q6DN14 999 aa12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 CCDC84Q86UT8 332 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 SPICE1Q8N0Z3 855 aa12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 CMTR1Q8N1G2 835 aaKnown RBP12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 SP7Q8TDD2 431 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 FOXD4L4Q8WXT5 416 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 C8orf76Q96K31 380 aa12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 CIZ1Q9ULV3 898 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 V9GY48 417 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1A-211ENST00000538363 ATAD5Q96QE3 1844 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 C19orf81C9J6K1 198 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 PLEKHA8P1O95397 391 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 DEXIO95424 95 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 FMNL1O95466 1100 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 PDHBP11177 359 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 IFNAR1P17181 557 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 PTPRAP18433 802 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 ECE1P42892 770 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 JAG1P78504 1218 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 SAFBQ15424 915 aaKnown RBP eCLIP12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 TMTC3Q6ZXV5 915 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 KCTD1Q719H9 257 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 HOMER1Q86YM7 354 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 ZNF280CQ8ND82 737 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 NSUN7Q8NE18 718 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 GMCL1P1Q8NEA9 526 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 ACER1Q8TDN7 264 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 CHURC1Q8WUH1 139 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 ALG1Q9BT22 464 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 TANGO6Q9C0B7 1094 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 UBA5Q9GZZ9 404 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 GBA2Q9HCG7 927 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 SYNPO2Q9UMS6 1093 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 TMX2Q9Y320 296 aa12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 WDR33Q9C0J8 1336 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1A-211ENST00000538363 PAPPA2Q9BXP8 1791 aa12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 TMEM232C9JQI7 657 aa12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 KIF3CO14782 793 aa12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 PRPF3O43395 683 aaKnown RBP12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 NDUFB10O96000 172 aa12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 FKBP1BP68106 108 aa12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 ZNF543Q08ER8 600 aa12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 MTMR2Q13614 643 aa12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 VGLL4Q14135 290 aa12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 NOL9Q5SY16 702 aaKnown RBP12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 MOB2Q70IA6 237 aa12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 OTUD5Q96G74 571 aa12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 RNF26Q9BY78 433 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 VCPKMTQ9H867 229 aa12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 BRMS1Q9HCU9 246 aa12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 MAD2L2Q9UI95 211 aa12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 SSC5DA1L4H1 1573 aa12.33□□□□□ -0.44
TNFRSF1A-211ENST00000538363 PALM3A6NDB9 673 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1A-211ENST00000538363 STX6O43752 255 aa12.32□□□□□ -0.44
TNFRSF1A-211ENST00000538363 TOMM70O94826 608 aa12.32□□□□□ -0.44
TNFRSF1A-211ENST00000538363 SLC16A2P36021 539 aa12.32□□□□□ -0.44
TNFRSF1A-211ENST00000538363 FAM83BQ5T0W9 1011 aa12.32□□□□□ -0.44
TNFRSF1A-211ENST00000538363 GADL1Q6ZQY3 521 aa12.32□□□□□ -0.44
TNFRSF1A-211ENST00000538363 ERO1BQ86YB8 467 aa12.32□□□□□ -0.44
TNFRSF1A-211ENST00000538363 STAG2Q8N3U4 1231 aa12.32□□□□□ -0.44
TNFRSF1A-211ENST00000538363 SRBD1Q8N5C6 995 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-211ENST00000538363 RBM46Q8TBY0 533 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-211ENST00000538363 GMCL1Q96IK5 515 aa12.32□□□□□ -0.44
TNFRSF1A-211ENST00000538363 NUP88Q99567 741 aaPredicted RBP12.32□□□□□ -0.44
TNFRSF1A-211ENST00000538363 WDR18Q9BV38 432 aa12.32□□□□□ -0.44
TNFRSF1A-211ENST00000538363 ATP6V1DQ9Y5K8 247 aa12.32□□□□□ -0.44
TNFRSF1A-211ENST00000538363 DOCK1Q14185 1865 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 hCG_1642624A0A1W2PR95 340 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 A0A1W2PRG0 241 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 CTDNEP1O95476 244 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 SYT1P21579 422 aa12.31□□□□□ -0.44
TNFRSF1A-211ENST00000538363 SMARCA1P28370 1054 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms