RNA–Protein interactions for RNA: ENST00000538315.5

MRPS35-203, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 2 BASIC

Gene MRPS35, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-203ENST00000538315 TMTC2Q8N394 836 aa13.22□□□□□ -0.29
MRPS35-203ENST00000538315 PNMA3Q9UL41 463 aa13.22□□□□□ -0.29
MRPS35-203ENST00000538315 TRPA1O75762 1119 aa13.21□□□□□ -0.3
MRPS35-203ENST00000538315 BMP3P12645 472 aa13.21□□□□□ -0.3
MRPS35-203ENST00000538315 HOXA7P31268 230 aaPredicted RBP13.21□□□□□ -0.3
MRPS35-203ENST00000538315 LIFRP42702 1097 aa13.21□□□□□ -0.3
MRPS35-203ENST00000538315 IKQ13123 557 aaPredicted RBP13.21□□□□□ -0.3
MRPS35-203ENST00000538315 KCTD1Q719H9 257 aa13.21□□□□□ -0.3
MRPS35-203ENST00000538315 CATIPQ7Z7H3 387 aa13.21□□□□□ -0.3
MRPS35-203ENST00000538315 SMCR8Q8TEV9 937 aaPredicted RBP13.21□□□□□ -0.3
MRPS35-203ENST00000538315 DCAF4Q8WV16 495 aa13.21□□□□□ -0.3
MRPS35-203ENST00000538315 GMCL1Q96IK5 515 aa13.21□□□□□ -0.3
MRPS35-203ENST00000538315 ZCCHC17Q9NP64 241 aaKnown RBP13.21□□□□□ -0.3
MRPS35-203ENST00000538315 PDRG1Q9NUG6 133 aa13.21□□□□□ -0.3
MRPS35-203ENST00000538315 NAP1L2Q9ULW6 460 aaPredicted RBP13.21□□□□□ -0.3
MRPS35-203ENST00000538315 SLC45A1Q9Y2W3 748 aa13.21□□□□□ -0.3
MRPS35-203ENST00000538315 FLOT1O75955 427 aa13.2□□□□□ -0.3
MRPS35-203ENST00000538315 CYP2C8P10632 490 aa13.2□□□□□ -0.3
MRPS35-203ENST00000538315 PDHBP11177 359 aa13.2□□□□□ -0.3
MRPS35-203ENST00000538315 SYNE3Q6ZMZ3 975 aa13.2□□□□□ -0.3
MRPS35-203ENST00000538315 CATSPERGQ6ZRH7 1159 aa13.2□□□□□ -0.3
MRPS35-203ENST00000538315 NUP133Q8WUM0 1156 aa13.2□□□□□ -0.3
MRPS35-203ENST00000538315 BRF1Q92994 677 aa13.2□□□□□ -0.3
MRPS35-203ENST00000538315 TBC1D32Q96NH3 1257 aa13.2□□□□□ -0.3
MRPS35-203ENST00000538315 PARK7Q99497 189 aaKnown RBP13.2□□□□□ -0.3
MRPS35-203ENST00000538315 ASCC2Q9H1I8 757 aaPredicted RBP13.2□□□□□ -0.3
MRPS35-203ENST00000538315 RNF186Q9NXI6 227 aa13.2□□□□□ -0.3
MRPS35-203ENST00000538315 FRMPD2Q68DX3 1309 aaPredicted RBP13.2□□□□□ -0.3
MRPS35-203ENST00000538315 PARP14Q460N5 1801 aa13.2□□□□□ -0.3
MRPS35-203ENST00000538315 TMEM232C9JQI7 657 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 NEK4P51957 841 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 ZNF654Q8IZM8 581 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 IL17RAQ96F46 866 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 MYL10Q9BUA6 226 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 ZFYVE28Q9HCC9 887 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 GPCPD1Q9NPB8 672 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 SLC12A7Q9Y666 1083 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 KLF18A0A0U1RQI7 1052 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 CA12O43570 354 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 TBC1D8O95759 1140 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 GOLGA8HP0CJ92 632 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 APOBRQ0VD83 1088 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 CRHR2Q13324 411 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 SGMS1Q86VZ5 419 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 MICU3Q86XE3 530 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 RAB11FIP4Q86YS3 637 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 JMYQ8N9B5 988 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 P2RX7Q99572 595 aaKnown RBP13.19□□□□□ -0.3
MRPS35-203ENST00000538315 FBXO28Q9NVF7 368 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 WBP1LQ9NX94 342 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 FEM1BQ9UK73 627 aa13.19□□□□□ -0.3
MRPS35-203ENST00000538315 RLFQ13129 1914 aa13.18□□□□□ -0.3
MRPS35-203ENST00000538315 DDAH1O94760 285 aa13.18□□□□□ -0.3
MRPS35-203ENST00000538315 PARP1P09874 1014 aaKnown RBP13.18□□□□□ -0.3
MRPS35-203ENST00000538315 SNHG28P0DPA3 235 aa13.18□□□□□ -0.3
MRPS35-203ENST00000538315 RXRAP19793 462 aa13.18□□□□□ -0.3
MRPS35-203ENST00000538315 STAT2P52630 851 aa13.18□□□□□ -0.3
MRPS35-203ENST00000538315 HERVK_113P62684 666 aa13.18□□□□□ -0.3
MRPS35-203ENST00000538315 ZNF543Q08ER8 600 aa13.18□□□□□ -0.3
MRPS35-203ENST00000538315 COG2Q14746 738 aa13.18□□□□□ -0.3
MRPS35-203ENST00000538315 GPATCH4Q5T3I0 446 aaKnown RBP13.18□□□□□ -0.3
MRPS35-203ENST00000538315 APOA5Q6Q788 366 aa13.18□□□□□ -0.3
MRPS35-203ENST00000538315 KIFC2Q96AC6 838 aa13.18□□□□□ -0.3
MRPS35-203ENST00000538315 HOXC10Q9NYD6 342 aa13.18□□□□□ -0.3
MRPS35-203ENST00000538315 COL11A1P12107 1806 aaPredicted RBP13.17□□□□□ -0.3
MRPS35-203ENST00000538315 BAZ2BQ9UIF8 2168 aaKnown RBP13.17□□□□□ -0.3
MRPS35-203ENST00000538315 CALM1P0DP23 149 aa13.17□□□□□ -0.3
MRPS35-203ENST00000538315 CALM2P0DP24 149 aa13.17□□□□□ -0.3
MRPS35-203ENST00000538315 CALM3P0DP25 149 aa13.17□□□□□ -0.3
MRPS35-203ENST00000538315 TROAPQ12815 778 aa13.17□□□□□ -0.3
MRPS35-203ENST00000538315 TOB2Q14106 344 aaPredicted RBP13.17□□□□□ -0.3
MRPS35-203ENST00000538315 ASPRV1Q53RT3 343 aa13.17□□□□□ -0.3
MRPS35-203ENST00000538315 CCDC144CPQ8IYA2 1237 aa13.17□□□□□ -0.3
MRPS35-203ENST00000538315 CTCFLQ8NI51 663 aaPredicted RBP13.17□□□□□ -0.3
MRPS35-203ENST00000538315 CHURC1Q8WUH1 139 aa13.17□□□□□ -0.3
MRPS35-203ENST00000538315 KIF2CQ99661 725 aa13.17□□□□□ -0.3
MRPS35-203ENST00000538315 SLF1Q9BQI6 1058 aa13.17□□□□□ -0.3
MRPS35-203ENST00000538315 AGXT2Q9BYV1 514 aa13.17□□□□□ -0.3
MRPS35-203ENST00000538315 SAGE1Q9NXZ1 904 aa13.17□□□□□ -0.3
MRPS35-203ENST00000538315 TSKSQ9UJT2 592 aa13.17□□□□□ -0.3
MRPS35-203ENST00000538315 BRPF3Q9ULD4 1205 aa13.17□□□□□ -0.3
MRPS35-203ENST00000538315 MYH6P13533 1939 aa13.17□□□□□ -0.3
MRPS35-203ENST00000538315 SPDYE16A6NNV3 312 aaPredicted RBP13.16□□□□□ -0.3
MRPS35-203ENST00000538315 ZBTB43O43298 467 aa13.16□□□□□ -0.3
MRPS35-203ENST00000538315 TLR2O60603 784 aa13.16□□□□□ -0.3
MRPS35-203ENST00000538315 DSG3P32926 999 aa13.16□□□□□ -0.3
MRPS35-203ENST00000538315 SLC16A2P36021 539 aa13.16□□□□□ -0.3
MRPS35-203ENST00000538315 TTBK2Q6IQ55 1244 aa13.16□□□□□ -0.3
MRPS35-203ENST00000538315 NOL8Q76FK4 1167 aaKnown RBP13.16□□□□□ -0.3
MRPS35-203ENST00000538315 FAM160B2Q86V87 743 aa13.16□□□□□ -0.3
MRPS35-203ENST00000538315 FBXL16Q8N461 479 aa13.16□□□□□ -0.3
MRPS35-203ENST00000538315 PRPF38AQ8NAV1 312 aaKnown RBP13.16□□□□□ -0.3
MRPS35-203ENST00000538315 ATG4CQ96DT6 458 aa13.16□□□□□ -0.3
MRPS35-203ENST00000538315 LARP6Q9BRS8 491 aaKnown RBP13.16□□□□□ -0.3
MRPS35-203ENST00000538315 PAGR1Q9BTK6 254 aa13.16□□□□□ -0.3
MRPS35-203ENST00000538315 CPA4Q9UI42 421 aa13.16□□□□□ -0.3
MRPS35-203ENST00000538315 PPP1R9AQ9ULJ8 1098 aa13.16□□□□□ -0.3
MRPS35-203ENST00000538315 CTDP1Q9Y5B0 961 aaPredicted RBP13.16□□□□□ -0.3
MRPS35-203ENST00000538315 MYPNQ86TC9 1320 aa13.16□□□□□ -0.3
MRPS35-203ENST00000538315 GOLGA8BA8MQT2 603 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms